Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0902
         (510 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF308302-1|AAG48269.1|  431|Homo sapiens serologically defined b...    30   4.1  
BC067796-1|AAH67796.1|  380|Homo sapiens chromosome 8 open readi...    29   7.1  
BC012379-1|AAH12379.1|  292|Homo sapiens C8orf76 protein protein.      29   7.1  
AK222660-1|BAD96380.1|  380|Homo sapiens hypothetical protein FL...    29   7.1  
AK027731-1|BAB55327.1|  380|Homo sapiens protein ( Homo sapiens ...    29   7.1  
AM183303-1|CAJ66088.1|  418|Homo sapiens autogenous vein graft r...    29   9.4  

>AF308302-1|AAG48269.1|  431|Homo sapiens serologically defined
           breast cancer antigen NY-BR-96 protein.
          Length = 431

 Score = 30.3 bits (65), Expect = 4.1
 Identities = 23/76 (30%), Positives = 30/76 (39%)
 Frame = -3

Query: 229 SPAHSTVR*NNLSTCLRIPLLRPSNGKWYSSPYTHLQRHNIDTYYRHCSPL*VLYLSHHS 50
           SP+ S    + LS  L     RPSNG W S PY      +   +   C           S
Sbjct: 313 SPSRSVAN-SGLSDSLTTSTPRPSNGDWPSHPYHRTFSPHFHHFVEQCLQRNPDARPSAS 371

Query: 49  KSVNNSILFKINRRYS 2
             +N+S   +I RR S
Sbjct: 372 TLLNHSFFKQIKRRAS 387


>BC067796-1|AAH67796.1|  380|Homo sapiens chromosome 8 open reading
           frame 76 protein.
          Length = 380

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 13/40 (32%), Positives = 25/40 (62%)
 Frame = -1

Query: 120 RGTTSTHITATVLHYEFFIYHTIQNR*IIVFCLKSIDAIH 1
           + T + H+T TVL+ +  I  ++QN    +FCL+ + ++H
Sbjct: 122 KATNTDHLT-TVLYLQLAICSSLQNLEKTIFCLQKLISLH 160


>BC012379-1|AAH12379.1|  292|Homo sapiens C8orf76 protein protein.
          Length = 292

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 13/40 (32%), Positives = 25/40 (62%)
 Frame = -1

Query: 120 RGTTSTHITATVLHYEFFIYHTIQNR*IIVFCLKSIDAIH 1
           + T + H+T TVL+ +  I  ++QN    +FCL+ + ++H
Sbjct: 90  KATNTDHLT-TVLYLQLAICSSLQNLEKTIFCLQKLISLH 128


>AK222660-1|BAD96380.1|  380|Homo sapiens hypothetical protein
           FLJ14825 variant protein.
          Length = 380

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 13/40 (32%), Positives = 25/40 (62%)
 Frame = -1

Query: 120 RGTTSTHITATVLHYEFFIYHTIQNR*IIVFCLKSIDAIH 1
           + T + H+T TVL+ +  I  ++QN    +FCL+ + ++H
Sbjct: 122 KATNTDHLT-TVLYLQLAICSSLQNLEKTIFCLQKLISLH 160


>AK027731-1|BAB55327.1|  380|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14825 fis, clone OVARC1000781. ).
          Length = 380

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 13/40 (32%), Positives = 25/40 (62%)
 Frame = -1

Query: 120 RGTTSTHITATVLHYEFFIYHTIQNR*IIVFCLKSIDAIH 1
           + T + H+T TVL+ +  I  ++QN    +FCL+ + ++H
Sbjct: 122 KATNTDHLT-TVLYLQLAICSSLQNLEKTIFCLQKLISLH 160


>AM183303-1|CAJ66088.1|  418|Homo sapiens autogenous vein graft
           remodeling associated protein 2 protein.
          Length = 418

 Score = 29.1 bits (62), Expect = 9.4
 Identities = 20/81 (24%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
 Frame = -1

Query: 240 TVRALRHTQLYVETIFQHVSVY--LFFAHPMVSGIQVLIHTFRGTTSTHITATVLHYEFF 67
           +V   +H ++Y   +  HV ++  +   H M     V +HT+R  T+TH+  T +H E  
Sbjct: 268 SVEHRKHIEMYRRWVNIHVYMHTHVMIRHGM-KYTSVYLHTYRCMTNTHV-YTQMHLECV 325

Query: 66  IYHTIQNR*IIVFCLKSIDAI 4
             +  ++      C+KS++ +
Sbjct: 326 CMYVSES-----VCVKSVECV 341


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,249,470
Number of Sequences: 237096
Number of extensions: 1399085
Number of successful extensions: 3006
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3006
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4763295768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)