Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0902
         (510 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC084152-2|AAM69073.2| 1571|Caenorhabditis elegans Hypothetical ...    28   3.4  
AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical ...    27   6.0  
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr...    27   7.9  
Z37983-3|CAA86056.1|  621|Caenorhabditis elegans Hypothetical pr...    27   7.9  
AF100306-8|ABB88213.1|  860|Caenorhabditis elegans Hypothetical ...    27   7.9  
AF100306-7|ABB88214.1|  895|Caenorhabditis elegans Hypothetical ...    27   7.9  
AC090999-1|AAK26146.1|  390|Caenorhabditis elegans Hypothetical ...    27   7.9  

>AC084152-2|AAM69073.2| 1571|Caenorhabditis elegans Hypothetical
            protein Y102A11A.3 protein.
          Length = 1571

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +1

Query: 190  LKDCFNVQLSVPESSDGGIC-EVA*PSSVTP 279
            L+ C N+    PESSD  IC EV  P++ TP
Sbjct: 1470 LETCQNIIDLTPESSDSSICAEVFVPTNSTP 1500


>AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical
           protein Y113G7B.12 protein.
          Length = 1042

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +1

Query: 46  ILNGVIDKELIMENSGGNMCRCCASEGVYKDLNTT 150
           IL+ +ID +LI  NSG   C        +KD N+T
Sbjct: 709 ILDLMIDDKLISRNSGKASCFASIFSSKFKDQNST 743


>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
            F47A4.2 protein.
          Length = 3498

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -3

Query: 202  NNLSTCLRIPLLRPSNGKWYSSPYTHLQRHNIDTYYR 92
            N + TCL+   ++ S   +  S YT LQR  +  ++R
Sbjct: 1909 NMILTCLQCEKMQQSKDVFLQSLYTQLQRETLRDHHR 1945


>Z37983-3|CAA86056.1|  621|Caenorhabditis elegans Hypothetical
           protein B0393.3 protein.
          Length = 621

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
 Frame = -2

Query: 497 LNLIPDCHRLGDVLRLNWNLVEFWFRQSVVCD---VGICTVIVSKSF-HFNY 354
           L L P CHRL D ++ +   VEF   +   CD   +     +  K+  H NY
Sbjct: 57  LKLRPVCHRLSDSVKRSVKSVEFLRDELDYCDDAKISFFLAVYGKNVQHMNY 108


>AF100306-8|ABB88213.1|  860|Caenorhabditis elegans Hypothetical
           protein T24C4.6a protein.
          Length = 860

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 17/65 (26%), Positives = 31/65 (47%)
 Frame = -2

Query: 254 TSHMPPSELSGTLNCTLKQSFNMSPYTSSSPIQW*VVFKSLYTPSEAQHRHILPPLFSIM 75
           TS     + +G L   L +S+ +  + +S+P+      ++L+   EA HRH+      I 
Sbjct: 435 TSLQMYKDRAGLLQNVLNESYQLYRFGNSNPLTRHT--EALHLVLEAMHRHLADSTLQIA 492

Query: 74  SSLSI 60
            S S+
Sbjct: 493 GSASL 497


>AF100306-7|ABB88214.1|  895|Caenorhabditis elegans Hypothetical
           protein T24C4.6b protein.
          Length = 895

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 17/65 (26%), Positives = 31/65 (47%)
 Frame = -2

Query: 254 TSHMPPSELSGTLNCTLKQSFNMSPYTSSSPIQW*VVFKSLYTPSEAQHRHILPPLFSIM 75
           TS     + +G L   L +S+ +  + +S+P+      ++L+   EA HRH+      I 
Sbjct: 435 TSLQMYKDRAGLLQNVLNESYQLYRFGNSNPLTRHT--EALHLVLEAMHRHLADSTLQIA 492

Query: 74  SSLSI 60
            S S+
Sbjct: 493 GSASL 497


>AC090999-1|AAK26146.1|  390|Caenorhabditis elegans Hypothetical
           protein Y82E9BR.8 protein.
          Length = 390

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = +1

Query: 103 CRCCASEGVYKDLNTTYHWMGEEEVYGDMLKDCFNVQLSVPESSDG 240
           CRC AS  +Y + N  Y+ +G++  Y   +KD   V  +V  S+DG
Sbjct: 202 CRC-ASMDLYNE-NAGYY-IGQDSFYQSYVKDNVFVPANVTLSADG 244


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,699,105
Number of Sequences: 27780
Number of extensions: 211759
Number of successful extensions: 583
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 583
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)