Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0898
         (543 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB7905 Cluster: PREDICTED: similar to Cad99C CG3...    38   0.20 
UniRef50_A0G6Y2 Cluster: Putative uncharacterized protein; n=1; ...    33   4.3  
UniRef50_Q21MZ9 Cluster: Putative uncharacterized protein; n=1; ...    33   5.6  
UniRef50_A7RP63 Cluster: Predicted protein; n=1; Nematostella ve...    33   5.6  
UniRef50_Q5A444 Cluster: Putative uncharacterized protein TRS130...    33   5.6  
UniRef50_A0YJV1 Cluster: Methyl-accepting chemotaxis protein; n=...    32   7.4  
UniRef50_A0E1N7 Cluster: Chromosome undetermined scaffold_73, wh...    32   7.4  
UniRef50_Q5KCE2 Cluster: Expressed protein; n=1; Filobasidiella ...    32   7.4  
UniRef50_A0BXZ5 Cluster: Chromosome undetermined scaffold_136, w...    32   9.8  
UniRef50_A7EWX7 Cluster: Putative uncharacterized protein; n=1; ...    32   9.8  

>UniRef50_UPI0000DB7905 Cluster: PREDICTED: similar to Cad99C
            CG31009-PA, partial; n=3; Endopterygota|Rep: PREDICTED:
            similar to Cad99C CG31009-PA, partial - Apis mellifera
          Length = 1556

 Score = 37.5 bits (83), Expect = 0.20
 Identities = 19/32 (59%), Positives = 24/32 (75%), Gaps = 4/32 (12%)
 Frame = +1

Query: 109  NVQYLSKDNGE----RSPTLSETATTARASSV 192
            NV Y++KD+GE    +SP  SE ATTARASS+
Sbjct: 1437 NVSYITKDHGESTGQQSPVSSEAATTARASSI 1468


>UniRef50_A0G6Y2 Cluster: Putative uncharacterized protein; n=1;
           Burkholderia phymatum STM815|Rep: Putative
           uncharacterized protein - Burkholderia phymatum STM815
          Length = 80

 Score = 33.1 bits (72), Expect = 4.3
 Identities = 21/67 (31%), Positives = 30/67 (44%)
 Frame = -2

Query: 500 FCQMSRCRCQRLSAFRVYRRTPLWVEFSSCDYSR*SSYLMWRLIIHHRHCYCWHGAMSRE 321
           F Q +R R  RL+AF+V+ R    V++     S      +W L+I   H    H A  R 
Sbjct: 6   FSQQTRFRMARLAAFKVHDRNVHTVQYGVAGVSLFPVSRLWHLVIAKTHIDSVHDA--RT 63

Query: 320 RCSTLAS 300
            C  + S
Sbjct: 64  LCKAITS 70


>UniRef50_Q21MZ9 Cluster: Putative uncharacterized protein; n=1;
           Saccharophagus degradans 2-40|Rep: Putative
           uncharacterized protein - Saccharophagus degradans
           (strain 2-40 / ATCC 43961 / DSM 17024)
          Length = 259

 Score = 32.7 bits (71), Expect = 5.6
 Identities = 19/53 (35%), Positives = 30/53 (56%)
 Frame = +1

Query: 76  QSKQITRSIYTNVQYLSKDNGERSPTLSETATTARASSVNENGGTLNKLHNSH 234
           ++ + T+S+ ++V   S D+GE S T +ETA TA  SS      +    HN+H
Sbjct: 190 ENAKFTQSLSSDV---SADSGENSKTKAETALTANISSAFALKASFTVNHNTH 239


>UniRef50_A7RP63 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 262

 Score = 32.7 bits (71), Expect = 5.6
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -2

Query: 464 SAFRVYRRTPLWVEFSSCDYSR*SSYLMWRLIIHHRH 354
           SA++ Y R+P W +FS  +Y    +Y   R  + HRH
Sbjct: 5   SAYQRYYRSPKWDDFSVEEYKARMNYRQQRRSVEHRH 41


>UniRef50_Q5A444 Cluster: Putative uncharacterized protein TRS130;
           n=2; Candida albicans|Rep: Putative uncharacterized
           protein TRS130 - Candida albicans (Yeast)
          Length = 1264

 Score = 32.7 bits (71), Expect = 5.6
 Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
 Frame = +2

Query: 59  DLQLDFS---PNKSRVQYTQTFNIYPKIMVREVQRYRKQRRQLEP 184
           DL L+F+   P KS    ++ +N+Y ++M+ +++   K R Q+ P
Sbjct: 47  DLSLEFTEEIPKKSESSTSENYNVYTRLMLIKIESLDKYRSQVRP 91


>UniRef50_A0YJV1 Cluster: Methyl-accepting chemotaxis protein; n=2;
           Lyngbya sp. PCC 8106|Rep: Methyl-accepting chemotaxis
           protein - Lyngbya sp. PCC 8106
          Length = 484

 Score = 32.3 bits (70), Expect = 7.4
 Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
 Frame = +1

Query: 79  SKQITRSIYTNVQYLSKDNGERSPTLSETATTA--RASSVNENGGTLNKLHNS 231
           S+ IT ++   +Q +S+ + E +  L E   TA  +AS+VNE   T+N+L  S
Sbjct: 207 SQSITNTLKKTLQVVSESSTEIAAALEEQERTANQQASAVNETTTTMNELSTS 259


>UniRef50_A0E1N7 Cluster: Chromosome undetermined scaffold_73, whole
            genome shotgun sequence; n=4; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_73, whole genome shotgun
            sequence - Paramecium tetraurelia
          Length = 1605

 Score = 32.3 bits (70), Expect = 7.4
 Identities = 15/43 (34%), Positives = 26/43 (60%)
 Frame = +2

Query: 158  RKQRRQLEPRASMKTGVL*TNSTTATTILSRTSVHSAQHTDIE 286
            +KQ++ ++ R  +++ V+ T STTA  +  +  V   QH DIE
Sbjct: 918  QKQQKDVQNRKLIQSQVVQTKSTTACCVKQKKKVSQNQHKDIE 960


>UniRef50_Q5KCE2 Cluster: Expressed protein; n=1; Filobasidiella
           neoformans|Rep: Expressed protein - Cryptococcus
           neoformans (Filobasidiella neoformans)
          Length = 330

 Score = 32.3 bits (70), Expect = 7.4
 Identities = 18/55 (32%), Positives = 28/55 (50%)
 Frame = +2

Query: 149 QRYRKQRRQLEPRASMKTGVL*TNSTTATTILSRTSVHSAQHTDIEPKMPNSQAL 313
           ++ RK+ ++ E RA  + G     STTA T L+ T + S     I    P+S A+
Sbjct: 100 KKRRKKEKEKERRAKRRQGAELVPSTTAPTHLATTDLSSVLLRSIRESFPSSSAI 154


>UniRef50_A0BXZ5 Cluster: Chromosome undetermined scaffold_136,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_136,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 562

 Score = 31.9 bits (69), Expect = 9.8
 Identities = 21/76 (27%), Positives = 40/76 (52%)
 Frame = +2

Query: 92  RVQYTQTFNIYPKIMVREVQRYRKQRRQLEPRASMKTGVL*TNSTTATTILSRTSVHSAQ 271
           ++ Y + F +   I++ ++  + KQ  Q E    +KT V+  N+  +T  ++   +   Q
Sbjct: 286 QICYNEDFELQKNILLLDIY-FEKQSNQKEIDQIIKTKVI-QNNLISTFDINDEDI---Q 340

Query: 272 HTDIEPKMPNSQALNN 319
           H   E K+PN Q++NN
Sbjct: 341 HECDELKIPNKQSMNN 356


>UniRef50_A7EWX7 Cluster: Putative uncharacterized protein; n=1;
           Sclerotinia sclerotiorum 1980|Rep: Putative
           uncharacterized protein - Sclerotinia sclerotiorum 1980
          Length = 911

 Score = 31.9 bits (69), Expect = 9.8
 Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
 Frame = +2

Query: 218 NSTTATTILSRTSVHSAQHTDIE-PKMPNSQALNN 319
           +ST A T LS T ++ A HTD+E PK  + ++++N
Sbjct: 826 SSTLAPTTLSPTLIYKANHTDLEPPKSRSGRSVSN 860


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 554,856,654
Number of Sequences: 1657284
Number of extensions: 10646948
Number of successful extensions: 30222
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 29180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30206
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34989170748
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)