Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0898
         (543 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0792 - 23191120-23191313,23191419-23191775,23192027-231921...    31   0.59 
02_03_0238 + 16730444-16730448,16730484-16730586,16732043-167320...    29   3.2  
02_03_0304 + 17516268-17516468,17517606-17517668,17518516-17518728     28   4.2  
06_03_0282 + 19142841-19143344,19144653-19144814,19146308-19146388     28   5.5  

>12_02_0792 -
           23191120-23191313,23191419-23191775,23192027-23192108,
           23192186-23193097,23193190-23193346,23193540-23193694,
           23194667-23194819,23195334-23195627,23195711-23195896,
           23196062-23196662,23196868-23196992,23197101-23197197,
           23197299-23197411,23198129-23198233
          Length = 1176

 Score = 31.1 bits (67), Expect = 0.59
 Identities = 17/58 (29%), Positives = 30/58 (51%)
 Frame = +1

Query: 82  KQITRSIYTNVQYLSKDNGERSPTLSETATTARASSVNENGGTLNKLHNSHYDPIANK 255
           K+I   I +N  Y+ KDN + S  LSE  T   +++    G T ++  +S  + + +K
Sbjct: 787 KKIDNPIPSNAPYV-KDNADSSEQLSEIRTVVNSTTSTSKGQTSDRTVSSQLEDLLDK 843


>02_03_0238 +
           16730444-16730448,16730484-16730586,16732043-16732099,
           16732198-16732346,16732450-16732545,16732620-16732695,
           16732810-16732883,16732991-16733408
          Length = 325

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 21/61 (34%), Positives = 28/61 (45%)
 Frame = +1

Query: 7   PRTEI*NTGTQYGGR*RGSAIRLQSKQITRSIYTNVQYLSKDNGERSPTLSETATTARAS 186
           PR E  N GT + GR RG+A  L + + T  + T     S   G  +      A T R+S
Sbjct: 204 PREEHKNAGTGWMGRGRGNA-ALAAAETTTQLLTASSSSSSSYGHGAAGSRTAAETQRSS 262

Query: 187 S 189
           S
Sbjct: 263 S 263


>02_03_0304 + 17516268-17516468,17517606-17517668,17518516-17518728
          Length = 158

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +1

Query: 73  LQSKQITRSIYTNVQYLSKDNGERSPTLSETATT 174
           L+ + +TR  Y  +Q ++K+    SP + E ATT
Sbjct: 119 LKGETLTRKRYERIQPVNKEGTPESPPVKEQATT 152


>06_03_0282 + 19142841-19143344,19144653-19144814,19146308-19146388
          Length = 248

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -3

Query: 367 STTDIVIVGTGQCPESVVQRLRVRHLRFNVCVLRAMDAC 251
           STTD+    T +     V+R R + +  N+ VLR++  C
Sbjct: 125 STTDVAAATTPKTAHIAVERNRRKQMNENLAVLRSLMPC 163


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,067,459
Number of Sequences: 37544
Number of extensions: 297174
Number of successful extensions: 720
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 720
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1210221432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)