Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0898
(543 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014134-908|AAF52239.3| 2267|Drosophila melanogaster CG14023-PA... 30 2.4
M17119-1|AAA28313.1| 345|Drosophila melanogaster protein ( D.me... 29 4.1
BT022151-1|AAY51546.1| 345|Drosophila melanogaster IP01419p pro... 29 4.1
AL024453-1|CAA19657.1| 345|Drosophila melanogaster EG:198A6.1,F... 29 4.1
AE014298-28|AAF45499.1| 345|Drosophila melanogaster CG3827-PA p... 29 4.1
AY075303-1|AAL68170.1| 334|Drosophila melanogaster AT31457p pro... 28 7.2
AY069478-1|AAL39623.1| 536|Drosophila melanogaster LD21616p pro... 28 7.2
AE013599-1767|AAM71007.1| 412|Drosophila melanogaster CG6315-PB... 28 7.2
AE013599-1766|AAF58334.1| 536|Drosophila melanogaster CG6315-PA... 28 7.2
AE013599-1616|AAF58439.2| 334|Drosophila melanogaster CG13322-P... 28 7.2
AE013599-1615|AAM68619.1| 334|Drosophila melanogaster CG13322-P... 28 7.2
AE013599-1614|AAM68618.1| 334|Drosophila melanogaster CG13322-P... 28 7.2
AF298216-1|AAG30224.1| 2130|Drosophila melanogaster DNA polymera... 28 9.5
AF298215-1|AAG30223.1| 2130|Drosophila melanogaster DNA polymera... 28 9.5
AE013599-501|AAF59191.2| 2130|Drosophila melanogaster CG1925-PA ... 28 9.5
>AE014134-908|AAF52239.3| 2267|Drosophila melanogaster CG14023-PA
protein.
Length = 2267
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 159 GNSDDSSSLERQ*KRGYSEQTPQQPL 236
G + ++S ERQ KR YS+Q PQQ L
Sbjct: 1270 GQNQEASIDERQLKRSYSDQPPQQLL 1295
>M17119-1|AAA28313.1| 345|Drosophila melanogaster protein (
D.melanogaster scutegene encoding nerve differentiation,
complete cds. ).
Length = 345
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Frame = +2
Query: 161 KQRRQLEPRASMKTGVL*TNSTTATTILSRTSVHSAQH--TDIEPKMPNSQALNNALGTL 334
K +M + VL TN T TTI S T + QH P +P N GT+
Sbjct: 2 KNNNNTTKSTTMSSSVLSTNETFPTTINSATKIFRYQHIMPAPSPLIPGGNQ-NQPAGTM 60
Query: 335 P 337
P
Sbjct: 61 P 61
>BT022151-1|AAY51546.1| 345|Drosophila melanogaster IP01419p
protein.
Length = 345
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Frame = +2
Query: 161 KQRRQLEPRASMKTGVL*TNSTTATTILSRTSVHSAQH--TDIEPKMPNSQALNNALGTL 334
K +M + VL TN T TTI S T + QH P +P N GT+
Sbjct: 2 KNNNNTTKSTTMSSSVLSTNETFPTTINSATKIFRYQHIMPAPSPLIPGGNQ-NQPAGTM 60
Query: 335 P 337
P
Sbjct: 61 P 61
>AL024453-1|CAA19657.1| 345|Drosophila melanogaster
EG:198A6.1,FBgn0004170;sc protein.
Length = 345
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Frame = +2
Query: 161 KQRRQLEPRASMKTGVL*TNSTTATTILSRTSVHSAQH--TDIEPKMPNSQALNNALGTL 334
K +M + VL TN T TTI S T + QH P +P N GT+
Sbjct: 2 KNNNNTTKSTTMSSSVLSTNETFPTTINSATKIFRYQHIMPAPSPLIPGGNQ-NQPAGTM 60
Query: 335 P 337
P
Sbjct: 61 P 61
>AE014298-28|AAF45499.1| 345|Drosophila melanogaster CG3827-PA
protein.
Length = 345
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Frame = +2
Query: 161 KQRRQLEPRASMKTGVL*TNSTTATTILSRTSVHSAQH--TDIEPKMPNSQALNNALGTL 334
K +M + VL TN T TTI S T + QH P +P N GT+
Sbjct: 2 KNNNNTTKSTTMSSSVLSTNETFPTTINSATKIFRYQHIMPAPSPLIPGGNQ-NQPAGTM 60
Query: 335 P 337
P
Sbjct: 61 P 61
>AY075303-1|AAL68170.1| 334|Drosophila melanogaster AT31457p
protein.
Length = 334
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 133 NGERSPTLSETATTARASSVNENGGTLNKLHNSHYDP 243
NG +PT+S+ TTA S+ + TL+KL + + DP
Sbjct: 92 NGS-APTMSDIITTAVQESMEVSHQTLSKLFDVYKDP 127
>AY069478-1|AAL39623.1| 536|Drosophila melanogaster LD21616p
protein.
Length = 536
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +1
Query: 82 KQITRSIYTNVQYLSKDNGERSPTLSETATTARASSVNENGGTLNKLHNSHYDP-IANKR 258
+Q ++ +Q L K+N + + + A++ T+NKL H D +AN
Sbjct: 289 QQELKTTRDRIQTLEKENAQLKQAIKDEVVAPAAATNGGTNTTINKLETIHEDACMANNP 348
Query: 259 P*RATHRH*TEDAELASVEQ 318
+ T + ++A+V Q
Sbjct: 349 TNPDCYNGNTNNEQIAAVPQ 368
>AE013599-1767|AAM71007.1| 412|Drosophila melanogaster CG6315-PB,
isoform B protein.
Length = 412
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +1
Query: 82 KQITRSIYTNVQYLSKDNGERSPTLSETATTARASSVNENGGTLNKLHNSHYDP-IANKR 258
+Q ++ +Q L K+N + + + A++ T+NKL H D +AN
Sbjct: 165 QQELKTTRDRIQTLEKENAQLKQAIKDEVVAPAAATNGGTNTTINKLETIHEDACMANNP 224
Query: 259 P*RATHRH*TEDAELASVEQ 318
+ T + ++A+V Q
Sbjct: 225 TNPDCYNGNTNNEQIAAVPQ 244
>AE013599-1766|AAF58334.1| 536|Drosophila melanogaster CG6315-PA,
isoform A protein.
Length = 536
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +1
Query: 82 KQITRSIYTNVQYLSKDNGERSPTLSETATTARASSVNENGGTLNKLHNSHYDP-IANKR 258
+Q ++ +Q L K+N + + + A++ T+NKL H D +AN
Sbjct: 289 QQELKTTRDRIQTLEKENAQLKQAIKDEVVAPAAATNGGTNTTINKLETIHEDACMANNP 348
Query: 259 P*RATHRH*TEDAELASVEQ 318
+ T + ++A+V Q
Sbjct: 349 TNPDCYNGNTNNEQIAAVPQ 368
>AE013599-1616|AAF58439.2| 334|Drosophila melanogaster CG13322-PC,
isoform C protein.
Length = 334
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 133 NGERSPTLSETATTARASSVNENGGTLNKLHNSHYDP 243
NG +PT+S+ TTA S+ + TL+KL + + DP
Sbjct: 92 NGS-APTMSDIITTAVQESMEVSHQTLSKLFDVYKDP 127
>AE013599-1615|AAM68619.1| 334|Drosophila melanogaster CG13322-PB,
isoform B protein.
Length = 334
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 133 NGERSPTLSETATTARASSVNENGGTLNKLHNSHYDP 243
NG +PT+S+ TTA S+ + TL+KL + + DP
Sbjct: 92 NGS-APTMSDIITTAVQESMEVSHQTLSKLFDVYKDP 127
>AE013599-1614|AAM68618.1| 334|Drosophila melanogaster CG13322-PA,
isoform A protein.
Length = 334
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 133 NGERSPTLSETATTARASSVNENGGTLNKLHNSHYDP 243
NG +PT+S+ TTA S+ + TL+KL + + DP
Sbjct: 92 NGS-APTMSDIITTAVQESMEVSHQTLSKLFDVYKDP 127
>AF298216-1|AAG30224.1| 2130|Drosophila melanogaster DNA polymerase
zeta catalyticsubunit protein.
Length = 2130
Score = 27.9 bits (59), Expect = 9.5
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Frame = +2
Query: 14 PRYETQVLNMAVDDADLQLDFSPNKSRVQYTQTF----NIYPKIMVR---EVQRYRKQR- 169
PR+ + N+ A L +FSP++S V Y F N+Y V EV ++R+
Sbjct: 141 PRFVRRAANLLQSGAILSKNFSPHESHVPYILQFMIDYNLYGMSYVHVPLEVLKFRRNHD 200
Query: 170 RQLEPRASMKTGVL*TNSTTATTI 241
+ P A++K L + TTA +
Sbjct: 201 DDVIPYANVKQAQL-LDITTAKKV 223
>AF298215-1|AAG30223.1| 2130|Drosophila melanogaster DNA polymerase
zeta catalyticsubunit protein.
Length = 2130
Score = 27.9 bits (59), Expect = 9.5
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Frame = +2
Query: 14 PRYETQVLNMAVDDADLQLDFSPNKSRVQYTQTF----NIYPKIMVR---EVQRYRKQR- 169
PR+ + N+ A L +FSP++S V Y F N+Y V EV ++R+
Sbjct: 141 PRFVRRAANLLQSGAILSKNFSPHESHVPYILQFMIDYNLYGMSYVHVPLEVLKFRRNHD 200
Query: 170 RQLEPRASMKTGVL*TNSTTATTI 241
+ P A++K L + TTA +
Sbjct: 201 DDVIPYANVKQAQL-LDITTAKKV 223
>AE013599-501|AAF59191.2| 2130|Drosophila melanogaster CG1925-PA
protein.
Length = 2130
Score = 27.9 bits (59), Expect = 9.5
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Frame = +2
Query: 14 PRYETQVLNMAVDDADLQLDFSPNKSRVQYTQTF----NIYPKIMVR---EVQRYRKQR- 169
PR+ + N+ A L +FSP++S V Y F N+Y V EV ++R+
Sbjct: 141 PRFVRRAANLLQSGAILSKNFSPHESHVPYILQFMIDYNLYGMSYVHVPLEVLKFRRNHD 200
Query: 170 RQLEPRASMKTGVL*TNSTTATTI 241
+ P A++K L + TTA +
Sbjct: 201 DDVIPYANVKQAQL-LDITTAKKV 223
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,410,474
Number of Sequences: 53049
Number of extensions: 520654
Number of successful extensions: 1613
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1613
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2074444800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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