Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0896
(532 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL137800-8|CAC19687.1| 151|Homo sapiens actin related protein 2... 66 6e-11
AL137800-7|CAI19481.1| 135|Homo sapiens actin related protein 2... 66 6e-11
AF017807-1|AAB70561.1| 151|Homo sapiens Arp2/3 complex 16kDa su... 66 6e-11
AF006088-1|AAB64193.1| 151|Homo sapiens p16-Arc protein. 66 6e-11
AF087842-1|AAP97155.1| 152|Homo sapiens ARC16-2 protein. 65 2e-10
BC002418-1|AAH02418.1| 153|Homo sapiens actin related protein 2... 63 7e-10
BC000798-1|AAH00798.1| 153|Homo sapiens actin related protein 2... 63 7e-10
BC000018-1|AAH00018.1| 153|Homo sapiens actin related protein 2... 63 7e-10
AL354928-9|CAI39641.1| 153|Homo sapiens actin related protein 2... 63 7e-10
BC057237-1|AAH57237.1| 154|Homo sapiens ARPC5 protein protein. 58 1e-08
AL137800-9|CAI19482.1| 154|Homo sapiens actin related protein 2... 58 1e-08
>AL137800-8|CAC19687.1| 151|Homo sapiens actin related protein 2/3
complex, subunit 5, 16kDa protein.
Length = 151
Score = 66.5 bits (155), Expect = 6e-11
Identities = 33/72 (45%), Positives = 46/72 (63%)
Frame = +2
Query: 8 GPTGPDEGEVCSLLNQGRHIDALKLVLNNAPLGSSNQQVKENALTLTLKVLLAIKSAQIE 187
G GPDEGEV S L QG AL+ L N P+ + +Q VK+ A ++ LKVL++ K+ IE
Sbjct: 33 GQAGPDEGEVDSCLRQGNMTAALQAALKNPPINTKSQAVKDRAGSIVLKVLISFKANDIE 92
Query: 188 EAVGSLSLDDID 223
+AV SL + +D
Sbjct: 93 KAVQSLDKNGVD 104
Score = 46.8 bits (106), Expect = 5e-05
Identities = 23/47 (48%), Positives = 29/47 (61%)
Frame = +3
Query: 225 ILMXXXL*RFEFPSEGSSGHLLLWHDKAYSVGGLGCIARVLSDRMRV 365
+LM FE PS+ SS LL WH+KA + GG+G I RVL+ R V
Sbjct: 105 LLMKYIYKGFESPSDNSSAMLLQWHEKALAAGGVGSIVRVLTARKTV 151
>AL137800-7|CAI19481.1| 135|Homo sapiens actin related protein 2/3
complex, subunit 5, 16kDa protein.
Length = 135
Score = 66.5 bits (155), Expect = 6e-11
Identities = 33/72 (45%), Positives = 46/72 (63%)
Frame = +2
Query: 8 GPTGPDEGEVCSLLNQGRHIDALKLVLNNAPLGSSNQQVKENALTLTLKVLLAIKSAQIE 187
G GPDEGEV S L QG AL+ L N P+ + +Q VK+ A ++ LKVL++ K+ IE
Sbjct: 33 GQAGPDEGEVDSCLRQGNMTAALQAALKNPPINTKSQAVKDRAGSIVLKVLISFKANDIE 92
Query: 188 EAVGSLSLDDID 223
+AV SL + +D
Sbjct: 93 KAVQSLDKNGVD 104
>AF017807-1|AAB70561.1| 151|Homo sapiens Arp2/3 complex 16kDa
subunit protein.
Length = 151
Score = 66.5 bits (155), Expect = 6e-11
Identities = 33/72 (45%), Positives = 46/72 (63%)
Frame = +2
Query: 8 GPTGPDEGEVCSLLNQGRHIDALKLVLNNAPLGSSNQQVKENALTLTLKVLLAIKSAQIE 187
G GPDEGEV S L QG AL+ L N P+ + +Q VK+ A ++ LKVL++ K+ IE
Sbjct: 33 GQAGPDEGEVDSCLRQGNMTAALQAALKNPPINTKSQAVKDRAGSIVLKVLISFKANDIE 92
Query: 188 EAVGSLSLDDID 223
+AV SL + +D
Sbjct: 93 KAVQSLDKNGVD 104
Score = 46.8 bits (106), Expect = 5e-05
Identities = 23/47 (48%), Positives = 29/47 (61%)
Frame = +3
Query: 225 ILMXXXL*RFEFPSEGSSGHLLLWHDKAYSVGGLGCIARVLSDRMRV 365
+LM FE PS+ SS LL WH+KA + GG+G I RVL+ R V
Sbjct: 105 LLMKYIYKGFESPSDNSSAMLLQWHEKALAAGGVGSIVRVLTARKTV 151
>AF006088-1|AAB64193.1| 151|Homo sapiens p16-Arc protein.
Length = 151
Score = 66.5 bits (155), Expect = 6e-11
Identities = 33/72 (45%), Positives = 46/72 (63%)
Frame = +2
Query: 8 GPTGPDEGEVCSLLNQGRHIDALKLVLNNAPLGSSNQQVKENALTLTLKVLLAIKSAQIE 187
G GPDEGEV S L QG AL+ L N P+ + +Q VK+ A ++ LKVL++ K+ IE
Sbjct: 33 GQAGPDEGEVDSCLRQGNMTAALQAALKNPPINTKSQAVKDRAGSIVLKVLISFKANDIE 92
Query: 188 EAVGSLSLDDID 223
+AV SL + +D
Sbjct: 93 KAVQSLDKNGVD 104
Score = 46.8 bits (106), Expect = 5e-05
Identities = 23/47 (48%), Positives = 29/47 (61%)
Frame = +3
Query: 225 ILMXXXL*RFEFPSEGSSGHLLLWHDKAYSVGGLGCIARVLSDRMRV 365
+LM FE PS+ SS LL WH+KA + GG+G I RVL+ R V
Sbjct: 105 LLMKYIYKGFESPSDNSSAMLLQWHEKALAAGGVGSIVRVLTARKTV 151
>AF087842-1|AAP97155.1| 152|Homo sapiens ARC16-2 protein.
Length = 152
Score = 64.9 bits (151), Expect = 2e-10
Identities = 34/73 (46%), Positives = 44/73 (60%)
Frame = +2
Query: 5 AGPTGPDEGEVCSLLNQGRHIDALKLVLNNAPLGSSNQQVKENALTLTLKVLLAIKSAQI 184
A TGPD EV LL QG + A L N+P+ + NQ VKE A + LKVL KS++I
Sbjct: 33 AARTGPDPSEVDGLLRQGDMLRAFHAALRNSPVNTKNQAVKERAQGVVLKVLTNFKSSEI 92
Query: 185 EEAVGSLSLDDID 223
E+AV SL + +D
Sbjct: 93 EQAVQSLDRNGVD 105
Score = 48.4 bits (110), Expect = 2e-05
Identities = 25/47 (53%), Positives = 30/47 (63%)
Frame = +3
Query: 225 ILMXXXL*RFEFPSEGSSGHLLLWHDKAYSVGGLGCIARVLSDRMRV 365
+LM FE P+E SS LL WH+KA +VGGLG I RVL+ R V
Sbjct: 106 LLMKYIYKGFEKPTENSSAVLLQWHEKALAVGGLGSIIRVLTARKTV 152
>BC002418-1|AAH02418.1| 153|Homo sapiens actin related protein 2/3
complex, subunit 5-like protein.
Length = 153
Score = 62.9 bits (146), Expect = 7e-10
Identities = 33/73 (45%), Positives = 43/73 (58%)
Frame = +2
Query: 5 AGPTGPDEGEVCSLLNQGRHIDALKLVLNNAPLGSSNQQVKENALTLTLKVLLAIKSAQI 184
A GPD EV LL QG + A L N+P+ + NQ VKE A + LKVL KS++I
Sbjct: 34 AAEPGPDPSEVDGLLRQGDMLRAFHAALRNSPVNTKNQAVKERAQGVVLKVLTNFKSSEI 93
Query: 185 EEAVGSLSLDDID 223
E+AV SL + +D
Sbjct: 94 EQAVQSLDRNGVD 106
Score = 48.4 bits (110), Expect = 2e-05
Identities = 25/47 (53%), Positives = 30/47 (63%)
Frame = +3
Query: 225 ILMXXXL*RFEFPSEGSSGHLLLWHDKAYSVGGLGCIARVLSDRMRV 365
+LM FE P+E SS LL WH+KA +VGGLG I RVL+ R V
Sbjct: 107 LLMKYIYKGFEKPTENSSAVLLQWHEKALAVGGLGSIIRVLTARKTV 153
>BC000798-1|AAH00798.1| 153|Homo sapiens actin related protein 2/3
complex, subunit 5-like protein.
Length = 153
Score = 62.9 bits (146), Expect = 7e-10
Identities = 33/73 (45%), Positives = 43/73 (58%)
Frame = +2
Query: 5 AGPTGPDEGEVCSLLNQGRHIDALKLVLNNAPLGSSNQQVKENALTLTLKVLLAIKSAQI 184
A GPD EV LL QG + A L N+P+ + NQ VKE A + LKVL KS++I
Sbjct: 34 AAEPGPDPSEVDGLLRQGDMLRAFHAALRNSPVNTKNQAVKERAQGVVLKVLTNFKSSEI 93
Query: 185 EEAVGSLSLDDID 223
E+AV SL + +D
Sbjct: 94 EQAVQSLDRNGVD 106
Score = 48.4 bits (110), Expect = 2e-05
Identities = 25/47 (53%), Positives = 30/47 (63%)
Frame = +3
Query: 225 ILMXXXL*RFEFPSEGSSGHLLLWHDKAYSVGGLGCIARVLSDRMRV 365
+LM FE P+E SS LL WH+KA +VGGLG I RVL+ R V
Sbjct: 107 LLMKYIYKGFEKPTENSSAVLLQWHEKALAVGGLGSIIRVLTARKTV 153
>BC000018-1|AAH00018.1| 153|Homo sapiens actin related protein 2/3
complex, subunit 5-like protein.
Length = 153
Score = 62.9 bits (146), Expect = 7e-10
Identities = 33/73 (45%), Positives = 43/73 (58%)
Frame = +2
Query: 5 AGPTGPDEGEVCSLLNQGRHIDALKLVLNNAPLGSSNQQVKENALTLTLKVLLAIKSAQI 184
A GPD EV LL QG + A L N+P+ + NQ VKE A + LKVL KS++I
Sbjct: 34 AAEPGPDPSEVDGLLRQGDMLRAFHAALRNSPVNTKNQAVKERAQGVVLKVLTNFKSSEI 93
Query: 185 EEAVGSLSLDDID 223
E+AV SL + +D
Sbjct: 94 EQAVQSLDRNGVD 106
Score = 48.4 bits (110), Expect = 2e-05
Identities = 25/47 (53%), Positives = 30/47 (63%)
Frame = +3
Query: 225 ILMXXXL*RFEFPSEGSSGHLLLWHDKAYSVGGLGCIARVLSDRMRV 365
+LM FE P+E SS LL WH+KA +VGGLG I RVL+ R V
Sbjct: 107 LLMKYIYKGFEKPTENSSAVLLQWHEKALAVGGLGSIIRVLTARKTV 153
>AL354928-9|CAI39641.1| 153|Homo sapiens actin related protein 2/3
complex, subunit 5-like protein.
Length = 153
Score = 62.9 bits (146), Expect = 7e-10
Identities = 33/73 (45%), Positives = 43/73 (58%)
Frame = +2
Query: 5 AGPTGPDEGEVCSLLNQGRHIDALKLVLNNAPLGSSNQQVKENALTLTLKVLLAIKSAQI 184
A GPD EV LL QG + A L N+P+ + NQ VKE A + LKVL KS++I
Sbjct: 34 AAEPGPDPSEVDGLLRQGDMLRAFHAALRNSPVNTKNQAVKERAQGVVLKVLTNFKSSEI 93
Query: 185 EEAVGSLSLDDID 223
E+AV SL + +D
Sbjct: 94 EQAVQSLDRNGVD 106
Score = 48.4 bits (110), Expect = 2e-05
Identities = 25/47 (53%), Positives = 30/47 (63%)
Frame = +3
Query: 225 ILMXXXL*RFEFPSEGSSGHLLLWHDKAYSVGGLGCIARVLSDRMRV 365
+LM FE P+E SS LL WH+KA +VGGLG I RVL+ R V
Sbjct: 107 LLMKYIYKGFEKPTENSSAVLLQWHEKALAVGGLGSIIRVLTARKTV 153
>BC057237-1|AAH57237.1| 154|Homo sapiens ARPC5 protein protein.
Length = 154
Score = 58.4 bits (135), Expect = 1e-08
Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Frame = +2
Query: 8 GPTGPDEGEVCSLLNQ---GRHIDALKLVLNNAPLGSSNQQVKENALTLTLKVLLAIKSA 178
G GPDEGEV S L G AL+ L N P+ + +Q VK+ A ++ LKVL++ K+
Sbjct: 33 GQAGPDEGEVDSCLRHSITGNMTAALQAALKNPPINTKSQAVKDRAGSIVLKVLISFKAN 92
Query: 179 QIEEAVGSLSLDDID 223
IE+AV SL + +D
Sbjct: 93 DIEKAVQSLDKNGVD 107
Score = 46.8 bits (106), Expect = 5e-05
Identities = 23/47 (48%), Positives = 29/47 (61%)
Frame = +3
Query: 225 ILMXXXL*RFEFPSEGSSGHLLLWHDKAYSVGGLGCIARVLSDRMRV 365
+LM FE PS+ SS LL WH+KA + GG+G I RVL+ R V
Sbjct: 108 LLMKYIYKGFESPSDNSSAMLLQWHEKALAAGGVGSIVRVLTARKTV 154
>AL137800-9|CAI19482.1| 154|Homo sapiens actin related protein 2/3
complex, subunit 5, 16kDa protein.
Length = 154
Score = 58.4 bits (135), Expect = 1e-08
Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Frame = +2
Query: 8 GPTGPDEGEVCSLLNQ---GRHIDALKLVLNNAPLGSSNQQVKENALTLTLKVLLAIKSA 178
G GPDEGEV S L G AL+ L N P+ + +Q VK+ A ++ LKVL++ K+
Sbjct: 33 GQAGPDEGEVDSCLRHSITGNMTAALQAALKNPPINTKSQAVKDRAGSIVLKVLISFKAN 92
Query: 179 QIEEAVGSLSLDDID 223
IE+AV SL + +D
Sbjct: 93 DIEKAVQSLDKNGVD 107
Score = 46.8 bits (106), Expect = 5e-05
Identities = 23/47 (48%), Positives = 29/47 (61%)
Frame = +3
Query: 225 ILMXXXL*RFEFPSEGSSGHLLLWHDKAYSVGGLGCIARVLSDRMRV 365
+LM FE PS+ SS LL WH+KA + GG+G I RVL+ R V
Sbjct: 108 LLMKYIYKGFESPSDNSSAMLLQWHEKALAAGGVGSIVRVLTARKTV 154
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,723,881
Number of Sequences: 237096
Number of extensions: 1318680
Number of successful extensions: 2328
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2326
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5160237082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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