Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0894
(505 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61254 Cluster: 60S ribosomal protein L26; n=96; Eukary... 157 2e-37
UniRef50_UPI0000D8B882 Cluster: similar to 60S ribosomal protein... 135 6e-31
UniRef50_A5KBD9 Cluster: 60S ribosomal protein L26, putative; n=... 110 2e-23
UniRef50_A2QXI7 Cluster: Contig An11c0300, complete genome; n=2;... 106 3e-22
UniRef50_Q5ZDH6 Cluster: Putative ribosomal protein L26; n=1; Or... 100 2e-20
UniRef50_P05743 Cluster: 60S ribosomal protein L26-A; n=92; Euka... 99 5e-20
UniRef50_A0BIZ3 Cluster: Chromosome undetermined scaffold_11, wh... 96 5e-19
UniRef50_Q00Y51 Cluster: Putative L24 ribosomal protein; n=1; Os... 95 1e-18
UniRef50_UPI0000499C5A Cluster: 60S ribosomal protein L26; n=2; ... 86 4e-16
UniRef50_A7QPA2 Cluster: Chromosome chr1 scaffold_136, whole gen... 81 1e-14
UniRef50_Q7R3B5 Cluster: GLP_111_22147_22554; n=1; Giardia lambl... 80 3e-14
UniRef50_P54038 Cluster: 50S ribosomal protein L24P; n=14; Archa... 76 4e-13
UniRef50_Q8TW19 Cluster: 50S ribosomal protein L24P; n=17; Archa... 75 7e-13
UniRef50_UPI0000DD790D Cluster: PREDICTED: similar to 60S riboso... 73 4e-12
UniRef50_Q0IUK5 Cluster: Os11g0151300 protein; n=1; Oryza sativa... 69 6e-11
UniRef50_P60663 Cluster: 50S ribosomal protein L24P; n=1; Nanoar... 68 1e-10
UniRef50_A3H985 Cluster: Ribosomal protein L24; n=1; Caldivirga ... 65 7e-10
UniRef50_Q8SRE6 Cluster: 60S RIBOSOMAL PROTEIN L26; n=1; Encepha... 63 4e-09
UniRef50_A1RWS4 Cluster: Ribosomal protein L24; n=1; Thermofilum... 62 5e-09
UniRef50_O05633 Cluster: 50S ribosomal protein L24P; n=1; Sulfol... 60 2e-08
UniRef50_Q98RW9 Cluster: 60S ribosomal protein L26; n=1; Guillar... 58 9e-08
UniRef50_A2DCS2 Cluster: Ribosomal protein L24, putative; n=2; T... 56 3e-07
UniRef50_Q8PV39 Cluster: 50S ribosomal protein L24P; n=9; Euryar... 53 4e-06
UniRef50_A0RVY4 Cluster: Ribosomal protein L24; n=1; Cenarchaeum... 50 3e-05
UniRef50_P10972 Cluster: 50S ribosomal protein L24P; n=6; Euryar... 47 2e-04
UniRef50_A7DSY3 Cluster: KOW domain protein; n=1; Candidatus Nit... 44 0.001
UniRef50_A4YCX7 Cluster: KOW domain protein; n=1; Metallosphaera... 44 0.001
UniRef50_Q97BW5 Cluster: 50S ribosomal protein L24P; n=2; Thermo... 43 0.003
UniRef50_Q6L1B6 Cluster: Large subunit ribosomal protein L24P; n... 43 0.005
UniRef50_UPI00005A08CE Cluster: PREDICTED: similar to 60S riboso... 42 0.006
UniRef50_Q30Z53 Cluster: 50S ribosomal protein L24; n=9; Bacteri... 41 0.018
UniRef50_Q0IQ32 Cluster: Os12g0150000 protein; n=1; Oryza sativa... 38 0.13
UniRef50_Q2JIL6 Cluster: 50S ribosomal protein L24; n=25; Bacter... 37 0.22
UniRef50_Q673R7 Cluster: Ribosomal protein L24; n=2; environment... 37 0.30
UniRef50_Q4S8H7 Cluster: Chromosome 2 SCAF14705, whole genome sh... 36 0.39
UniRef50_Q64E17 Cluster: Ribosomal protein L21E; n=3; environmen... 36 0.39
UniRef50_Q56435 Cluster: 50S ribosomal protein L24; n=18; Bacter... 36 0.39
UniRef50_Q5C6X2 Cluster: Putative uncharacterized protein; n=1; ... 33 4.8
UniRef50_Q9XD25 Cluster: 50S ribosomal protein L24; n=11; Bacter... 33 4.8
UniRef50_Q7RN67 Cluster: DHHC zinc finger domain, putative; n=5;... 32 6.4
UniRef50_O77355 Cluster: Putative uncharacterized protein MAL3P4... 32 6.4
UniRef50_Q9ZCR6 Cluster: 50S ribosomal protein L24; n=60; Bacter... 32 6.4
UniRef50_O67569 Cluster: 50S ribosomal protein L24; n=10; Bacter... 32 6.4
UniRef50_O46905 Cluster: Chloroplast 50S ribosomal protein L24; ... 32 6.4
UniRef50_Q90X38 Cluster: G patch domain and KOW motifs-containin... 32 6.4
UniRef50_Q8YLR0 Cluster: Alr5236 protein; n=1; Nostoc sp. PCC 71... 32 8.5
UniRef50_A4CYH5 Cluster: Putative uncharacterized protein; n=1; ... 32 8.5
UniRef50_Q1KVT3 Cluster: DNA-directed RNA polymerase; n=1; Scene... 32 8.5
UniRef50_Q4YND5 Cluster: Putative uncharacterized protein; n=1; ... 32 8.5
>UniRef50_P61254 Cluster: 60S ribosomal protein L26; n=96;
Eukaryota|Rep: 60S ribosomal protein L26 - Homo sapiens
(Human)
Length = 145
Score = 157 bits (380), Expect = 2e-37
Identities = 71/89 (79%), Positives = 82/89 (92%)
Frame = +1
Query: 4 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 183
MKFN VTS R KNRKRHF+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 184 HYKGQQVGKVMQVYRKKFVVYIERFKEKR 270
HYKGQQ+GKV+QVYRKK+V+YIER + ++
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREK 89
Score = 72.9 bits (171), Expect = 4e-12
Identities = 34/53 (64%), Positives = 43/53 (81%)
Frame = +3
Query: 255 IQREKANGATAYVGIHXSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 413
+QREKANG T +VGIH SK VI +LK++KDRK IL+R+AK R +GK+KGKY
Sbjct: 85 VQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSR--QVGKEKGKY 135
>UniRef50_UPI0000D8B882 Cluster: similar to 60S ribosomal protein
L26 (Silica-induced gene 20 protein) (SIG-20)
(LOC668913), mRNA; n=2; Eutheria|Rep: similar to 60S
ribosomal protein L26 (Silica-induced gene 20 protein)
(SIG-20) (LOC668913), mRNA - Mus musculus
Length = 139
Score = 135 bits (326), Expect = 6e-31
Identities = 61/89 (68%), Positives = 76/89 (85%)
Frame = +1
Query: 4 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 183
MKFN VTS R K HF+APSHI R +MSSPLSKELRQK+NV+SMP +KDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSMKHKWHFNAPSHILRKIMSSPLSKELRQKYNVQSMPTQKDDEVQVVRG 60
Query: 184 HYKGQQVGKVMQVYRKKFVVYIERFKEKR 270
HY+GQQ+GKV+QVYRKK+V+YI++ + ++
Sbjct: 61 HYEGQQIGKVVQVYRKKYVIYIKQVEREK 89
Score = 55.2 bits (127), Expect = 8e-07
Identities = 29/54 (53%), Positives = 39/54 (72%)
Frame = +3
Query: 252 EIQREKANGATAYVGIHXSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 413
+++REKANG T VGIH SK VI +LK+ +DRK IL+R+ +GK+KGKY
Sbjct: 84 QVEREKANGTTVRVGIHPSKVVITRLKL-EDRKKILERK-------VGKEKGKY 129
>UniRef50_A5KBD9 Cluster: 60S ribosomal protein L26, putative; n=9;
Eukaryota|Rep: 60S ribosomal protein L26, putative -
Plasmodium vivax
Length = 156
Score = 110 bits (265), Expect = 2e-23
Identities = 48/90 (53%), Positives = 72/90 (80%)
Frame = +1
Query: 1 RMKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVR 180
+MKFNKQ++S+RRK RK HF+AP+ +RR +MSS LSKELR K+ +++P+RKDDEV + R
Sbjct: 29 KMKFNKQISSARRKMRKAHFTAPAGLRRKIMSSKLSKELRLKYKTRALPVRKDDEVLICR 88
Query: 181 GHYKGQQVGKVMQVYRKKFVVYIERFKEKR 270
GH G++ GKV+++ RK+F +Y+ER ++
Sbjct: 89 GHNHGRE-GKVVKINRKRFKIYVERVTREK 117
Score = 52.4 bits (120), Expect = 6e-06
Identities = 21/39 (53%), Positives = 31/39 (79%)
Frame = +3
Query: 255 IQREKANGATAYVGIHXSKCVIVKLKMNKDRKAILDRRA 371
+ REKANG + ++GIH S ++ KLK++K+RK ILDR+A
Sbjct: 113 VTREKANGESTFIGIHPSNVILTKLKIDKNRKKILDRKA 151
>UniRef50_A2QXI7 Cluster: Contig An11c0300, complete genome; n=2;
Trichocomaceae|Rep: Contig An11c0300, complete genome -
Aspergillus niger
Length = 134
Score = 106 bits (254), Expect = 3e-22
Identities = 50/86 (58%), Positives = 65/86 (75%)
Frame = +1
Query: 13 NKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYK 192
N + SSRRK+R HF+APS RRV++S+PLS ELR K+NV+SMPIRKDDEV VVRG K
Sbjct: 5 NSSLASSRRKSRAAHFNAPSSERRVILSAPLSSELRAKYNVRSMPIRKDDEVMVVRGSNK 64
Query: 193 GQQVGKVMQVYRKKFVVYIERFKEKR 270
G++ GKV VYR K+ +++ER +
Sbjct: 65 GRE-GKVTSVYRLKWAIHVERISRDK 89
Score = 48.8 bits (111), Expect = 7e-05
Identities = 26/53 (49%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Frame = +3
Query: 243 IH*E-IQREKANGATAYVGIHXSKCVIVKLKMNKDRKAILDRRAKGRLAALGK 398
IH E I R+K+NG + + +H S VI KL ++KDR+AIL+R KGR A K
Sbjct: 80 IHVERISRDKSNGQSVPIPLHPSNVVIKKLHLDKDREAILERVGKGREAVKAK 132
>UniRef50_Q5ZDH6 Cluster: Putative ribosomal protein L26; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative ribosomal
protein L26 - Oryza sativa subsp. japonica (Rice)
Length = 129
Score = 100 bits (240), Expect = 2e-20
Identities = 48/64 (75%), Positives = 55/64 (85%)
Frame = +1
Query: 4 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 183
MK N +VTSSRRK RK HF+APS +RRVLMS+ LS ELR K+NV+S+PIRKDDEVQVVRG
Sbjct: 1 MKRNPRVTSSRRKCRKAHFTAPSSVRRVLMSAALSSELRHKYNVRSIPIRKDDEVQVVRG 60
Query: 184 HYKG 195
YKG
Sbjct: 61 SYKG 64
>UniRef50_P05743 Cluster: 60S ribosomal protein L26-A; n=92;
Eukaryota|Rep: 60S ribosomal protein L26-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 127
Score = 99.1 bits (236), Expect = 5e-20
Identities = 50/88 (56%), Positives = 67/88 (76%), Gaps = 1/88 (1%)
Frame = +1
Query: 7 KFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGH 186
K + V+S RRK RK +F+APS RRVL+S+PLSKELR ++ +K++PIR+DDEV VVRG
Sbjct: 3 KQSLDVSSDRRKARKAYFTAPSSQRRVLLSAPLSKELRAQYGIKALPIRRDDEVLVVRGS 62
Query: 187 YKGQQVGKVMQVYRKKFVVYIERF-KEK 267
KGQ+ GK+ VYR KF V +++ KEK
Sbjct: 63 KKGQE-GKISSVYRLKFAVQVDKVTKEK 89
Score = 46.4 bits (105), Expect = 4e-04
Identities = 20/44 (45%), Positives = 32/44 (72%)
Frame = +3
Query: 252 EIQREKANGATAYVGIHXSKCVIVKLKMNKDRKAILDRRAKGRL 383
++ +EK NGA+ + +H SK VI KL ++KDRKA++ R+ G+L
Sbjct: 84 KVTKEKVNGASVPINLHPSKLVITKLHLDKDRKALIQRKG-GKL 126
>UniRef50_A0BIZ3 Cluster: Chromosome undetermined scaffold_11, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_11,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 144
Score = 95.9 bits (228), Expect = 5e-19
Identities = 45/84 (53%), Positives = 65/84 (77%)
Frame = +1
Query: 4 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 183
MK + +V+S RRK R+ APS++R LMS+ LSK+LR+K+NV+++P+RKDDEV VVRG
Sbjct: 1 MKTHVEVSSQRRKGRRAQLGAPSNLRYKLMSAHLSKDLRKKYNVRALPVRKDDEVTVVRG 60
Query: 184 HYKGQQVGKVMQVYRKKFVVYIER 255
+KG + GKV VYRK++ + IE+
Sbjct: 61 THKGTK-GKVSSVYRKRWTIQIEK 83
Score = 44.0 bits (99), Expect = 0.002
Identities = 19/49 (38%), Positives = 31/49 (63%)
Frame = +3
Query: 252 EIQREKANGATAYVGIHXSKCVIVKLKMNKDRKAILDRRAKGRLAALGK 398
++ R KANG + I S+C+I K +N+DRK +L R+A +++ GK
Sbjct: 83 KLTRTKANGMPYQIPIRASQCIITKPYLNEDRKQLLARKASAKVSTKGK 131
>UniRef50_Q00Y51 Cluster: Putative L24 ribosomal protein; n=1;
Ostreococcus tauri|Rep: Putative L24 ribosomal protein -
Ostreococcus tauri
Length = 154
Score = 94.7 bits (225), Expect = 1e-18
Identities = 46/82 (56%), Positives = 63/82 (76%)
Frame = +1
Query: 4 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 183
MK++ VTSSRRK RK HF+APS RR LMS+ LS EL+ + ++PIR +DEV+V RG
Sbjct: 20 MKYSTAVTSSRRKTRKAHFTAPSSERRKLMSAALSAELKAQHGANAVPIRVNDEVRVTRG 79
Query: 184 HYKGQQVGKVMQVYRKKFVVYI 249
+K ++ GKV+QVYRKK+V++I
Sbjct: 80 SFKNRE-GKVVQVYRKKWVIHI 100
>UniRef50_UPI0000499C5A Cluster: 60S ribosomal protein L26; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L26 - Entamoeba histolytica HM-1:IMSS
Length = 213
Score = 86.2 bits (204), Expect = 4e-16
Identities = 42/89 (47%), Positives = 64/89 (71%)
Frame = +1
Query: 4 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 183
MKFN +V+S+ K RK ++AP+ R +LMS+ LSKELR+K+NV ++PI KDDEV++++G
Sbjct: 1 MKFNCKVSSNPSKARKALYTAPASQRAILMSARLSKELREKYNVIAIPIHKDDEVKIIKG 60
Query: 184 HYKGQQVGKVMQVYRKKFVVYIERFKEKR 270
H K GKV V R K+V+ I++ + +
Sbjct: 61 HQK--VAGKVTAVRRSKYVINIDKLTKTK 87
Score = 41.1 bits (92), Expect = 0.014
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +3
Query: 252 EIQREKANGATAYVGIHXSKCVIVKLKMNKDRKAILDRRAKGR 380
++ + KANG T V I S +I KL +NKDR+A L ++A+ R
Sbjct: 82 KLTKTKANGQTVPVAIRPSNVIITKLFLNKDREAYLAKKAESR 124
>UniRef50_A7QPA2 Cluster: Chromosome chr1 scaffold_136, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr1 scaffold_136, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 119
Score = 81.4 bits (192), Expect = 1e-14
Identities = 41/69 (59%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Frame = +1
Query: 85 VLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERFK- 261
+LMS+PLS LR K+NV+SMPIRKDDEVQVVRG +KG++ GKV+QVY +K V++++R
Sbjct: 46 LLMSAPLSTNLRSKYNVRSMPIRKDDEVQVVRGTFKGRE-GKVVQVYCQKRVIHVKRISH 104
Query: 262 EKRPMVQQH 288
EK P+ H
Sbjct: 105 EKIPIGFPH 113
>UniRef50_Q7R3B5 Cluster: GLP_111_22147_22554; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_111_22147_22554 - Giardia lamblia
ATCC 50803
Length = 135
Score = 79.8 bits (188), Expect = 3e-14
Identities = 40/88 (45%), Positives = 59/88 (67%)
Frame = +1
Query: 4 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 183
MK N VT+SRRK RK +F+A + R +MSS LSKELR + +K+MPIR+ D V++ G
Sbjct: 1 MKLNSAVTASRRKCRKAYFTANAETRAKMMSSRLSKELRAEHKIKTMPIRRGDIVEIFTG 60
Query: 184 HYKGQQVGKVMQVYRKKFVVYIERFKEK 267
+KG GKV++V R+ + + +E +K
Sbjct: 61 GHKG--TGKVVEVRRRDYKICVEGINQK 86
>UniRef50_P54038 Cluster: 50S ribosomal protein L24P; n=14;
Archaea|Rep: 50S ribosomal protein L24P - Methanococcus
jannaschii
Length = 120
Score = 76.2 bits (179), Expect = 4e-13
Identities = 38/89 (42%), Positives = 60/89 (67%)
Frame = +1
Query: 4 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 183
M F K + RK RK F+AP H+RR +MS+ LSKEL++K ++P+RK D V+++RG
Sbjct: 1 MAFTK--SKQPRKQRKALFNAPLHLRRKVMSAMLSKELKEKLGKNAIPVRKGDVVRIMRG 58
Query: 184 HYKGQQVGKVMQVYRKKFVVYIERFKEKR 270
+KG + G+V++V K++ +Y+E KR
Sbjct: 59 DFKGLE-GEVIKVDLKRYRIYVEGANNKR 86
>UniRef50_Q8TW19 Cluster: 50S ribosomal protein L24P; n=17;
Archaea|Rep: 50S ribosomal protein L24P - Methanopyrus
kandleri
Length = 149
Score = 75.4 bits (177), Expect = 7e-13
Identities = 35/76 (46%), Positives = 55/76 (72%)
Frame = +1
Query: 25 TSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQV 204
+S RK RK F+AP H R+ LMS+ L ELR+KFN +S+P+R+ D V+++RG +KG +
Sbjct: 6 SSQPRKQRKAFFNAPLHKRQKLMSATLHPELRKKFNRRSLPVRRGDMVRIMRGDFKGHE- 64
Query: 205 GKVMQVYRKKFVVYIE 252
G+V++V K+ +Y+E
Sbjct: 65 GEVVEVDLKRLRIYVE 80
>UniRef50_UPI0000DD790D Cluster: PREDICTED: similar to 60S ribosomal
protein L26 (Silica-induced gene 20 protein) (SIG-20);
n=2; Homo/Pan/Gorilla group|Rep: PREDICTED: similar to
60S ribosomal protein L26 (Silica-induced gene 20
protein) (SIG-20) - Homo sapiens
Length = 127
Score = 72.9 bits (171), Expect = 4e-12
Identities = 34/54 (62%), Positives = 44/54 (81%), Gaps = 2/54 (3%)
Frame = +1
Query: 115 LRQKFNVKSMPIRKDDEVQVVR--GHYKGQQVGKVMQVYRKKFVVYIERFKEKR 270
L NV+SMP RKD+EVQVVR GHYKGQQ+G V+QVYRKK+V+YIE ++++
Sbjct: 18 LNAHINVQSMPNRKDNEVQVVRVRGHYKGQQIGTVVQVYRKKYVIYIEWVQQEK 71
Score = 66.1 bits (154), Expect = 4e-10
Identities = 31/53 (58%), Positives = 41/53 (77%)
Frame = +3
Query: 255 IQREKANGATAYVGIHXSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 413
+Q+EKANG T +VGIH SK VI +LK++KDRK I +++AK A GK+KGKY
Sbjct: 67 VQQEKANGTTVHVGIHPSKAVITRLKLDKDRKKIPEQKAKSHQA--GKEKGKY 117
>UniRef50_Q0IUK5 Cluster: Os11g0151300 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os11g0151300 protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 68.9 bits (161), Expect = 6e-11
Identities = 37/58 (63%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Frame = +3
Query: 243 IH*E-IQREKANGATAYVGIHXSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 413
IH E I REK NG+T VGIH SK V+ KLK++KDRKAILDR+A GR A K KGK+
Sbjct: 89 IHVERITREKVNGSTVNVGIHPSKVVVTKLKLDKDRKAILDRKASGR--AADKAKGKF 144
Score = 62.1 bits (144), Expect = 7e-09
Identities = 30/66 (45%), Positives = 49/66 (74%)
Frame = +1
Query: 73 HIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIE 252
H+RR L +P ++++ + P+RKDDEVQVVRG YKG++ GKV+QVYR+++V+++E
Sbjct: 40 HVRRALHRAP--PQVQRPLH----PVRKDDEVQVVRGSYKGRE-GKVVQVYRRRWVIHVE 92
Query: 253 RFKEKR 270
R ++
Sbjct: 93 RITREK 98
>UniRef50_P60663 Cluster: 50S ribosomal protein L24P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L24P -
Nanoarchaeum equitans
Length = 140
Score = 67.7 bits (158), Expect = 1e-10
Identities = 32/71 (45%), Positives = 51/71 (71%)
Frame = +1
Query: 37 RKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVM 216
RK RK +AP H RR +M SPLSKELR+K ++++PI+ D V+V RG+++G++ G+V+
Sbjct: 23 RKQRKYIINAPLHRRRKMMRSPLSKELREKLGIRNVPIKVGDVVRVERGNFRGKE-GQVI 81
Query: 217 QVYRKKFVVYI 249
+ K + VY+
Sbjct: 82 DIDPKYYRVYL 92
>UniRef50_A3H985 Cluster: Ribosomal protein L24; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L24 -
Caldivirga maquilingensis IC-167
Length = 143
Score = 65.3 bits (152), Expect = 7e-10
Identities = 31/83 (37%), Positives = 53/83 (63%)
Frame = +1
Query: 25 TSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQV 204
+S RK K AP H RR L+++PLSK+L+++ ++ +P+R D V ++RG +KG +
Sbjct: 7 SSQPRKQHKALTKAPWHARRRLLTAPLSKDLQRQLGIRRIPVRVGDTVLILRGDFKGTR- 65
Query: 205 GKVMQVYRKKFVVYIERFKEKRP 273
GKV +V K+ +Y++ K+P
Sbjct: 66 GKVTRVDYKRVRIYVDSASFKKP 88
>UniRef50_Q8SRE6 Cluster: 60S RIBOSOMAL PROTEIN L26; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L26
- Encephalitozoon cuniculi
Length = 143
Score = 62.9 bits (146), Expect = 4e-09
Identities = 31/79 (39%), Positives = 50/79 (63%)
Frame = +1
Query: 16 KQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKG 195
KQ TSSRRK RK HF+ +R+ S+ LS+ELR+++ ++ P+R D V V G + G
Sbjct: 6 KQKTSSRRKQRKAHFACNDGEKRIRSSARLSRELRKEYGFRTFPLRTGDTVVVKGGKFDG 65
Query: 196 QQVGKVMQVYRKKFVVYIE 252
++ G + ++ + + VYIE
Sbjct: 66 KE-GVISKINYRDYKVYIE 83
>UniRef50_A1RWS4 Cluster: Ribosomal protein L24; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L24 - Thermofilum
pendens (strain Hrk 5)
Length = 131
Score = 62.5 bits (145), Expect = 5e-09
Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Frame = +1
Query: 16 KQVTSSRRKNRKRH-FSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYK 192
K +S K RKR + AP HIR + +PLS EL+QK +K + +RK D V +VRG +K
Sbjct: 3 KGTSSKPGKVRKREVYDAPLHIRSKKIVAPLSAELQQKLGIKRIRVRKGDRVLIVRGSFK 62
Query: 193 GQQVGKVMQVYRKKFVVYIE 252
G + GKV V KK +++E
Sbjct: 63 GHE-GKVTSVDVKKGRIHVE 81
>UniRef50_O05633 Cluster: 50S ribosomal protein L24P; n=1;
Sulfolobus acidocaldarius|Rep: 50S ribosomal protein
L24P - Sulfolobus acidocaldarius
Length = 134
Score = 60.5 bits (140), Expect = 2e-08
Identities = 30/83 (36%), Positives = 55/83 (66%)
Frame = +1
Query: 22 VTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQ 201
++S K RK ++ P+H+R L+++ LS++L +++ +K + IRK D V+++RG G +
Sbjct: 2 ISSKPSKQRKLVYNLPNHLRYKLLTARLSEDLEKQYGIKRISIRKGDSVKLMRGSQVGYE 61
Query: 202 VGKVMQVYRKKFVVYIERFKEKR 270
GKV++V RK+ V IE +K+
Sbjct: 62 -GKVVEVDRKRGRVAIEGLTKKK 83
>UniRef50_Q98RW9 Cluster: 60S ribosomal protein L26; n=1; Guillardia
theta|Rep: 60S ribosomal protein L26 - Guillardia theta
(Cryptomonas phi)
Length = 108
Score = 58.4 bits (135), Expect = 9e-08
Identities = 31/89 (34%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Frame = +1
Query: 4 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 183
MK+ VT SRRKNRKR F ++ + LSKE+++ K++ ++K+ E++V RG
Sbjct: 1 MKYKHHVTCSRRKNRKRCFLNLKRKNSNIIKTNLSKEMQKYHKKKTLILKKNYEIKVKRG 60
Query: 184 HYKGQQVGKVMQVYRKKFVVYIER-FKEK 267
+KG + GKV+Q+ ++ ++++ F+ K
Sbjct: 61 DFKG-KTGKVIQIKPEQQKIFVDNIFRNK 88
>UniRef50_A2DCS2 Cluster: Ribosomal protein L24, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L24,
putative - Trichomonas vaginalis G3
Length = 138
Score = 56.4 bits (130), Expect = 3e-07
Identities = 27/51 (52%), Positives = 35/51 (68%), Gaps = 3/51 (5%)
Frame = +3
Query: 261 REKANGATAYVGIHXSKCVIVKLKMNKDRKAILDRRAKGR---LAALGKDK 404
REK NG T +V +H S C+I KLKM+K RK +++RR GR LA LG +K
Sbjct: 87 REKLNGQTVHVSVHPSNCLITKLKMDKQRKELIERRRAGREKILAKLGHNK 137
Score = 54.4 bits (125), Expect = 1e-06
Identities = 28/89 (31%), Positives = 51/89 (57%)
Frame = +1
Query: 4 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 183
+K N ++S +K RK F+A + +S+ L+KE + VK +PIR+DDEV + G
Sbjct: 2 VKTNPFLSSQAKKTRKAFFNATKDDKHRQLSAKLNKEQAETHGVKQLPIRRDDEVSINSG 61
Query: 184 HYKGQQVGKVMQVYRKKFVVYIERFKEKR 270
+ G++ GKV+ V + + ++ F ++
Sbjct: 62 KFAGRE-GKVIAVKLSENRIVVDSFTREK 89
>UniRef50_Q8PV39 Cluster: 50S ribosomal protein L24P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L24P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 122
Score = 52.8 bits (121), Expect = 4e-06
Identities = 25/69 (36%), Positives = 42/69 (60%)
Frame = +1
Query: 16 KQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKG 195
+ V+ RK RK ++AP HIR+ M + LS+ L +++ +S + D V+++RG +KG
Sbjct: 6 EMVSKQPRKQRKARYTAPLHIRQKFMGARLSEALAKQYGTRSAAVITGDTVKIMRGDFKG 65
Query: 196 QQVGKVMQV 222
+ GKV V
Sbjct: 66 TE-GKVQSV 73
>UniRef50_A0RVY4 Cluster: Ribosomal protein L24; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L24 - Cenarchaeum
symbiosum
Length = 167
Score = 50.0 bits (114), Expect = 3e-05
Identities = 30/81 (37%), Positives = 48/81 (59%)
Frame = +1
Query: 28 SSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVG 207
+++ +NR+ + A + R + + SPLSKELR K+ +S+ + + D V VVRG YK G
Sbjct: 3 ATKMRNRQI-YQASTRTRSMQVGSPLSKELRAKYGKRSVRVVEGDTVSVVRGEYKDID-G 60
Query: 208 KVMQVYRKKFVVYIERFKEKR 270
KV V + V IE K+++
Sbjct: 61 KVSHVDTESGSVAIEGIKKEK 81
>UniRef50_P10972 Cluster: 50S ribosomal protein L24P; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L24P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 120
Score = 47.2 bits (107), Expect = 2e-04
Identities = 23/71 (32%), Positives = 43/71 (60%)
Frame = +1
Query: 40 KNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQ 219
K RK AP H R + + LS +LR+++ +++ + D V+V+RG + G++ G+V+
Sbjct: 7 KQRKSQRRAPLHERHKQVRATLSADLREEYGQRNVRVNAGDTVEVLRGDFAGEE-GEVIN 65
Query: 220 VYRKKFVVYIE 252
V K V+++E
Sbjct: 66 VDLDKAVIHVE 76
>UniRef50_A7DSY3 Cluster: KOW domain protein; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: KOW domain protein -
Candidatus Nitrosopumilus maritimus SCM1
Length = 168
Score = 44.4 bits (100), Expect = 0.001
Identities = 24/78 (30%), Positives = 43/78 (55%)
Frame = +1
Query: 37 RKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVM 216
+ K + A + + S LSK+L++K+ +S+ + + D V ++RG +KG GKV
Sbjct: 5 KMRNKMIYRASYQTKSKQLGSALSKDLQKKYGKRSVRVNEGDSVTILRGEFKGVD-GKVA 63
Query: 217 QVYRKKFVVYIERFKEKR 270
+V K V IE K+++
Sbjct: 64 EVSTAKSSVAIEGVKKEK 81
>UniRef50_A4YCX7 Cluster: KOW domain protein; n=1; Metallosphaera
sedula DSM 5348|Rep: KOW domain protein - Metallosphaera
sedula DSM 5348
Length = 111
Score = 44.4 bits (100), Expect = 0.001
Identities = 24/58 (41%), Positives = 37/58 (63%)
Frame = +1
Query: 97 SPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERFKEKR 270
+PLS EL +++ +K + IRKDD V+V+RG G + GKV QV+ + + IE K+
Sbjct: 8 APLSDELAKEYGMKRIGIRKDDTVRVMRGDNYGFE-GKVTQVFPESGRIAIEGLTRKK 64
>UniRef50_Q97BW5 Cluster: 50S ribosomal protein L24P; n=2;
Thermoplasma|Rep: 50S ribosomal protein L24P -
Thermoplasma volcanium
Length = 145
Score = 43.2 bits (97), Expect = 0.003
Identities = 23/50 (46%), Positives = 33/50 (66%)
Frame = +1
Query: 103 LSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIE 252
LSK+LR+K+ ++S PI K D V+VV G KG+ GKV +V +V +E
Sbjct: 9 LSKDLRKKYGIRSFPIVKGDVVKVVSGARKGEG-GKVAEVDHHSGLVIVE 57
>UniRef50_Q6L1B6 Cluster: Large subunit ribosomal protein L24P; n=2;
Thermoplasmatales|Rep: Large subunit ribosomal protein
L24P - Picrophilus torridus
Length = 154
Score = 42.7 bits (96), Expect = 0.005
Identities = 21/50 (42%), Positives = 32/50 (64%)
Frame = +1
Query: 103 LSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIE 252
LSK+LR+K+ ++ P+ K D V+++ G KG+ GKV+ V K V IE
Sbjct: 10 LSKDLRKKYGIRRFPVAKGDIVKIISGSRKGEG-GKVVDVDHKTMKVSIE 58
>UniRef50_UPI00005A08CE Cluster: PREDICTED: similar to 60S ribosomal
protein L26-like 1; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 60S ribosomal protein L26-like 1 -
Canis familiaris
Length = 165
Score = 42.3 bits (95), Expect = 0.006
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = +1
Query: 4 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSP 102
M FN +T NRKRH +APSH+RR +MSSP
Sbjct: 97 MNFNPFLTWGCSTNRKRHVNAPSHVRRNIMSSP 129
>UniRef50_Q30Z53 Cluster: 50S ribosomal protein L24; n=9;
Bacteria|Rep: 50S ribosomal protein L24 - Desulfovibrio
desulfuricans (strain G20)
Length = 107
Score = 40.7 bits (91), Expect = 0.018
Identities = 23/55 (41%), Positives = 35/55 (63%)
Frame = +1
Query: 133 VKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERFKEKRPMVQQHMSA 297
+K IRKDD+V V+ G KG ++GKV++V RKK V +E+ + ++HM A
Sbjct: 1 MKQFRIRKDDKVMVISGKDKG-KIGKVLKVLRKKDRVLVEKVN----VAKRHMRA 50
>UniRef50_Q0IQ32 Cluster: Os12g0150000 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os12g0150000 protein -
Oryza sativa subsp. japonica (Rice)
Length = 283
Score = 37.9 bits (84), Expect = 0.13
Identities = 24/85 (28%), Positives = 41/85 (48%)
Frame = -2
Query: 258 ESLNVYNKLFTIHLHHFANLLAFVVSTYNLNFIVFANRHGFYIEFLS*FLRQGRGHQHSP 79
++L+V + + LHH L A V ++L+ +V A+ G + ++ +G GH+ +
Sbjct: 113 DALDVDHPPAAVDLHHLP-LAALVAPPHHLHLVVLADGDGADVVLVAELGGEGGGHEDAA 171
Query: 78 YM*RSTEMPLPVFPS*GSHLLVELH 4
R E+ LP P H V LH
Sbjct: 172 DGGRRREVRLPALPPGARHAWVALH 196
>UniRef50_Q2JIL6 Cluster: 50S ribosomal protein L24; n=25;
Bacteria|Rep: 50S ribosomal protein L24 - Synechococcus
sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria
bacteriumYellowstone B-Prime)
Length = 132
Score = 37.1 bits (82), Expect = 0.22
Identities = 23/62 (37%), Positives = 39/62 (62%)
Frame = +1
Query: 67 PSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVY 246
PS IRR L+ P ++ R K M I++ D VQV+ G KG ++G+V++V+ ++ +V
Sbjct: 7 PSQIRR-LVRRPGIRKHRNSLRYK-MRIKQGDTVQVISGDDKG-KIGEVLRVFPERNMVL 63
Query: 247 IE 252
+E
Sbjct: 64 VE 65
>UniRef50_Q673R7 Cluster: Ribosomal protein L24; n=2; environmental
samples|Rep: Ribosomal protein L24 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 145
Score = 36.7 bits (81), Expect = 0.30
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +1
Query: 22 VTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHY 189
V+ K R+ AP H+RR M S L + +++S+ IR D V+V+RG +
Sbjct: 2 VSKKAGKQRQAQTDAPVHVRRKRMRSRLISDEPDLQSIRSVTIRVGDTVEVLRGDF 57
>UniRef50_Q4S8H7 Cluster: Chromosome 2 SCAF14705, whole genome shotgun
sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome 2
SCAF14705, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 2759
Score = 36.3 bits (80), Expect = 0.39
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = -2
Query: 456 YLFKRPPWLWQFPRCIYPCLCQVQPVCPLLCDRGLLCG 343
YL P W W FP P L ++Q +CP DR L CG
Sbjct: 2559 YLMNNPSWSWVFP----PDLLRLQRMCPEKMDRFLCCG 2592
>UniRef50_Q64E17 Cluster: Ribosomal protein L21E; n=3; environmental
samples|Rep: Ribosomal protein L21E - uncultured
archaeon GZfos17A3
Length = 130
Score = 36.3 bits (80), Expect = 0.39
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Frame = +1
Query: 13 NKQVTSSR--RKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGH 186
NKQ+ S RK ++ S P R + SP+SK ++Q +S+ IR D V H
Sbjct: 18 NKQMARSHGERKRTRKKLSKPKRARGL---SPISKAIQQFEPGESVHIRIDPSVHKGMPH 74
Query: 187 YKGQ-QVGKVMQVYRKKFVVYIERFKEKRPMVQQ 285
+ GKV+ + F+V I K KR V++
Sbjct: 75 QRFHGMTGKVIGERGRAFIVEISDGKRKRKKVKE 108
>UniRef50_Q56435 Cluster: 50S ribosomal protein L24; n=18;
Bacteria|Rep: 50S ribosomal protein L24 - Thermus
thermophilus
Length = 110
Score = 36.3 bits (80), Expect = 0.39
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = +1
Query: 142 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIE 252
M ++K D V V G YKG +VGKV +V KK+ V +E
Sbjct: 5 MHVKKGDTVLVASGKYKG-RVGKVKEVLPKKYAVIVE 40
>UniRef50_Q5C6X2 Cluster: Putative uncharacterized protein; n=1;
Schistosoma japonicum|Rep: Putative uncharacterized
protein - Schistosoma japonicum (Blood fluke)
Length = 96
Score = 32.7 bits (71), Expect = 4.8
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -2
Query: 249 NVYNKLFTIHLHHFANLLAFVVSTYNLNFIVF 154
NVY +F +HLH F NLL + Y L+ +VF
Sbjct: 7 NVYILMFFVHLHLFVNLLNSMRGLYFLSVLVF 38
>UniRef50_Q9XD25 Cluster: 50S ribosomal protein L24; n=11;
Bacteria|Rep: 50S ribosomal protein L24 - Leptospira
interrogans
Length = 119
Score = 32.7 bits (71), Expect = 4.8
Identities = 15/45 (33%), Positives = 29/45 (64%)
Frame = +1
Query: 136 KSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERFKEKR 270
K I+K+DEV + G +KG++ GKV+ + +K+ V +E +++
Sbjct: 15 KKFRIKKNDEVICITGKHKGKR-GKVLSIDKKRDRVIVEGLNKRK 58
>UniRef50_Q7RN67 Cluster: DHHC zinc finger domain, putative; n=5;
Plasmodium|Rep: DHHC zinc finger domain, putative -
Plasmodium yoelii yoelii
Length = 284
Score = 32.3 bits (70), Expect = 6.4
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -2
Query: 315 HTLXCE-CRHMLLHHWPFLFESLNVYNKLFTIHLHHFANLLAFVVSTYNLNFIVFANRHG 139
H C C + HH P++ + YN+ F I L + + F+V+T ++I N +
Sbjct: 113 HCSACNRCVLNMDHHCPWINNCVGFYNRRFFIQLLFYGLICLFMVATQTFHYIFIDNINA 172
Query: 138 F 136
+
Sbjct: 173 Y 173
>UniRef50_O77355 Cluster: Putative uncharacterized protein
MAL3P4.20; n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein MAL3P4.20 - Plasmodium
falciparum (isolate 3D7)
Length = 600
Score = 32.3 bits (70), Expect = 6.4
Identities = 20/65 (30%), Positives = 32/65 (49%)
Frame = +1
Query: 73 HIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIE 252
H R L SS +S + R+K K + R DD + H + K + +RK+ + +E
Sbjct: 273 HNGRSLSSSDISYQHRRKVKKKKINKRHDDSSSEISSHTYASRYDKERKRFRKR-DINLE 331
Query: 253 RFKEK 267
R KE+
Sbjct: 332 RHKER 336
>UniRef50_Q9ZCR6 Cluster: 50S ribosomal protein L24; n=60;
Bacteria|Rep: 50S ribosomal protein L24 - Rickettsia
prowazekii
Length = 113
Score = 32.3 bits (70), Expect = 6.4
Identities = 13/36 (36%), Positives = 26/36 (72%)
Frame = +1
Query: 142 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYI 249
+ ++K DEV ++ G YKG++ GKV++V+ ++ V +
Sbjct: 4 LKVKKGDEVVIITGKYKGKK-GKVLKVFPEENTVVV 38
>UniRef50_O67569 Cluster: 50S ribosomal protein L24; n=10;
Bacteria|Rep: 50S ribosomal protein L24 - Aquifex
aeolicus
Length = 132
Score = 32.3 bits (70), Expect = 6.4
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +1
Query: 148 IRKDDEVQVVRGHYKGQQVGKVMQVYRK 231
I+K D V VVRG KG+Q GKV++VY +
Sbjct: 6 IKKGDTVLVVRGKEKGKQ-GKVLKVYER 32
>UniRef50_O46905 Cluster: Chloroplast 50S ribosomal protein L24;
n=6; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L24 - Guillardia theta (Cryptomonas phi)
Length = 101
Score = 32.3 bits (70), Expect = 6.4
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = +1
Query: 142 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERFKEKRPMVQ 282
M I++ D+VQV+ G YKG ++ +V++V RK + ++ K V+
Sbjct: 1 MTIKQGDKVQVIAGSYKG-EITEVLKVIRKSNSLILKNINIKNKHVK 46
>UniRef50_Q90X38 Cluster: G patch domain and KOW motifs-containing
protein; n=10; Euteleostomi|Rep: G patch domain and KOW
motifs-containing protein - Danio rerio (Zebrafish)
(Brachydanio rerio)
Length = 506
Score = 32.3 bits (70), Expect = 6.4
Identities = 17/54 (31%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Frame = +1
Query: 112 ELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKK--FVVYIERFKEK 267
++RQK +P D + VV G ++G QVG++++ R+K +V ++R++E+
Sbjct: 436 DIRQKMLETIVPKNDSDYIMVVLGEHRG-QVGRILKRDREKCRAMVQLDRYEER 488
>UniRef50_Q8YLR0 Cluster: Alr5236 protein; n=1; Nostoc sp. PCC
7120|Rep: Alr5236 protein - Anabaena sp. (strain PCC
7120)
Length = 454
Score = 31.9 bits (69), Expect = 8.5
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -2
Query: 264 LFESLNVYNKLFTIHLHHFANLLAFVVSTYNL-NFIVFANRHGFYIEFLS*FL 109
+F L V+ KL T L + A L AF++ NL N +VF N G Y F S F+
Sbjct: 380 IFSLLGVFLKLKTPFLRNLA-LAAFLLHAINLTNQLVFNNTLGIYYWFFSGFI 431
>UniRef50_A4CYH5 Cluster: Putative uncharacterized protein; n=1;
Synechococcus sp. WH 7805|Rep: Putative uncharacterized
protein - Synechococcus sp. (strain WH7805)
Length = 260
Score = 31.9 bits (69), Expect = 8.5
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -3
Query: 443 GLHGCGSFLGVFTLVFAKCSQSALCSAIEDCFAVFIHLQLDNHTL 309
GL GCG F FT + K + A S +D F+ F+ L ++ +
Sbjct: 68 GLDGCGKFFRSFTKLHPKSASLAYGSKSKDSFSYFLDFTLSHNLI 112
>UniRef50_Q1KVT3 Cluster: DNA-directed RNA polymerase; n=1;
Scenedesmus obliquus|Rep: DNA-directed RNA polymerase -
Scenedesmus obliquus
Length = 1529
Score = 31.9 bits (69), Expect = 8.5
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -2
Query: 249 NVYNKLFTIHLHHFANLLAFVVSTYNLNFIVFANRHGFYIE 127
N++N F + L+ F +LAF+ Y ++F F +H F E
Sbjct: 614 NLFNLFFDVSLN-FGKILAFLKLYYEIDFCSFVQKHSFDFE 653
>UniRef50_Q4YND5 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 113
Score = 31.9 bits (69), Expect = 8.5
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = -2
Query: 273 WPFLFESLNVYNKLFTIHLHHFANLLAFVVSTYNLNFIVFANRHGFYIEF 124
W F F N + + IH+ HF N F Y NF F N F+ F
Sbjct: 30 WFFFFNLFNFFTFFYFIHVVHFFNFFTFF---YLFNFFHFFNFFTFFYLF 76
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 452,277,464
Number of Sequences: 1657284
Number of extensions: 8904623
Number of successful extensions: 24387
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 23559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24364
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30110042232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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