Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0894
(505 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0263 + 2136858-2137331 124 5e-29
12_01_0323 - 2459854-2460306 123 7e-29
11_01_0317 - 2365493-2365786,2365825-2365953 86 1e-17
08_01_0391 + 3443989-3444219 29 1.6
12_01_0495 - 3935395-3937110 29 2.1
04_04_0705 - 27406405-27406424,27406425-27409260 29 2.1
09_02_0512 + 10101274-10102248,10102363-10102748,10103807-10104503 29 2.8
06_03_1161 - 28089177-28089359,28089473-28089700,28089776-280898... 29 2.8
12_02_0996 - 25115643-25115708,25115869-25116107,25116484-251165... 28 3.7
06_03_0721 - 23861426-23861929,23862013-23862219,23862598-238628... 28 4.9
04_03_0232 - 13049649-13052807 27 6.5
01_06_0932 - 33147656-33148098,33148631-33148675,33148815-331489... 27 6.5
12_01_0411 + 3276679-3276687,3277430-3277493,3278256-3278297,327... 27 8.6
11_06_0621 + 25587476-25587604,25588230-25588423,25588800-255888... 27 8.6
10_08_0405 - 17657678-17658110,17658219-17659663,17659708-17660076 27 8.6
03_05_0697 + 26888791-26888861,26890468-26890579,26891561-268917... 27 8.6
02_05_0114 + 25958834-25961296 27 8.6
>01_01_0263 + 2136858-2137331
Length = 157
Score = 124 bits (298), Expect = 5e-29
Identities = 58/89 (65%), Positives = 76/89 (85%)
Frame = +1
Query: 4 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 183
MK N +VTSSRRK RK HF+APS +RRVLMS+ LS ELR K+NV+S+PIRKDDEVQVVRG
Sbjct: 1 MKRNPRVTSSRRKCRKAHFTAPSSVRRVLMSAALSSELRHKYNVRSIPIRKDDEVQVVRG 60
Query: 184 HYKGQQVGKVMQVYRKKFVVYIERFKEKR 270
YKG++ GKV+QVYR+++V+++ER ++
Sbjct: 61 SYKGRE-GKVVQVYRRRWVIHVERITREK 88
Score = 69.7 bits (163), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Frame = +3
Query: 243 IH*E-IQREKANGATAYVGIHXSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 413
IH E I REK NG+T VGIH SK V+ KLK++KDRKAILDR+A+GR A K KGK+
Sbjct: 79 IHVERITREKVNGSTVNVGIHPSKVVVTKLKLDKDRKAILDRKARGR--AADKAKGKF 134
>12_01_0323 - 2459854-2460306
Length = 150
Score = 123 bits (297), Expect = 7e-29
Identities = 58/89 (65%), Positives = 76/89 (85%)
Frame = +1
Query: 4 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 183
MK N +VTSSRRK RK HF+APS +RRVLMS+ LS ELR K+NV+S+PIRKDDEVQVVRG
Sbjct: 1 MKRNPRVTSSRRKCRKAHFTAPSSVRRVLMSAALSTELRHKYNVRSIPIRKDDEVQVVRG 60
Query: 184 HYKGQQVGKVMQVYRKKFVVYIERFKEKR 270
YKG++ GKV+QVYR+++V+++ER ++
Sbjct: 61 SYKGRE-GKVVQVYRRRWVIHVERITREK 88
Score = 68.9 bits (161), Expect = 2e-12
Identities = 37/58 (63%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Frame = +3
Query: 243 IH*E-IQREKANGATAYVGIHXSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 413
IH E I REK NG+T VGIH SK V+ KLK++KDRKAILDR+A GR A K KGK+
Sbjct: 79 IHVERITREKVNGSTVNVGIHPSKVVVTKLKLDKDRKAILDRKASGR--AADKAKGKF 134
>11_01_0317 - 2365493-2365786,2365825-2365953
Length = 140
Score = 86.2 bits (204), Expect = 1e-17
Identities = 47/89 (52%), Positives = 63/89 (70%)
Frame = +1
Query: 4 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 183
MK N +VTSSRRK RK HF+APS +RRVLMS+ LS ELR K+N VVRG
Sbjct: 1 MKRNPRVTSSRRKCRKAHFTAPSSVRRVLMSAALSTELRHKYN-------------VVRG 47
Query: 184 HYKGQQVGKVMQVYRKKFVVYIERFKEKR 270
YKG++ GKV+QVYR+++V+++ER ++
Sbjct: 48 SYKGRE-GKVVQVYRRRWVIHVERITREK 75
Score = 68.9 bits (161), Expect = 2e-12
Identities = 37/58 (63%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Frame = +3
Query: 243 IH*E-IQREKANGATAYVGIHXSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 413
IH E I REK NG+T VGIH SK V+ KLK++KDRKAILDR+A GR A K KGK+
Sbjct: 66 IHVERITREKVNGSTVNVGIHPSKVVVTKLKLDKDRKAILDRKASGR--AADKAKGKF 121
>08_01_0391 + 3443989-3444219
Length = 76
Score = 29.5 bits (63), Expect = 1.6
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = -3
Query: 302 VNADICCCTIGLFSLNLSMYTTNFLRYTCITLPTCWPL 189
++AD+CCC+ L + ++ + L + C+ L TC+ L
Sbjct: 41 MDADLCCCSCALIGIAATV-AASLLAFKCL-LTTCYKL 76
>12_01_0495 - 3935395-3937110
Length = 571
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +2
Query: 248 LRDSKRKGQWCNSICRHSXFKVCDCQVEDE*RPQSNPRSQSKGQTGCTWQ 397
LR R G WCN C + F +C + + R N R++ G W+
Sbjct: 78 LRRRHRPGYWCN--CVYKWFFLCHRKRQSSRRTTGNKRAERVVAAGGRWK 125
>04_04_0705 - 27406405-27406424,27406425-27409260
Length = 951
Score = 29.1 bits (62), Expect = 2.1
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +3
Query: 231 KVCCIH*EIQREKANGATAYVGIHXSKCVIVKLKMNKDRKAILDRRAKGRLAA 389
K CCIH I+ + +T SKC + K R + DR RL+A
Sbjct: 491 KRCCIHDLIREMIVHRSTKERFFVFSKCTVTLKSSKKARHLVFDRCRSDRLSA 543
>09_02_0512 + 10101274-10102248,10102363-10102748,10103807-10104503
Length = 685
Score = 28.7 bits (61), Expect = 2.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 264 LFESLNVYNKLFTIHLHHFANL 199
LF L++YN L IH+HH +L
Sbjct: 7 LFTQLHLYNLLLLIHVHHATSL 28
>06_03_1161 -
28089177-28089359,28089473-28089700,28089776-28089814,
28090681-28090737,28090924-28091046
Length = 209
Score = 28.7 bits (61), Expect = 2.8
Identities = 21/88 (23%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Frame = +1
Query: 7 KFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPI------RKDDEV 168
+F + ++S++ ++F I+ + L + R+K S+P+ R D V
Sbjct: 42 EFRLRTSTSQQPTLCQNFVVKFMIKTCPIQMRLKRWERKKCKPNSLPVLHKMHVRIGDTV 101
Query: 169 QVVRGHYKGQQVGKVMQVYRKKFVVYIE 252
QV+ G KG +VG+V ++++ V ++
Sbjct: 102 QVIAGREKG-KVGEVTRLFKHNSTVIVK 128
>12_02_0996 -
25115643-25115708,25115869-25116107,25116484-25116577,
25116726-25116864,25116960-25117081,25117261-25117491,
25117583-25117644,25118335-25118461,25118890-25119183,
25119266-25119622
Length = 576
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/49 (26%), Positives = 21/49 (42%)
Frame = +2
Query: 290 CRHSXFKVCDCQVEDE*RPQSNPRSQSKGQTGCTWQRQG*IHRGNCHSH 436
C H+ K C C + E + Q+ R + Q ++ I R HS+
Sbjct: 479 CNHNYMKQCKCSIAQEPQLQARARQNAASQQSQLHEKGRQIDRSAVHSN 527
>06_03_0721 - 23861426-23861929,23862013-23862219,23862598-23862852,
23862858-23863212,23863533-23863834,23864006-23864281,
23864854-23865167,23865411-23865683,23865831-23866415,
23866806-23867132,23867270-23867337,23868670-23868746
Length = 1180
Score = 27.9 bits (59), Expect = 4.9
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +1
Query: 178 RGHYKGQQVGKVMQVYRKKFVVYIERFKEKRPMVQQHMSAFTXQ 309
+GH KGQ + F+ IE E P++Q+H+ T +
Sbjct: 874 KGHRKGQLANEGYNDTNGNFLGLIEMLAEFDPVIQEHVRRITSE 917
>04_03_0232 - 13049649-13052807
Length = 1052
Score = 27.5 bits (58), Expect = 6.5
Identities = 19/60 (31%), Positives = 24/60 (40%)
Frame = -2
Query: 378 CPLLCDRGLLCGLYSSST*QSHTLXCECRHMLLHHWPFLFESLNVYNKLFTIHLHHFANL 199
CP L LC S+ TL C L +P +S V+ +L IHLH L
Sbjct: 910 CPRLVHVLPLCSSNSNGCRSLKTLEIVCCGALKDVFPLDSDSTIVFRRLKRIHLHELPKL 969
>01_06_0932 -
33147656-33148098,33148631-33148675,33148815-33148945,
33149192-33149817
Length = 414
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 288 MLLHHWPFLFESLNVYNKLFT 226
M L WPFLFE +N N +F+
Sbjct: 88 MWLSLWPFLFEKINKTNVVFS 108
>12_01_0411 +
3276679-3276687,3277430-3277493,3278256-3278297,
3279047-3279063,3280011-3281258
Length = 459
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = -2
Query: 411 IYPCLCQVQPVCPLLCDRGLLCGLYSSST*QSHTLXC 301
++PC C V+P C L CG + S Q C
Sbjct: 322 LFPCPCNVKPSCLTGLGDELYCGYFFSQPLQLEIWGC 358
>11_06_0621 +
25587476-25587604,25588230-25588423,25588800-25588874,
25589434-25591852
Length = 938
Score = 27.1 bits (57), Expect = 8.6
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = -1
Query: 256 ISQCIQQTFYDTPASLCQPVGLCSVHVQPELHRLCE*AWILH*IFVLVP*TGERTSTLAL 77
I CI T YD A++C G+C + V P + W + + + TGE LA
Sbjct: 279 IKACI--TCYDVQATICLFSGICRLGVVPSV-------WTWNLLLKFIAETGEYEMVLAA 329
Query: 76 Y 74
Y
Sbjct: 330 Y 330
>10_08_0405 - 17657678-17658110,17658219-17659663,17659708-17660076
Length = 748
Score = 27.1 bits (57), Expect = 8.6
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = -3
Query: 329 QLDNHTL*XVNADICCCTIGLFSLNLSMYTTNFLRYTCITLPTC 198
Q D H +N + + + + +Y+T FLR + LPTC
Sbjct: 20 QADQHEALLMNMKLTFMVVLMALMGSIIYSTGFLRLSFRRLPTC 63
>03_05_0697 + 26888791-26888861,26890468-26890579,26891561-26891757,
26892215-26892266,26893530-26893795,26894007-26894229,
26895154-26895327,26895408-26895485,26895566-26895817,
26896138-26898204,26899477-26901322,26901474-26901574,
26902179-26902535,26902681-26902799,26903558-26903559,
26903630-26903662,26903709-26903841,26904285-26904537,
26905688-26905912,26906401-26906466,26907373-26907471,
26908528-26908545,26908546-26908893,26909878-26910354
Length = 2522
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 112 ELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYI 249
E KF + P K D +Q+V + + QQ + V K+F +YI
Sbjct: 1278 ETTWKFLATTNPYEKVDRLQIVSEYMEIQQTDGHVDVSAKEFKMYI 1323
>02_05_0114 + 25958834-25961296
Length = 820
Score = 27.1 bits (57), Expect = 8.6
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = -1
Query: 256 ISQCIQQTFYDTPASLCQPVGLCSVHVQPELHRLCE*AWILH*IFVLVP*TGERTSTLAL 77
I CI T YD A++C G+C + V P + W + + + TGE LA
Sbjct: 161 IKACI--TCYDVQATICLFSGICRLGVVPSV-------WTWNLLLKFIAETGEYEMVLAA 211
Query: 76 Y 74
Y
Sbjct: 212 Y 212
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,402,962
Number of Sequences: 37544
Number of extensions: 254284
Number of successful extensions: 614
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 611
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1071221400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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