Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0894
         (505 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68315-10|CAD59149.1|  109|Caenorhabditis elegans Hypothetical p...   100   5e-22
Z68315-9|CAA92678.1|  106|Caenorhabditis elegans Hypothetical pr...   100   5e-22
Z68315-8|CAA92674.1|  142|Caenorhabditis elegans Hypothetical pr...   100   5e-22
Z68113-4|CAA92148.2| 1503|Caenorhabditis elegans Hypothetical pr...    30   1.1  
AL031637-1|CAA21047.2|  317|Caenorhabditis elegans Hypothetical ...    28   4.4  
Z92817-3|CAJ43914.1|  511|Caenorhabditis elegans Hypothetical pr...    27   5.8  
Z92817-2|CAJ43913.1|  510|Caenorhabditis elegans Hypothetical pr...    27   5.8  
Z50741-2|CAA90610.1|  383|Caenorhabditis elegans Hypothetical pr...    27   7.7  
U23513-3|AAB36862.1|  209|Caenorhabditis elegans Hypothetical pr...    27   7.7  

>Z68315-10|CAD59149.1|  109|Caenorhabditis elegans Hypothetical
           protein F28C6.7c protein.
          Length = 109

 Score =  100 bits (240), Expect = 5e-22
 Identities = 46/89 (51%), Positives = 67/89 (75%)
 Frame = +1

Query: 4   MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 183
           MK N  V+S   K+RK HF+APSH RR +MS+PL+KELR K  ++++PIR DDEV V+RG
Sbjct: 1   MKVNPFVSSDSGKSRKAHFNAPSHERRRIMSAPLTKELRTKHGIRAIPIRTDDEVVVMRG 60

Query: 184 HYKGQQVGKVMQVYRKKFVVYIERFKEKR 270
            +KG   G+V++ YRKKFV++I++   ++
Sbjct: 61  RHKG-NTGRVLRCYRKKFVIHIDKITREK 88



 Score = 33.1 bits (72), Expect = 0.12
 Identities = 13/20 (65%), Positives = 17/20 (85%)
 Frame = +3

Query: 252 EIQREKANGATAYVGIHXSK 311
           +I REKANG+T ++GIH SK
Sbjct: 83  KITREKANGSTVHIGIHPSK 102


>Z68315-9|CAA92678.1|  106|Caenorhabditis elegans Hypothetical
           protein F28C6.7b protein.
          Length = 106

 Score =  100 bits (240), Expect = 5e-22
 Identities = 46/89 (51%), Positives = 67/89 (75%)
 Frame = +1

Query: 4   MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 183
           MK N  V+S   K+RK HF+APSH RR +MS+PL+KELR K  ++++PIR DDEV V+RG
Sbjct: 1   MKVNPFVSSDSGKSRKAHFNAPSHERRRIMSAPLTKELRTKHGIRAIPIRTDDEVVVMRG 60

Query: 184 HYKGQQVGKVMQVYRKKFVVYIERFKEKR 270
            +KG   G+V++ YRKKFV++I++   ++
Sbjct: 61  RHKG-NTGRVLRCYRKKFVIHIDKITREK 88



 Score = 33.1 bits (72), Expect = 0.12
 Identities = 13/20 (65%), Positives = 17/20 (85%)
 Frame = +3

Query: 252 EIQREKANGATAYVGIHXSK 311
           +I REKANG+T ++GIH SK
Sbjct: 83  KITREKANGSTVHIGIHPSK 102


>Z68315-8|CAA92674.1|  142|Caenorhabditis elegans Hypothetical
           protein F28C6.7a protein.
          Length = 142

 Score =  100 bits (240), Expect = 5e-22
 Identities = 46/89 (51%), Positives = 67/89 (75%)
 Frame = +1

Query: 4   MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 183
           MK N  V+S   K+RK HF+APSH RR +MS+PL+KELR K  ++++PIR DDEV V+RG
Sbjct: 1   MKVNPFVSSDSGKSRKAHFNAPSHERRRIMSAPLTKELRTKHGIRAIPIRTDDEVVVMRG 60

Query: 184 HYKGQQVGKVMQVYRKKFVVYIERFKEKR 270
            +KG   G+V++ YRKKFV++I++   ++
Sbjct: 61  RHKG-NTGRVLRCYRKKFVIHIDKITREK 88



 Score = 65.7 bits (153), Expect = 2e-11
 Identities = 29/54 (53%), Positives = 41/54 (75%)
 Frame = +3

Query: 252 EIQREKANGATAYVGIHXSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 413
           +I REKANG+T ++GIH SK  I KLK++KDR+A+++R+A GR    G  KGK+
Sbjct: 83  KITREKANGSTVHIGIHPSKVAITKLKLDKDRRALVERKAAGRSRVTGILKGKH 136


>Z68113-4|CAA92148.2| 1503|Caenorhabditis elegans Hypothetical
           protein E03G2.2 protein.
          Length = 1503

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = -2

Query: 285 LLHHWPFLFESLNVYNKLFTIHLHHFANLLAFVVST 178
           LL  W  LFE  NV   LF I   H   LLA +++T
Sbjct: 74  LLAVWESLFEHKNVTADLFIIPFFHSFTLLALLIAT 109


>AL031637-1|CAA21047.2|  317|Caenorhabditis elegans Hypothetical
           protein Y47H9B.2 protein.
          Length = 317

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -2

Query: 447 KRPPWLWQFPRCIYPCLCQVQPVC 376
           ++ PW ++    +YP LC++  +C
Sbjct: 249 RKYPWYYKMSSAMYPALCELAGIC 272


>Z92817-3|CAJ43914.1|  511|Caenorhabditis elegans Hypothetical
           protein W08G11.3b protein.
          Length = 511

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 5/106 (4%)
 Frame = +1

Query: 1   RMKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQ-----KFNVKSMPIRKDDE 165
           R KF +    + +K       A + I+R+L     S++L       K N++   IRK+DE
Sbjct: 219 RQKFVQGAQLNVKKAEADLQLANAEIQRLLRELDSSQQLENSSITDKRNIEEELIRKEDE 278

Query: 166 VQVVRGHYKGQQVGKVMQVYRKKFVVYIERFKEKRPMVQQHMSAFT 303
           +++   +YK   + K      +K  +   R K+++P V   M+  T
Sbjct: 279 IRL--ANYKSATLLKAANDKIEKLEL---RLKQEKPAVHNEMTVET 319


>Z92817-2|CAJ43913.1|  510|Caenorhabditis elegans Hypothetical
           protein W08G11.3a protein.
          Length = 510

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 5/106 (4%)
 Frame = +1

Query: 1   RMKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQ-----KFNVKSMPIRKDDE 165
           R KF +    + +K       A + I+R+L     S++L       K N++   IRK+DE
Sbjct: 218 RQKFVQGAQLNVKKAEADLQLANAEIQRLLRELDSSQQLENSSITDKRNIEEELIRKEDE 277

Query: 166 VQVVRGHYKGQQVGKVMQVYRKKFVVYIERFKEKRPMVQQHMSAFT 303
           +++   +YK   + K      +K  +   R K+++P V   M+  T
Sbjct: 278 IRL--ANYKSATLLKAANDKIEKLEL---RLKQEKPAVHNEMTVET 318


>Z50741-2|CAA90610.1|  383|Caenorhabditis elegans Hypothetical
           protein F55G7.2 protein.
          Length = 383

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 17/63 (26%), Positives = 29/63 (46%)
 Frame = +1

Query: 7   KFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGH 186
           KFN+ V   RR N K+    P H  +   +  +++++ +     S+P  K      +  H
Sbjct: 94  KFNEAVALFRRDNPKKQLLLPKHWDQSTCTQQVAQKITEIAKDLSVPYPKK-----LNQH 148

Query: 187 YKG 195
           YKG
Sbjct: 149 YKG 151


>U23513-3|AAB36862.1|  209|Caenorhabditis elegans Hypothetical
           protein D2021.8 protein.
          Length = 209

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 15/37 (40%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
 Frame = -2

Query: 204 NLL--AFVVSTYNLNFIVFANRHGFYIEFLS*FLRQG 100
           NLL  A VV ++NL+ ++ A +HG ++E +   L+QG
Sbjct: 11  NLLKPAVVVDSFNLHAVISATQHG-HVESVEAALKQG 46


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,768,043
Number of Sequences: 27780
Number of extensions: 231355
Number of successful extensions: 705
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 702
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)