Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0888
         (622 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00004986BA Cluster: hypothetical protein 286.t00003;...    34   3.1  
UniRef50_Q0CJW9 Cluster: Putative uncharacterized protein; n=1; ...    34   3.1  
UniRef50_Q22M59 Cluster: Putative uncharacterized protein; n=1; ...    29   5.6  
UniRef50_Q95Y69 Cluster: Putative uncharacterized protein; n=1; ...    33   7.3  

>UniRef50_UPI00004986BA Cluster: hypothetical protein 286.t00003;
           n=2; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 286.t00003 - Entamoeba histolytica HM-1:IMSS
          Length = 506

 Score = 33.9 bits (74), Expect = 3.1
 Identities = 18/57 (31%), Positives = 30/57 (52%)
 Frame = +1

Query: 151 FNRMDTMIYNYLNGLLEDYATELMNRLIDNLKLEAHVYLENVTTETAMEEIAKFSTA 321
           FN +   I N + G+L+     L N+L++ +KLE +VY +       M+ I  F+ A
Sbjct: 303 FNNLLDAIRNNIQGILDLLPGNLSNQLLEAIKLEKYVYDDYQIYHATMDTINTFTQA 359


>UniRef50_Q0CJW9 Cluster: Putative uncharacterized protein; n=1;
           Aspergillus terreus NIH2624|Rep: Putative
           uncharacterized protein - Aspergillus terreus (strain
           NIH 2624)
          Length = 1327

 Score = 33.9 bits (74), Expect = 3.1
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = -3

Query: 134 KEILEFDQLQRC*SLLPKLSVPITVDDKTASNSKGRSSTVELTS 3
           ++I E    Q C  L   L  PI+VD  TA+NSK  S++VE+ S
Sbjct: 600 RDIAEDPVAQNCDKLAGSLEAPISVDSSTATNSK--SASVEIIS 641


>UniRef50_Q22M59 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1888

 Score = 29.5 bits (63), Expect(2) = 5.6
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -2

Query: 309  FCNLFHRSFCSNILQIYMCF*FQIINQSVHKFCCVVF 199
            F  L+   FC N +  ++   FQ  N  ++ FCC++F
Sbjct: 1715 FSQLYEEIFCDNYIPDHI---FQSCNVLIYYFCCILF 1748



 Score = 22.2 bits (45), Expect(2) = 5.6
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -2

Query: 363  YSNNIHGRLSAICTCSTEFCNLFHRS 286
            YSN I   LS + +    F NLF R+
Sbjct: 1649 YSNFIFAHLSLVISSVLIFLNLFARA 1674


>UniRef50_Q95Y69 Cluster: Putative uncharacterized protein; n=1;
           Caenorhabditis elegans|Rep: Putative uncharacterized
           protein - Caenorhabditis elegans
          Length = 612

 Score = 32.7 bits (71), Expect = 7.3
 Identities = 13/50 (26%), Positives = 29/50 (58%)
 Frame = +1

Query: 184 LNGLLEDYATELMNRLIDNLKLEAHVYLENVTTETAMEEIAKFSTASTNC 333
           ++ L+ D+  +L+ +  +NL++  H+  EN      ++ I + +T+ST C
Sbjct: 113 ISRLIGDFRQKLLEKSTENLEVRDHLVTENDAIHEIIDRILEKNTSSTTC 162


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 450,465,672
Number of Sequences: 1657284
Number of extensions: 7441767
Number of successful extensions: 18860
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18835
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45221970467
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)