Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0883
(438 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 129 2e-31
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 128 4e-31
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 115 4e-27
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 113 1e-26
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 87 1e-18
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 55 4e-09
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 42 3e-05
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 31 0.078
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 29 0.41
SPAC823.11 |||sphingosine-1-phosphate phosphatase |Schizosacchar... 26 2.9
SPCC18B5.08c |||isoleucine-tRNA ligase|Schizosaccharomyces pombe... 25 5.1
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 5.1
SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting pr... 25 6.7
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos... 25 6.7
SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomy... 25 6.7
SPBC11C11.02 |imp2||contractile ring protein Imp2|Schizosaccharo... 24 8.9
SPCC1682.13 |||SWIRM domain protein|Schizosaccharomyces pombe|ch... 24 8.9
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 129 bits (312), Expect = 2e-31
Identities = 61/73 (83%), Positives = 65/73 (89%)
Frame = +3
Query: 78 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAXXQVAMIPXN 257
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAA QVAM P N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 258 TXFDAKRLIGRKF 296
T FDAKRLIGRKF
Sbjct: 64 TIFDAKRLIGRKF 76
Score = 71.3 bits (167), Expect = 6e-14
Identities = 30/42 (71%), Positives = 36/42 (85%)
Frame = +1
Query: 310 VQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVL 435
VQ+DMKHWPF+V+S GKP ++V YKGE KTF PEE+SSMVL
Sbjct: 81 VQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSMVL 122
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 128 bits (309), Expect = 4e-31
Identities = 60/73 (82%), Positives = 65/73 (89%)
Frame = +3
Query: 78 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAXXQVAMIPXN 257
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAA QVAM P N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 258 TXFDAKRLIGRKF 296
T FDAKRLIGR+F
Sbjct: 64 TIFDAKRLIGRRF 76
Score = 68.9 bits (161), Expect = 3e-13
Identities = 29/42 (69%), Positives = 35/42 (83%)
Frame = +1
Query: 310 VQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVL 435
VQ+DMKHWPF+V+ GKP I+V +KGE KTF PEE+SSMVL
Sbjct: 81 VQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSMVL 122
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 115 bits (276), Expect = 4e-27
Identities = 53/73 (72%), Positives = 61/73 (83%)
Frame = +3
Query: 78 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAXXQVAMIPXN 257
A+GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TERL+GDAA Q AM P N
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNPRN 67
Query: 258 TXFDAKRLIGRKF 296
T FDAKRLIGR++
Sbjct: 68 TVFDAKRLIGRRY 80
Score = 55.6 bits (128), Expect = 3e-09
Identities = 23/42 (54%), Positives = 31/42 (73%)
Frame = +1
Query: 313 QADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 438
Q D+KHWPF+V+ + G P I+V Y GE K F +E+S+MVLT
Sbjct: 86 QKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAMVLT 127
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 113 bits (272), Expect = 1e-26
Identities = 52/72 (72%), Positives = 59/72 (81%)
Frame = +3
Query: 81 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAXXQVAMIPXNT 260
+GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ ERL+G+AA Q P NT
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPENT 97
Query: 261 XFDAKRLIGRKF 296
FD KRLIGRKF
Sbjct: 98 IFDIKRLIGRKF 109
Score = 45.6 bits (103), Expect = 3e-06
Identities = 18/44 (40%), Positives = 31/44 (70%)
Frame = +1
Query: 307 TVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 438
T+ D+K +PF +V+D +P ++V G+ K F PEE+S+M+L+
Sbjct: 113 TMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAMILS 156
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 86.6 bits (205), Expect = 1e-18
Identities = 42/77 (54%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Frame = +3
Query: 69 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAXXQVAM 245
K P +GIDLGTT SC+ + + ++IAN +G RTTPS VAFT D ERL+G +A Q +
Sbjct: 49 KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVI 108
Query: 246 IPXNTXFDAKRLIGRKF 296
P NT F KRLIGR+F
Sbjct: 109 NPENTFFATKRLIGRRF 125
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 55.2 bits (127), Expect = 4e-09
Identities = 26/77 (33%), Positives = 44/77 (57%)
Frame = +3
Query: 66 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAXXQVAM 245
++ VGID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AA A
Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEAS 62
Query: 246 IPXNTXFDAKRLIGRKF 296
NT KRL GR +
Sbjct: 63 NFRNTVGSLKRLAGRTY 79
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 42.3 bits (95), Expect = 3e-05
Identities = 19/70 (27%), Positives = 37/70 (52%)
Frame = +3
Query: 81 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAXXQVAMIPXNT 260
+GI G S + + GK +++AN++GNR PS +++ + G A Q+ N+
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRNADNS 86
Query: 261 XFDAKRLIGR 290
+ + L+G+
Sbjct: 87 VTNFRDLLGK 96
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 31.1 bits (67), Expect = 0.078
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +3
Query: 81 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAXXQVAMIPXN 257
+ ID GT ++ + + G +EI+ R S VAF ER+ G A P +
Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFPAH 84
Query: 258 TXFDAKRLI 284
+ + K L+
Sbjct: 85 SIRNVKELL 93
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 28.7 bits (61), Expect = 0.41
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 73 HPQ*ESIWVPRTLALVSSSTGRWRSSPTTRAT 168
HP S W+P LVS+ W +SP+++ T
Sbjct: 283 HPLYSSSWIPTLHDLVSTRCSVWLTSPSSQRT 314
>SPAC823.11 |||sphingosine-1-phosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 25.8 bits (54), Expect = 2.9
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -1
Query: 159 GRWR*SPPSRAGRHQRKSTWYPDRFLLRVLLPFCIFNQSCYLFLKQLSKRARL 1
G W SP S + H ++++ +F +RVL C+ L K +K+A L
Sbjct: 276 GTWFASPESLSHLHDNLNSYFLLKFFVRVLFGVCMI-----LIWKSFAKQALL 323
>SPCC18B5.08c |||isoleucine-tRNA ligase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 25.0 bits (52), Expect = 5.1
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +3
Query: 168 RTTPSYVAFTDTERLIGDAAXXQVAMIPXNTXFDAKRLIGRKFARC-YCASRHEA 329
R TP + + ER A V MIP N+ RL+G R +C SR A
Sbjct: 437 RATPQWFISLENERKTAIKALDSVKMIPPNS---RARLLGFLNGRPEWCISRQRA 488
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.0 bits (52), Expect = 5.1
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 59 QNGKSTRSRNRSGYHVLLRWCLPARE 136
+NGK T +R +S + W P++E
Sbjct: 477 RNGKKTPTRTKSRMQQFINWFKPSKE 502
>SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting
protein homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 455
Score = 24.6 bits (51), Expect = 6.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 360 ASITDNLERPVLHVGLHSS 304
A + NL RP+ H LHSS
Sbjct: 408 APVIRNLPRPIYHQDLHSS 426
>SPBC119.07 |ppk19||serine/threonine protein kinase
Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1706
Score = 24.6 bits (51), Expect = 6.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 84 GIDLGTTYSCVGVFQHGKVEIIANDQGNR 170
G LG TY+ V Q G VE+ D N+
Sbjct: 1279 GCFLGNTYAFASVTQDGSVEVHRLDVNNQ 1307
>SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1583
Score = 24.6 bits (51), Expect = 6.7
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = -1
Query: 432 HHGTDFLGEKGFVFTLICYLDLRFASITDNLERPVLHVGLHSSIXRTY 289
+H + FL K FV +I +LD AS+ R + + SI RT+
Sbjct: 765 YHSSLFLNLKFFVSLIIGFLDSPQASLRTKCLRIINQMKTIPSILRTH 812
>SPBC11C11.02 |imp2||contractile ring protein
Imp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 670
Score = 24.2 bits (50), Expect = 8.9
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 103 RTLALVSSSTGR-WRSSPTTRATGPLRLMLRSQTPSVSSEMP 225
++L VSS++ + RSSP +L R TP+V + P
Sbjct: 351 QSLTTVSSNSSQNGRSSPKKSFLSKFKLTSRPSTPNVGNTAP 392
>SPCC1682.13 |||SWIRM domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 272
Score = 24.2 bits (50), Expect = 8.9
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 94 WVPRTLALVSSSTGRWRSSPTTRATGP-LRLMLRSQTPSVSS 216
W R + SSS R RSS ++R + P LRS S+SS
Sbjct: 90 WANRHSNVSSSSGSRGRSSVSSRDSSPSYSGALRSAERSISS 131
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,820,732
Number of Sequences: 5004
Number of extensions: 34133
Number of successful extensions: 104
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 103
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 158122380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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