SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0883
         (438 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)                      149   1e-36
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)             146   7e-36
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)                       142   2e-34
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)                      113   8e-26
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)                 82   2e-16
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)              44   4e-05
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)                 42   3e-04
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)                 31   0.42 
SB_9053| Best HMM Match : TIG (HMM E-Value=0)                          29   2.2  
SB_42630| Best HMM Match : Ets (HMM E-Value=0)                         28   2.9  
SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   2.9  
SB_54054| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.9  
SB_50449| Best HMM Match : Drf_DAD (HMM E-Value=0.00043)               27   8.9  

>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
          Length = 1097

 Score =  149 bits (361), Expect = 1e-36
 Identities = 71/78 (91%), Positives = 72/78 (92%)
 Frame = +3

Query: 63  MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAXXQVA 242
           MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAA  QVA
Sbjct: 1   MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60

Query: 243 MIPXNTXFDAKRLIGRKF 296
           M P NT FDAKRLIGRKF
Sbjct: 61  MNPENTVFDAKRLIGRKF 78



 Score = 68.5 bits (160), Expect = 2e-12
 Identities = 28/43 (65%), Positives = 35/43 (81%)
 Frame = +1

Query: 310 VQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 438
           V  DM HWPF V+ +G +PKI+V +KGE K+FFPEE+SSMVLT
Sbjct: 83  VARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSMVLT 125


>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 746

 Score =  146 bits (354), Expect = 7e-36
 Identities = 68/78 (87%), Positives = 71/78 (91%)
 Frame = +3

Query: 63  MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAXXQVA 242
           M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAA  QVA
Sbjct: 1   MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60

Query: 243 MIPXNTXFDAKRLIGRKF 296
           M P NT FDAKRLIGR+F
Sbjct: 61  MNPTNTIFDAKRLIGRRF 78



 Score = 63.3 bits (147), Expect = 8e-11
 Identities = 26/37 (70%), Positives = 31/37 (83%)
 Frame = +1

Query: 310 VQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEV 420
           V+ DMKHW FEVV++ G+PK+KV YKGE KTFF EEV
Sbjct: 83  VKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEV 119



 Score = 54.0 bits (124), Expect = 5e-08
 Identities = 23/32 (71%), Positives = 28/32 (87%)
 Frame = +1

Query: 340 EVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVL 435
           EVV++ G+PK+KV YKGE KTFF EE+SSMVL
Sbjct: 118 EVVNEAGRPKVKVEYKGETKTFFAEEISSMVL 149


>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
          Length = 640

 Score =  142 bits (343), Expect = 2e-34
 Identities = 65/78 (83%), Positives = 71/78 (91%)
 Frame = +3

Query: 63  MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAXXQVA 242
           M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAA  QVA
Sbjct: 1   MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60

Query: 243 MIPXNTXFDAKRLIGRKF 296
           + P NT FDAKRLIGR++
Sbjct: 61  LNPENTIFDAKRLIGRRY 78



 Score = 70.9 bits (166), Expect = 4e-13
 Identities = 31/44 (70%), Positives = 37/44 (84%)
 Frame = +1

Query: 304 ATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVL 435
           ATVQ+DMK WPF+++SD  KPKI+V YKGE KTF  EE+SSMVL
Sbjct: 81  ATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSMVL 124


>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
          Length = 1327

 Score =  113 bits (271), Expect = 8e-26
 Identities = 54/73 (73%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
 Frame = +3

Query: 81  VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAXXQVAMIPXN 257
           +GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+  ERLIGD A  Q+   P N
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPEN 763

Query: 258 TXFDAKRLIGRKF 296
           T FDAKRLIGR +
Sbjct: 764 TVFDAKRLIGRSW 776



 Score = 49.2 bits (112), Expect = 1e-06
 Identities = 23/44 (52%), Positives = 31/44 (70%)
 Frame = +1

Query: 307 TVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 438
           +VQ D+K +PF+VV    KP ++V  K E KTF  EE+S+MVLT
Sbjct: 780 SVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAMVLT 823


>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
          Length = 437

 Score = 81.8 bits (193), Expect = 2e-16
 Identities = 37/80 (46%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
 Frame = +3

Query: 69  KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAXXQVA 242
           K   +GIDLGTTYSCVG +Q   G+++I +++  ++  PS VAFTD   L+G+ A  Q  
Sbjct: 30  KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89

Query: 243 MIPXNTXFDAKRLIGRKFAR 302
           + P NT +DAKR IG+ F +
Sbjct: 90  INPKNTIYDAKRFIGKTFTK 109


>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1068

 Score = 44.4 bits (100), Expect = 4e-05
 Identities = 20/52 (38%), Positives = 31/52 (59%)
 Frame = +3

Query: 81  VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAXXQ 236
           VG D+G     + V + G +E +AN+  +R TPS+V+  D +RLIG +   Q
Sbjct: 4   VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55


>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
          Length = 592

 Score = 41.5 bits (93), Expect = 3e-04
 Identities = 18/28 (64%), Positives = 22/28 (78%)
 Frame = +3

Query: 132 GKVEIIANDQGNRTTPSYVAFTDTERLI 215
           G   IIAND G+R TP+ VAF+DTE+LI
Sbjct: 83  GNTTIIANDAGDRVTPAMVAFSDTEKLI 110


>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
          Length = 212

 Score = 31.1 bits (67), Expect = 0.42
 Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
 Frame = +3

Query: 141 EIIANDQGNRTTPSYVAFT-DTERL 212
           ++I N +G+RTTPS VAFT + ERL
Sbjct: 7   KVIENAEGSRTTPSVVAFTPEGERL 31


>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
          Length = 2990

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +3

Query: 9    HVC*VVLRTSNKTD*KYKMAKAPAVGIDL 95
            HVC +V  T  K   K  ++K PA GI+L
Sbjct: 1200 HVCNIVSNTETKITCKLDVSKTPAPGIEL 1228


>SB_42630| Best HMM Match : Ets (HMM E-Value=0)
          Length = 631

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = +1

Query: 91  IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPXT 234
           IW P+   L++S     R+S +     PLR  L    P VSS +P  T
Sbjct: 42  IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 89


>SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 977

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = +1

Query: 91  IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPXT 234
           IW P+   L++S     R+S +     PLR  L    P VSS +P  T
Sbjct: 388 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 435


>SB_54054| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 4232

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -1

Query: 165  CPGRWR*SPPSRAGRHQRKSTWY 97
            C GRW     S AG  ++KS WY
Sbjct: 3726 CVGRWWKEIKSLAGVSEKKSRWY 3748


>SB_50449| Best HMM Match : Drf_DAD (HMM E-Value=0.00043)
          Length = 801

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -2

Query: 140 HLPVLEDTNARVRGTQIDSYCGCFCHFVF 54
           +LP +E +NAR  G ++ +Y   +  FVF
Sbjct: 293 NLPGIEKSNARTMGNRLQAYQSSYQVFVF 321


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,668,565
Number of Sequences: 59808
Number of extensions: 298966
Number of successful extensions: 756
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 754
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 847047381
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -