Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0882
         (657 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y08163-1|CAA69355.1|  192|Anopheles gambiae hypothetical protein...    27   0.69 
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    23   6.4  

>Y08163-1|CAA69355.1|  192|Anopheles gambiae hypothetical protein
           protein.
          Length = 192

 Score = 26.6 bits (56), Expect = 0.69
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +2

Query: 278 KNLKNASRNEDLSPLHWRVLASNTGSIRNNWTVGSNIGQKNTHSL 412
           K L      ++   L   + AS+TGS  N W   +NIG  NT+ L
Sbjct: 97  KGLATIESEKEQKYLESLLKASSTGS--NYWIGATNIGASNTNKL 139


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
 Frame = -1

Query: 504 GTFGSNPHEVNIQTLDISLEMRILVKELLPFSEWV---FFCP-IFEPTVQLFRIEPVF 343
           G+ G N  +  ++ L +  ++R+L  E LP+   V      P +F   VQ  +  P+F
Sbjct: 241 GSGGFNATDPTMERLSLEEKLRVLFYEFLPYLAIVCMNLVVPQLFNYLVQYEKYSPLF 298


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 720,356
Number of Sequences: 2352
Number of extensions: 15550
Number of successful extensions: 43
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)