Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0881
         (528 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0870 + 20431215-20431419,20432559-20433439,20433829-204339...    32   0.33 
12_01_0974 - 9808192-9808455,9809023-9809172,9810892-9811488           29   1.7  
02_04_0615 - 24410124-24410290,24410592-24410623,24410717-244108...    28   4.0  
01_06_0012 + 25575196-25575198,25575769-25575945,25576034-255760...    27   7.1  
01_06_0004 + 25507739-25508206,25509346-25509477,25509910-255100...    27   7.1  
04_03_0266 + 13648287-13649099,13649186-13649524                       27   9.3  
02_05_0691 - 30949234-30949243,30949613-30950001,30950425-309504...    27   9.3  

>04_03_0870 +
           20431215-20431419,20432559-20433439,20433829-20433990,
           20434742-20435001,20435110-20435200,20435487-20435675
          Length = 595

 Score = 31.9 bits (69), Expect = 0.33
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = -3

Query: 313 DFVPPPDLSQNSNFEHNFLSSENVQNSPLFRKVFYNLFFASIRKHKFWSN 164
           D VPP  +       ++F   +N  N+P++ K +Y+LF+    K   W N
Sbjct: 43  DGVPPSIVDSELRTGYHFQPPKNWINAPMYYKGWYHLFYQYNPKGAVWGN 92


>12_01_0974 - 9808192-9808455,9809023-9809172,9810892-9811488
          Length = 336

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 21/75 (28%), Positives = 39/75 (52%)
 Frame = -1

Query: 396 FIVQLLRSLLFCLSFGDQFVSELVGQEAILFPLQI*AKTVILNTISYPAKMYKTVLCFEK 217
           F  Q      F + F +Q+++E +  E +L        TV+ +T+SYP ++ K+    + 
Sbjct: 241 FSTQFAEFEAFSIPFSEQYINEHLPIEDLLV-------TVVGSTVSYPMRLMKS-KDKQA 292

Query: 216 FFTTFFSRLYGNTNF 172
            FTT +++L G+  F
Sbjct: 293 TFTTGWNKLVGDKLF 307


>02_04_0615 -
           24410124-24410290,24410592-24410623,24410717-24410811,
           24413636-24413706,24414278-24414410,24414488-24414551,
           24414628-24414690,24414784-24414924,24415130-24415203,
           24415346-24415470,24415545-24415686,24415775-24415777
          Length = 369

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 21/94 (22%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
 Frame = +3

Query: 84  KNFLEYKVDNYKKVCIVEVNFDAVRAEFDQNLCFRIDAKKRL*KTFRNKGLFCTFSLDRK 263
           K   E K+    + C+ +        ++ +N+  +I+ K     T+R   L    ++  +
Sbjct: 52  KRVCETKLGLVSQCCLPKNVKTDTNIKYLENIALKINVK-----TYRQSFLVLMLAIPHQ 106

Query: 264 LCSKLLF--WLKSGGGTKSPLGQLVRKQTDHRTI 359
            C++ L   WL    G KSP  +L+  Q + + I
Sbjct: 107 GCTRHLLQEWLDQSTGQKSPHIELISAQLERQEI 140


>01_06_0012 +
           25575196-25575198,25575769-25575945,25576034-25576078,
           25576164-25576371,25576685-25576875,25577078-25577473
          Length = 339

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -3

Query: 430 RLLKMFPKSLRFYSSITEVVAFLFIVR*SVC 338
           R+ ++ P +LRFY S   VVA + IV  S C
Sbjct: 68  RMPQVKPTALRFYGSFNVVVAGITIVNSSQC 98


>01_06_0004 +
           25507739-25508206,25509346-25509477,25509910-25510086,
           25510175-25510219,25510305-25510512,25510766-25510825,
           25510826-25511016,25511219-25511614
          Length = 558

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -3

Query: 430 RLLKMFPKSLRFYSSITEVVAFLFIVR*SVC 338
           R+ ++ P +LRFY S   VVA + IV  S C
Sbjct: 267 RMPQVKPTALRFYGSFNVVVAGITIVNSSQC 297


>04_03_0266 + 13648287-13649099,13649186-13649524
          Length = 383

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 20/71 (28%), Positives = 27/71 (38%), Gaps = 1/71 (1%)
 Frame = -3

Query: 325 WPR-GDFVPPPDLSQNSNFEHNFLSSENVQNSPLFRKVFYNLFFASIRKHKFWSNSARTA 149
           WP  G+  P PD  +   F H F    ++  S  FR +   L F  I  H    NS    
Sbjct: 16  WPAFGEAFPTPDTHEVVVFSHFFYGGFSLPTSRFFRGI---LSFYGISLHHLNPNSIVHI 72

Query: 148 SKLTSTIQTFL 116
           +      + FL
Sbjct: 73  ANFIHACEAFL 83


>02_05_0691 -
           30949234-30949243,30949613-30950001,30950425-30950449,
           30950594-30950688,30950842-30951359,30951652-30951736,
           30951842-30952633
          Length = 637

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -3

Query: 304 PPPDLSQNSNFEHNFLSSENVQNSP 230
           PPPD S + N  H+  S+ N + SP
Sbjct: 317 PPPDASPSVNKRHSSSSARNKKQSP 341


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,934,958
Number of Sequences: 37544
Number of extensions: 235072
Number of successful extensions: 640
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 640
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1166441080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)