Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0880
(694 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 23 2.4
AJ876407-1|CAI45288.1| 590|Tribolium castaneum phosphatase prot... 23 3.1
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 22 4.1
EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxyla... 21 7.2
AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein. 21 7.2
AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. 21 7.2
AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A prot... 21 7.2
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 21 7.2
AF017414-2|AAB70261.1| 150|Tribolium castaneum abdominal-A prot... 21 7.2
AF017414-1|AAB70260.1| 209|Tribolium castaneum abdominal-AII pr... 21 7.2
AM292339-1|CAL23151.2| 387|Tribolium castaneum gustatory recept... 21 9.6
AM292338-1|CAL23150.2| 372|Tribolium castaneum gustatory recept... 21 9.6
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 23.0 bits (47), Expect = 2.4
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -2
Query: 651 LQTDKIPPFLSERFGVNL 598
L+ K+PPFL+E + V+L
Sbjct: 530 LKNKKLPPFLAEIWDVDL 547
>AJ876407-1|CAI45288.1| 590|Tribolium castaneum phosphatase
protein.
Length = 590
Score = 22.6 bits (46), Expect = 3.1
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Frame = -2
Query: 660 LQHLQTDKIPPFLS----ERFGVNLYL--NSIRFDSAFLQHPLQLLLV 535
L++L+TD IP FLS E+ V L + F S F Q +++ ++
Sbjct: 200 LEYLKTDLIPMFLSLTQDEQDSVRLLAVEACVSFASLFQQEDIEMFVM 247
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 22.2 bits (45), Expect = 4.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -3
Query: 452 PNDYNRHLI 426
PN YNRHL+
Sbjct: 509 PNTYNRHLV 517
>EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxylase
protein.
Length = 475
Score = 21.4 bits (43), Expect = 7.2
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = +2
Query: 401 LYLMHWPIGLNADYSHSDVDFMETWRGLE 487
LYL H G DY H + +R L+
Sbjct: 331 LYLKHEQQGAAPDYRHWQIPLGRRFRALK 359
>AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein.
Length = 209
Score = 21.4 bits (43), Expect = 7.2
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -2
Query: 351 ATSVLRCWVFHSL 313
AT++LR W+F L
Sbjct: 189 ATNILRAWLFQHL 201
>AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein.
Length = 456
Score = 21.4 bits (43), Expect = 7.2
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -2
Query: 351 ATSVLRCWVFHSL 313
AT++LR W+F L
Sbjct: 345 ATNILRAWLFQHL 357
>AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A
protein.
Length = 284
Score = 21.4 bits (43), Expect = 7.2
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 587 ASGLIVPSFSTLSNCCL 537
ASG +VPSFS+ ++ L
Sbjct: 23 ASGSMVPSFSSTASSAL 39
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 21.4 bits (43), Expect = 7.2
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 587 ASGLIVPSFSTLSNCCL 537
ASG +VPSFS+ ++ L
Sbjct: 82 ASGSMVPSFSSTASSAL 98
>AF017414-2|AAB70261.1| 150|Tribolium castaneum abdominal-A
protein.
Length = 150
Score = 21.4 bits (43), Expect = 7.2
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 587 ASGLIVPSFSTLSNCCL 537
ASG +VPSFS+ ++ L
Sbjct: 23 ASGSMVPSFSSTASSAL 39
>AF017414-1|AAB70260.1| 209|Tribolium castaneum abdominal-AII
protein.
Length = 209
Score = 21.4 bits (43), Expect = 7.2
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 587 ASGLIVPSFSTLSNCCL 537
ASG +VPSFS+ ++ L
Sbjct: 82 ASGSMVPSFSSTASSAL 98
>AM292339-1|CAL23151.2| 387|Tribolium castaneum gustatory receptor
candidate 18 protein.
Length = 387
Score = 21.0 bits (42), Expect = 9.6
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -2
Query: 594 LNSIRFDSAFLQHPLQLLLVEVRQSDAFNI 505
LNS+ F + + P+ L +V+ S FN+
Sbjct: 261 LNSVLFQNVYKPLPIVLSIVKNCLSYCFNL 290
>AM292338-1|CAL23150.2| 372|Tribolium castaneum gustatory receptor
candidate 17 protein.
Length = 372
Score = 21.0 bits (42), Expect = 9.6
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -2
Query: 594 LNSIRFDSAFLQHPLQLLLVEVRQSDAFNI 505
LNS+ F + + P+ L +V+ S FN+
Sbjct: 261 LNSVLFQNVYKPLPIVLSIVKNCLSYCFNL 290
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,483
Number of Sequences: 336
Number of extensions: 3161
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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