Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0879
         (292 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    27   0.14 
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    27   0.14 
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           22   4.1  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          22   4.1  
AJ271117-1|CAB88872.1|  355|Anopheles gambiae serine protease pr...    22   4.1  
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    22   5.4  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    22   5.4  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           22   5.4  
AM042695-1|CAJ14970.1|  396|Anopheles gambiae 3-hydroxykynurenin...    21   9.4  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    21   9.4  

>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 27.1 bits (57), Expect = 0.14
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +3

Query: 33  RWQTGHARGHRPPHSLRAGNDGR 101
           RW    A G R PH  RAG  G+
Sbjct: 117 RWTRSGATGRRQPHPYRAGRVGQ 139


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 27.1 bits (57), Expect = 0.14
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +3

Query: 33  RWQTGHARGHRPPHSLRAGNDGR 101
           RW    A G R PH  RAG  G+
Sbjct: 117 RWTRSGATGRRQPHPYRAGRVGQ 139


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 14/44 (31%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
 Frame = -2

Query: 177  NEVNYGCCPS--GDRSPGALVEVIGSFSAHHFQLEVSVGVDAPG 52
            NE  Y       G   PG L EV G  +     ++   GV  PG
Sbjct: 1107 NETEYSSSDQLMGGGKPGPLKEVNGVVTRKGAPMKFGPGVSGPG 1150


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 110 PMTSTRAPGLRSPEGQQP 163
           PM +  A G   PEGQ+P
Sbjct: 578 PMLANHAGGGAIPEGQEP 595


>AJ271117-1|CAB88872.1|  355|Anopheles gambiae serine protease
           protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 124 CRSHRQF*RPSFPARSECG 68
           C S +Q    SFP   ECG
Sbjct: 78  CASEQQTRTSSFPTSPECG 96


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 177 NEVNYGCCP 151
           NE+ Y CCP
Sbjct: 190 NEIYYNCCP 198


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 177 NEVNYGCCP 151
           NE+ Y CCP
Sbjct: 222 NEIYYNCCP 230


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -3

Query: 47  TSLPAASMVRVPPGM 3
           +SLP +S++  PPGM
Sbjct: 258 SSLPLSSVIGGPPGM 272


>AM042695-1|CAJ14970.1|  396|Anopheles gambiae 3-hydroxykynurenine
           transaminase protein.
          Length = 396

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/35 (25%), Positives = 18/35 (51%)
 Frame = -2

Query: 114 IGSFSAHHFQLEVSVGVDAPGHDQFASGIDGPCAS 10
           +  ++ ++F LEV  G+       +  GI G C++
Sbjct: 331 VSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECST 365


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 10/28 (35%), Positives = 14/28 (50%), Gaps = 4/28 (14%)
 Frame = -3

Query: 74  VWGSMPPGMTSLPAASM----VRVPPGM 3
           VWGS  PG+ +   A +    V  PP +
Sbjct: 69  VWGSTVPGLVAAKVAGIDFISVYAPPSL 96


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 351,116
Number of Sequences: 2352
Number of extensions: 7115
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 17819379
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)