Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0879
(292 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68882-11|CAA93104.1| 520|Caenorhabditis elegans Hypothetical p... 87 1e-18
AB040993-1|BAB21561.1| 520|Caenorhabditis elegans CeCRMP/DHP-2 ... 87 1e-18
Z71266-9|CAD24483.1| 489|Caenorhabditis elegans Hypothetical pr... 78 9e-16
AB040992-1|BAB21560.1| 489|Caenorhabditis elegans CeCRMP/DHP-1 ... 78 9e-16
Z14148-3|CAA78522.1| 523|Caenorhabditis elegans hypothetical po... 34 0.015
Z14148-2|CAA78521.1| 679|Caenorhabditis elegans hypothetical po... 34 0.015
Z14148-1|CAA78520.1| 854|Caenorhabditis elegans hypothetical po... 34 0.015
Z14146-3|CAA78518.1| 523|Caenorhabditis elegans hypothetical pr... 34 0.015
Z14146-2|CAA78517.1| 679|Caenorhabditis elegans hypothetical pr... 34 0.015
Z14146-1|CAA78516.1| 854|Caenorhabditis elegans unc-33 protein. 34 0.015
AC006737-1|AAM97965.1| 854|Caenorhabditis elegans Uncoordinated... 34 0.015
U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in bl... 32 0.079
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 31 0.18
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 31 0.18
U58742-4|AAB36856.1| 242|Caenorhabditis elegans Activated in bl... 28 0.97
U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-... 27 2.2
U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-... 27 2.2
AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical ... 27 3.0
AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical ... 27 3.0
AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical ... 26 3.9
AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical ... 26 3.9
AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical ... 26 3.9
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 26 5.2
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 26 5.2
AF016427-8|AAB65355.1| 513|Caenorhabditis elegans Hypothetical ... 26 5.2
AF000196-8|AAL11096.1| 624|Caenorhabditis elegans Hypothetical ... 26 5.2
Z73971-12|CAC42267.1| 718|Caenorhabditis elegans Hypothetical p... 25 9.1
Z72515-6|CAA96686.2| 718|Caenorhabditis elegans Hypothetical pr... 25 9.1
Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical pr... 25 9.1
U80844-4|AAB37974.1| 192|Caenorhabditis elegans Hypothetical pr... 25 9.1
AF040648-7|AAK26140.1| 386|Caenorhabditis elegans Lethal protei... 25 9.1
>Z68882-11|CAA93104.1| 520|Caenorhabditis elegans Hypothetical
protein C47E12.8 protein.
Length = 520
Score = 87.4 bits (207), Expect = 1e-18
Identities = 42/93 (45%), Positives = 52/93 (55%)
Frame = +1
Query: 13 GTRTIDAAGKLVMPGGIDPHTHFELEMMGAKTADDFYKXXXXXXXXXXXXIIDFVLPEKG 192
G +DA +LV+PGGIDPHTH +L MG DDF++ IIDFV+P KG
Sbjct: 40 GLEVVDATDRLVIPGGIDPHTHMQLPFMGEIAKDDFHRGTEAAVAGGTTMIIDFVIPTKG 99
Query: 193 QSLLEAYXNWXEKAV**GVLRYGLHVGVTWWSP 291
+SLL AY W A V YGL + +T W P
Sbjct: 100 ESLLVAYDRWRGWADPKVVCDYGLSMAITSWGP 132
>AB040993-1|BAB21561.1| 520|Caenorhabditis elegans CeCRMP/DHP-2
protein.
Length = 520
Score = 87.4 bits (207), Expect = 1e-18
Identities = 42/93 (45%), Positives = 52/93 (55%)
Frame = +1
Query: 13 GTRTIDAAGKLVMPGGIDPHTHFELEMMGAKTADDFYKXXXXXXXXXXXXIIDFVLPEKG 192
G +DA +LV+PGGIDPHTH +L MG DDF++ IIDFV+P KG
Sbjct: 40 GLEVVDATDRLVIPGGIDPHTHMQLPFMGEIAKDDFHRGTEAAVAGGTTMIIDFVIPTKG 99
Query: 193 QSLLEAYXNWXEKAV**GVLRYGLHVGVTWWSP 291
+SLL AY W A V YGL + +T W P
Sbjct: 100 ESLLVAYDRWRGWADPKVVCDYGLSMAITSWGP 132
>Z71266-9|CAD24483.1| 489|Caenorhabditis elegans Hypothetical
protein R06C7.3 protein.
Length = 489
Score = 78.2 bits (184), Expect = 9e-16
Identities = 40/94 (42%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Frame = +1
Query: 16 TRTIDAAGKLVMPGGIDPHTHFELEMMGAKTADDFYKXXXXXXXXXXXXIIDFVLPE--K 189
T IDA +LV+PGGIDPHTH ++ MG T DDF K IIDF P+
Sbjct: 43 TEVIDATDRLVIPGGIDPHTHMQMPYMGEVTKDDFLKGTEAAVAGGTTMIIDFCCPDHRN 102
Query: 190 GQSLLEAYXNWXEKAV**GVLRYGLHVGVTWWSP 291
G+SL+ Y W A YGL V +T W P
Sbjct: 103 GESLIAGYNRWRSWADPKVCCDYGLSVAITMWRP 136
>AB040992-1|BAB21560.1| 489|Caenorhabditis elegans CeCRMP/DHP-1
protein.
Length = 489
Score = 78.2 bits (184), Expect = 9e-16
Identities = 40/94 (42%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Frame = +1
Query: 16 TRTIDAAGKLVMPGGIDPHTHFELEMMGAKTADDFYKXXXXXXXXXXXXIIDFVLPE--K 189
T IDA +LV+PGGIDPHTH ++ MG T DDF K IIDF P+
Sbjct: 43 TEVIDATDRLVIPGGIDPHTHMQMPYMGEVTKDDFLKGTEAAVAGGTTMIIDFCCPDHRN 102
Query: 190 GQSLLEAYXNWXEKAV**GVLRYGLHVGVTWWSP 291
G+SL+ Y W A YGL V +T W P
Sbjct: 103 GESLIAGYNRWRSWADPKVCCDYGLSVAITMWRP 136
>Z14148-3|CAA78522.1| 523|Caenorhabditis elegans hypothetical
polypeptide III protein.
Length = 523
Score = 34.3 bits (75), Expect = 0.015
Identities = 20/68 (29%), Positives = 30/68 (44%)
Frame = +1
Query: 7 PGGTRTIDAAGKLVMPGGIDPHTHFELEMMGAKTADDFYKXXXXXXXXXXXXIIDFVLPE 186
P G +DAAGKL +P GID +T + + DD I++ V P
Sbjct: 39 PEGAEVLDAAGKLALPAGIDVYT-----QVTDSSVDDLSTGCKSAIAGGTGTIVEVVRPR 93
Query: 187 KGQSLLEA 210
+S++ A
Sbjct: 94 GAESVVSA 101
>Z14148-2|CAA78521.1| 679|Caenorhabditis elegans hypothetical
polypeptide II protein.
Length = 679
Score = 34.3 bits (75), Expect = 0.015
Identities = 20/68 (29%), Positives = 30/68 (44%)
Frame = +1
Query: 7 PGGTRTIDAAGKLVMPGGIDPHTHFELEMMGAKTADDFYKXXXXXXXXXXXXIIDFVLPE 186
P G +DAAGKL +P GID +T + + DD I++ V P
Sbjct: 195 PEGAEVLDAAGKLALPAGIDVYT-----QVTDSSVDDLSTGCKSAIAGGTGTIVEVVRPR 249
Query: 187 KGQSLLEA 210
+S++ A
Sbjct: 250 GAESVVSA 257
>Z14148-1|CAA78520.1| 854|Caenorhabditis elegans hypothetical
polypeptide I protein.
Length = 854
Score = 34.3 bits (75), Expect = 0.015
Identities = 20/68 (29%), Positives = 30/68 (44%)
Frame = +1
Query: 7 PGGTRTIDAAGKLVMPGGIDPHTHFELEMMGAKTADDFYKXXXXXXXXXXXXIIDFVLPE 186
P G +DAAGKL +P GID +T + + DD I++ V P
Sbjct: 370 PEGAEVLDAAGKLALPAGIDVYT-----QVTDSSVDDLSTGCKSAIAGGTGTIVEVVRPR 424
Query: 187 KGQSLLEA 210
+S++ A
Sbjct: 425 GAESVVSA 432
>Z14146-3|CAA78518.1| 523|Caenorhabditis elegans hypothetical
protein.
Length = 523
Score = 34.3 bits (75), Expect = 0.015
Identities = 20/68 (29%), Positives = 30/68 (44%)
Frame = +1
Query: 7 PGGTRTIDAAGKLVMPGGIDPHTHFELEMMGAKTADDFYKXXXXXXXXXXXXIIDFVLPE 186
P G +DAAGKL +P GID +T + + DD I++ V P
Sbjct: 39 PEGAEVLDAAGKLALPAGIDVYT-----QVTDSSVDDLSTGCKSAIAGGTGTIVEVVRPR 93
Query: 187 KGQSLLEA 210
+S++ A
Sbjct: 94 GAESVVSA 101
>Z14146-2|CAA78517.1| 679|Caenorhabditis elegans hypothetical
protein.
Length = 679
Score = 34.3 bits (75), Expect = 0.015
Identities = 20/68 (29%), Positives = 30/68 (44%)
Frame = +1
Query: 7 PGGTRTIDAAGKLVMPGGIDPHTHFELEMMGAKTADDFYKXXXXXXXXXXXXIIDFVLPE 186
P G +DAAGKL +P GID +T + + DD I++ V P
Sbjct: 195 PEGAEVLDAAGKLALPAGIDVYT-----QVTDSSVDDLSTGCKSAIAGGTGTIVEVVRPR 249
Query: 187 KGQSLLEA 210
+S++ A
Sbjct: 250 GAESVVSA 257
>Z14146-1|CAA78516.1| 854|Caenorhabditis elegans unc-33 protein.
Length = 854
Score = 34.3 bits (75), Expect = 0.015
Identities = 20/68 (29%), Positives = 30/68 (44%)
Frame = +1
Query: 7 PGGTRTIDAAGKLVMPGGIDPHTHFELEMMGAKTADDFYKXXXXXXXXXXXXIIDFVLPE 186
P G +DAAGKL +P GID +T + + DD I++ V P
Sbjct: 370 PEGAEVLDAAGKLALPAGIDVYT-----QVTDSSVDDLSTGCKSAIAGGTGTIVEVVRPR 424
Query: 187 KGQSLLEA 210
+S++ A
Sbjct: 425 GAESVVSA 432
>AC006737-1|AAM97965.1| 854|Caenorhabditis elegans Uncoordinated
protein 33 protein.
Length = 854
Score = 34.3 bits (75), Expect = 0.015
Identities = 20/68 (29%), Positives = 30/68 (44%)
Frame = +1
Query: 7 PGGTRTIDAAGKLVMPGGIDPHTHFELEMMGAKTADDFYKXXXXXXXXXXXXIIDFVLPE 186
P G +DAAGKL +P GID +T + + DD I++ V P
Sbjct: 370 PEGAEVLDAAGKLALPAGIDVYT-----QVTDSSVDDLSTGCKSAIAGGTGTIVEVVRPR 424
Query: 187 KGQSLLEA 210
+S++ A
Sbjct: 425 GAESVVSA 432
>U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 2 protein.
Length = 572
Score = 31.9 bits (69), Expect = 0.079
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -1
Query: 136 PGCPCRSHRQF*RPSFPARSECGGRCPRA*PVCQRHRWSVCLQ 8
P C + Q +PS P +C C + PVCQ+ S CLQ
Sbjct: 334 PQCQQQCAPQCYQPSAPQCQQCQNTCQQFAPVCQQQCASQCLQ 376
Score = 27.9 bits (59), Expect = 1.3
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -1
Query: 136 PGCPCRSHRQF*RPSFPARSECGGRCPRA*PVCQRHRWSVCLQ 8
P C + Q +P+ P +C C + PVC++ S+C Q
Sbjct: 364 PVCQQQCASQCLQPAAPQCQQCQNTCQQFAPVCEQQCASLCHQ 406
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 30.7 bits (66), Expect = 0.18
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -1
Query: 136 PGCPCRSHRQF*RPSFPARSECGGRCPRA*PVCQRHRWSVCLQE 5
P C + Q +PS P +C C +A PVCQ+ C Q+
Sbjct: 244 PQCQQQCAPQCQQPSAPQCQQCQNTCQQAAPVCQQQCAPQCQQQ 287
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 30.7 bits (66), Expect = 0.18
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -1
Query: 136 PGCPCRSHRQF*RPSFPARSECGGRCPRA*PVCQRHRWSVCLQE 5
P C + Q +PS P +C C +A PVCQ+ C Q+
Sbjct: 244 PQCQQQCAPQCQQPSAPQCQQCQNTCQQAAPVCQQQCAPQCQQQ 287
>U58742-4|AAB36856.1| 242|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 3 protein.
Length = 242
Score = 28.3 bits (60), Expect = 0.97
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = -1
Query: 136 PGCPCRSHRQF*RPSFPARSECGGRCPRA*PVCQRHRWSVCLQE 5
P C + Q +P+ P +C C ++ PVCQ+ C Q+
Sbjct: 66 PQCQQQCAPQCQQPAAPQCQQCQNTCQQSAPVCQQQCAPQCQQQ 109
>U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform b protein.
Length = 1169
Score = 27.1 bits (57), Expect = 2.2
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 7 PGGTRTIDAAGKLVMPGGIDPH 72
PG T D +GKL++ G++P+
Sbjct: 1088 PGNEATTDGSGKLILCNGLEPN 1109
>U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform a protein.
Length = 1876
Score = 27.1 bits (57), Expect = 2.2
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 7 PGGTRTIDAAGKLVMPGGIDPH 72
PG T D +GKL++ G++P+
Sbjct: 1185 PGNEATTDGSGKLILCNGLEPN 1206
>AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.6 protein.
Length = 335
Score = 26.6 bits (56), Expect = 3.0
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = -1
Query: 136 PGCPCRSHRQF*RPSFPARSECGGRCPRA*PVCQRHRWSVC 14
P C + Q +PS P +C C + PVCQ+ C
Sbjct: 157 PQCQQQCAPQCQQPSAPQCQQCQNTCQQYAPVCQQQCTPQC 197
>AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.3 protein.
Length = 335
Score = 26.6 bits (56), Expect = 3.0
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = -1
Query: 136 PGCPCRSHRQF*RPSFPARSECGGRCPRA*PVCQRHRWSVC 14
P C + Q +PS P +C C + PVCQ+ C
Sbjct: 157 PQCQQQCAPQCQQPSAPQCQQCQNTCQQYAPVCQQQCTPQC 197
>AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.5 protein.
Length = 335
Score = 26.2 bits (55), Expect = 3.9
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -1
Query: 136 PGCPCRSHRQF*RPSFPARSECGGRCPRA*PVCQR 32
P C + Q +PS P +C C + PVCQ+
Sbjct: 157 PQCQQQCAPQCQQPSAPQCQQCQNTCQQYAPVCQQ 191
>AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.4 protein.
Length = 335
Score = 26.2 bits (55), Expect = 3.9
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -1
Query: 136 PGCPCRSHRQF*RPSFPARSECGGRCPRA*PVCQR 32
P C + Q +PS P +C C + PVCQ+
Sbjct: 157 PQCQQQCAPQCQQPSAPQCQQCQNTCQQYAPVCQQ 191
>AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical
protein Y5H2A.4 protein.
Length = 558
Score = 26.2 bits (55), Expect = 3.9
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -1
Query: 136 PGCPCRSHRQF*RPSFPARSECGGRCPRA*PVCQR 32
P C + Q +PS P +C C + PVCQ+
Sbjct: 381 PECQQQCAPQCQQPSAPQCQQCQNTCQQFAPVCQQ 415
Score = 25.0 bits (52), Expect = 9.1
Identities = 16/50 (32%), Positives = 20/50 (40%), Gaps = 7/50 (14%)
Frame = -1
Query: 136 PGCPCRSHRQF*RPSFPARS-------ECGGRCPRA*PVCQRHRWSVCLQ 8
P C HRQ + FP + EC C +A P CQ+ C Q
Sbjct: 202 PQCQQTCHRQCVQQQFPVQQCTQQCTLECQPTCQQAVPQCQQQCAPQCQQ 251
Score = 25.0 bits (52), Expect = 9.1
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = -1
Query: 136 PGCPCRSHRQF*RPSFPARSECGGRCPRA*PVCQRHRWSVCLQ 8
P C + Q PS P +C C + PVCQ C Q
Sbjct: 310 PVCQQQCAPQCTLPSAPVCQQCQTSCQQFAPVCQEQCAPQCQQ 352
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 25.8 bits (54), Expect = 5.2
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -1
Query: 136 PGCPCRSHRQF*RPSFPARSECGGRCPRA*PVCQR 32
P C + Q +PS P +C C + PVCQ+
Sbjct: 241 PQCVQQCAPQCQQPSAPQCQQCQNTCQQYAPVCQQ 275
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 25.8 bits (54), Expect = 5.2
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -1
Query: 136 PGCPCRSHRQF*RPSFPARSECGGRCPRA*PVCQR 32
P C + Q +PS P +C C + PVCQ+
Sbjct: 242 PQCVQQCAPQCQQPSAPQCQQCQNTCQQYAPVCQQ 276
>AF016427-8|AAB65355.1| 513|Caenorhabditis elegans Hypothetical
protein F32D1.9 protein.
Length = 513
Score = 25.8 bits (54), Expect = 5.2
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 65 SMPPGMTSLPAASMVRVPPGM 3
SMPP M + P S+ PPG+
Sbjct: 266 SMPPPMGTAPPTSVADAPPGV 286
>AF000196-8|AAL11096.1| 624|Caenorhabditis elegans Hypothetical
protein B0041.2b protein.
Length = 624
Score = 25.8 bits (54), Expect = 5.2
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +3
Query: 12 RHTDHRCRWQTGHARGHRPPHSLRAGNDGR*NCR*LLQGHPG 137
R H R Q GH H PP+ R N + R +QG G
Sbjct: 47 RMMPHGFRPQQGHHPSHMPPYGQRGNNQNQYGNR--MQGGQG 86
>Z73971-12|CAC42267.1| 718|Caenorhabditis elegans Hypothetical
protein T11A5.6 protein.
Length = 718
Score = 25.0 bits (52), Expect = 9.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 150 SGDRSPGALVEVIGSFSAHHFQLE 79
SGDR G L+E+ S +HF ++
Sbjct: 502 SGDRRIGELIEMSSRISDNHFTID 525
>Z72515-6|CAA96686.2| 718|Caenorhabditis elegans Hypothetical
protein T11A5.6 protein.
Length = 718
Score = 25.0 bits (52), Expect = 9.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 150 SGDRSPGALVEVIGSFSAHHFQLE 79
SGDR G L+E+ S +HF ++
Sbjct: 502 SGDRRIGELIEMSSRISDNHFTID 525
>Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical protein
ZK1067.2 protein.
Length = 2219
Score = 25.0 bits (52), Expect = 9.1
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = -1
Query: 73 CGGRCPRA*PVCQRHRWSVCL 11
CG +CP+ C+R+++ C+
Sbjct: 1886 CGEQCPKICGTCERNKYIECV 1906
>U80844-4|AAB37974.1| 192|Caenorhabditis elegans Hypothetical
protein C07D8.2 protein.
Length = 192
Score = 25.0 bits (52), Expect = 9.1
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +2
Query: 23 PSMPLANWSCPGASTPTLTSSWK*WALKLPMTSTRAPGLRSPEGQQ 160
P P A S A+ PTLT++ + PM+S A L GQQ
Sbjct: 29 PMAPAAPTS--SAAAPTLTAAAPPSSASAPMSSAAAYHLHGQHGQQ 72
>AF040648-7|AAK26140.1| 386|Caenorhabditis elegans Lethal protein
805, isoform c protein.
Length = 386
Score = 25.0 bits (52), Expect = 9.1
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 53 PGASTPTLTSSWK*WALKLPM 115
P AS P +TSSW W L LP+
Sbjct: 5 PDAS-PYITSSWPWWWLLLPL 24
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,621,642
Number of Sequences: 27780
Number of extensions: 155920
Number of successful extensions: 309
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 305
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 280685548
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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