Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0879
(292 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 22 1.3
DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 22 1.8
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 1.8
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 21 2.3
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 21 4.1
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 21 4.1
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 4.1
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 4.1
DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 vari... 20 5.4
DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 vari... 20 5.4
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 20 5.4
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 19 9.4
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 19 9.4
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 19 9.4
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 19 9.4
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 19 9.4
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 19 9.4
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 19 9.4
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 19 9.4
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 19 9.4
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 19 9.4
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 19 9.4
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 19 9.4
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 19 9.4
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 19 9.4
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 22.2 bits (45), Expect = 1.3
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = -2
Query: 132 GALVEVIGSFSAHHFQLEVSVGVDAPGHDQFAS 34
G + + IG+F E +D PGH F S
Sbjct: 176 GGITQCIGAFDVTLESGERVTFLDTPGHAAFIS 208
>DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein.
Length = 120
Score = 21.8 bits (44), Expect = 1.8
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -2
Query: 156 CPSGDRSPGALVEV 115
CP G ++PG L V
Sbjct: 91 CPKGTKNPGTLATV 104
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.8 bits (44), Expect = 1.8
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -2
Query: 177 NEVNYGCCP 151
NE+ Y CCP
Sbjct: 207 NEIYYNCCP 215
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 21.4 bits (43), Expect = 2.3
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +3
Query: 195 VASRGLXXLXGKSRIIRCAALRSPR 269
+A G L G S + CA + PR
Sbjct: 181 IAGSGAVHLVGGSSALACAIMLGPR 205
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 20.6 bits (41), Expect = 4.1
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +3
Query: 6 SWRHTDHRCRWQTG 47
SW + HRCR G
Sbjct: 175 SWPYDTHRCRINFG 188
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 20.6 bits (41), Expect = 4.1
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +1
Query: 7 PGGTRTIDAAGKLVMPGGID 66
P G ID A K + PG D
Sbjct: 656 PDGRTEIDVAIKTLKPGSAD 675
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 20.6 bits (41), Expect = 4.1
Identities = 11/37 (29%), Positives = 14/37 (37%)
Frame = +2
Query: 2 SFLEAHGPSMPLANWSCPGASTPTLTSSWK*WALKLP 112
SF+E P + C A PT +W LP
Sbjct: 427 SFIEQTLQPGPAVSLKCSAAGNPTPQVTWALDGFALP 463
Score = 19.4 bits (38), Expect = 9.4
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = +2
Query: 23 PSMPLANWSCPGASTPTLTSSWK 91
PS+P + C ++ +L SW+
Sbjct: 1111 PSIPPEDVRCAALTSQSLQVSWQ 1133
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 20.6 bits (41), Expect = 4.1
Identities = 11/37 (29%), Positives = 14/37 (37%)
Frame = +2
Query: 2 SFLEAHGPSMPLANWSCPGASTPTLTSSWK*WALKLP 112
SF+E P + C A PT +W LP
Sbjct: 427 SFIEQTLQPGPAVSLKCSAAGNPTPQVTWALDGFALP 463
Score = 19.4 bits (38), Expect = 9.4
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = +2
Query: 23 PSMPLANWSCPGASTPTLTSSWK 91
PS+P + C ++ +L SW+
Sbjct: 1107 PSIPPEDVRCAALTSQSLQVSWQ 1129
>DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6
variant 2 precursor protein.
Length = 94
Score = 20.2 bits (40), Expect = 5.4
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -1
Query: 97 PSFPARSECGGRCPRA*P 44
PS S C GRC R P
Sbjct: 38 PSNEIFSRCDGRCQRFCP 55
>DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6
variant 1 precursor protein.
Length = 92
Score = 20.2 bits (40), Expect = 5.4
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -1
Query: 97 PSFPARSECGGRCPRA*P 44
PS S C GRC R P
Sbjct: 38 PSNEIFSRCDGRCQRFCP 55
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 20.2 bits (40), Expect = 5.4
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -2
Query: 285 PPGXSYVETVAQHTLLYGFFPP 220
PP V+ + QHTL + PP
Sbjct: 979 PPTSIRVDDLDQHTLKVTWKPP 1000
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 19.4 bits (38), Expect = 9.4
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -2
Query: 66 VDAPGHDQF 40
+DAPGH F
Sbjct: 90 IDAPGHRDF 98
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 19.4 bits (38), Expect = 9.4
Identities = 5/9 (55%), Positives = 6/9 (66%)
Frame = -2
Query: 177 NEVNYGCCP 151
N + Y CCP
Sbjct: 170 NTITYQCCP 178
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 19.4 bits (38), Expect = 9.4
Identities = 5/9 (55%), Positives = 6/9 (66%)
Frame = -2
Query: 177 NEVNYGCCP 151
N + Y CCP
Sbjct: 170 NTITYQCCP 178
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 19.4 bits (38), Expect = 9.4
Identities = 5/9 (55%), Positives = 6/9 (66%)
Frame = -2
Query: 177 NEVNYGCCP 151
N + Y CCP
Sbjct: 170 NTITYQCCP 178
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 19.4 bits (38), Expect = 9.4
Identities = 5/9 (55%), Positives = 6/9 (66%)
Frame = -2
Query: 177 NEVNYGCCP 151
N + Y CCP
Sbjct: 170 NTITYQCCP 178
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 19.4 bits (38), Expect = 9.4
Identities = 5/9 (55%), Positives = 6/9 (66%)
Frame = -2
Query: 177 NEVNYGCCP 151
N + Y CCP
Sbjct: 170 NTITYQCCP 178
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 19.4 bits (38), Expect = 9.4
Identities = 5/9 (55%), Positives = 6/9 (66%)
Frame = -2
Query: 177 NEVNYGCCP 151
N + Y CCP
Sbjct: 170 NTITYQCCP 178
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 19.4 bits (38), Expect = 9.4
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -2
Query: 66 VDAPGHDQF 40
+DAPGH F
Sbjct: 17 IDAPGHRDF 25
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 19.4 bits (38), Expect = 9.4
Identities = 5/9 (55%), Positives = 6/9 (66%)
Frame = -2
Query: 177 NEVNYGCCP 151
N + Y CCP
Sbjct: 238 NTITYQCCP 246
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 19.4 bits (38), Expect = 9.4
Identities = 5/9 (55%), Positives = 6/9 (66%)
Frame = -2
Query: 177 NEVNYGCCP 151
N + Y CCP
Sbjct: 238 NTITYQCCP 246
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 19.4 bits (38), Expect = 9.4
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 190 GQSLLEAYXNW 222
G LLE Y NW
Sbjct: 101 GGPLLEPYPNW 111
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 19.4 bits (38), Expect = 9.4
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -2
Query: 66 VDAPGHDQF 40
+DAPGH F
Sbjct: 33 IDAPGHRDF 41
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 19.4 bits (38), Expect = 9.4
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +2
Query: 68 PTLTSSWK*WALK 106
PT WK W LK
Sbjct: 259 PTYLIKWKNWDLK 271
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 19.4 bits (38), Expect = 9.4
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -2
Query: 66 VDAPGHDQF 40
+DAPGH F
Sbjct: 90 IDAPGHRDF 98
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,930
Number of Sequences: 438
Number of extensions: 1601
Number of successful extensions: 27
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used: 5869407
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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