Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0878
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    23   2.3  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    22   5.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.1  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    21   9.4  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   9.4  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   9.4  

>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 551 KQAPYSYPSSGIDGVP 598
           K APY  P  G+ G+P
Sbjct: 35  KSAPYPVPGLGLHGLP 50


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 619 PSGLDLNTIAPSFKKTDC 672
           P G+DL  + P   +T+C
Sbjct: 55  PQGVDLKRVLPEALQTNC 72


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +2

Query: 47  IHLIYFC*TNEVTLLFSCCLFY 112
           +HL+++C     T+ F  C +Y
Sbjct: 81  VHLLFYCPFIIFTVHFLLCTYY 102


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +1

Query: 610 RSWPSGLDLNTIAPSFKKTDC 672
           R  P GL+L    P   +TDC
Sbjct: 57  RCSPDGLELKKNMPDAIETDC 77


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 565 IRCLFPFFNLW 533
           +R LF FF LW
Sbjct: 271 VRALFLFFQLW 281


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 565 IRCLFPFFNLW 533
           +R LF FF LW
Sbjct: 267 VRALFLFFQLW 277


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,942
Number of Sequences: 336
Number of extensions: 4258
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)