Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0877
         (628 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8S807 Cluster: Putative uncharacterized protein OSJNBa...    35   1.4  
UniRef50_A0VEF5 Cluster: Putative uncharacterized protein; n=1; ...    33   5.6  
UniRef50_A4YKH5 Cluster: Putative uncharacterized protein; n=1; ...    33   7.4  
UniRef50_Q64VM4 Cluster: Putative xylose repressor; n=4; Bactero...    32   9.8  
UniRef50_Q6IL55 Cluster: HDC10337; n=1; Drosophila melanogaster|...    32   9.8  

>UniRef50_Q8S807 Cluster: Putative uncharacterized protein
           OSJNBa0020E23.17; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           OSJNBa0020E23.17 - Oryza sativa subsp. japonica (Rice)
          Length = 450

 Score = 35.1 bits (77), Expect = 1.4
 Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
 Frame = -3

Query: 341 WVPILQSSTKLSRQLLIVSTCEHGRRFHFENNVRSISLQLRFRINAMNINFSLVVEESDF 162
           + PIL+ +  +    + VS      RF F+ N     LQ    I  +  N+    + S F
Sbjct: 245 FTPILKDTASVVTASVSVSVTMSSFRFRFDANDLGQYLQSLSGITNLEFNY----QGSKF 300

Query: 161 ELFYIKRSNP*L-FFTIYIFFEAVSLRVEKYFYWQPHYLNII 39
            L  +    P +  F+ YI      L +E +  W P +LN++
Sbjct: 301 LLHDLHGKYPSIAIFSDYIHLNLSKLTIENHLQWCPEFLNVV 342


>UniRef50_A0VEF5 Cluster: Putative uncharacterized protein; n=1;
           Delftia acidovorans SPH-1|Rep: Putative uncharacterized
           protein - Delftia acidovorans SPH-1
          Length = 155

 Score = 33.1 bits (72), Expect = 5.6
 Identities = 25/98 (25%), Positives = 44/98 (44%)
 Frame = -3

Query: 443 YQDIYSPSFIKQQVYGSTRNCASTFS*WEP*RLLWVPILQSSTKLSRQLLIVSTCEHGRR 264
           Y D+      +  + GS   C   F  W      +V IL++S +  RQ++  + C+H   
Sbjct: 50  YSDVNDDVCYRLDINGSI-GCYEIFISWVG---NYVAILENSDESGRQVISRAGCDHLLN 105

Query: 263 FHFENNVRSISLQLRFRINAMNINFSLVVEESDFELFY 150
              E  V +  + L   +  MN++F+L+  + DF   Y
Sbjct: 106 QIIEKIVSAGFVILEKSVLLMNMDFTLINSDDDFSPVY 143


>UniRef50_A4YKH5 Cluster: Putative uncharacterized protein; n=1;
           Bradyrhizobium sp. ORS278|Rep: Putative uncharacterized
           protein - Bradyrhizobium sp. (strain ORS278)
          Length = 443

 Score = 32.7 bits (71), Expect = 7.4
 Identities = 13/47 (27%), Positives = 27/47 (57%)
 Frame = -2

Query: 531 RTSVLSSYCLSRFIV*PNSPANAFRSVLILPGYLQPFIYKATSLWFN 391
           RT + ++ C S  ++   +P   F  VL++PGY++P +   + L+ +
Sbjct: 242 RTWLAAAVCCSALVLLAPNPIQYFSLVLVMPGYIRPVMPNLSGLYID 288


>UniRef50_Q64VM4 Cluster: Putative xylose repressor; n=4;
           Bacteroidales|Rep: Putative xylose repressor -
           Bacteroides fragilis
          Length = 402

 Score = 32.3 bits (70), Expect = 9.8
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +2

Query: 440 GKINTDRNAFAGEFGHTMNLDRQ 508
           GKI T ++ F+GEFGHT   D +
Sbjct: 230 GKIYTGKSGFSGEFGHTSTFDNE 252


>UniRef50_Q6IL55 Cluster: HDC10337; n=1; Drosophila
           melanogaster|Rep: HDC10337 - Drosophila melanogaster
           (Fruit fly)
          Length = 829

 Score = 32.3 bits (70), Expect = 9.8
 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = -3

Query: 152 YIK-RSNP*LFFTIYIFFEAVSLRVEKYFYWQPHYLNIICSSDFYYSNTDT 3
           YI+ R N  +   + +F E + L     FYWQ HY N   S+DF++ +T T
Sbjct: 194 YIQMRLNDFILAALLVFHEFL-LMYALTFYWQIHY-NYFTSADFFWMSTST 242


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 583,425,733
Number of Sequences: 1657284
Number of extensions: 11225425
Number of successful extensions: 23816
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23804
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46051731393
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)