Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0875
         (645 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY684169-1|AAT74627.1| 3052|Homo sapiens REV3-like, catalytic su...    31   4.6  
AY225517-1|AAO74854.1|  124|Homo sapiens acetylcholinesterase me...    31   4.6  
AY225516-1|AAO74853.1|  153|Homo sapiens acetylcholinesterase me...    31   4.6  
AL512325-1|CAI20998.1| 3130|Homo sapiens REV3-like, catalytic su...    31   4.6  
AL136310-2|CAI20509.1| 3130|Homo sapiens REV3-like, catalytic su...    31   4.6  
AL080317-2|CAI19192.1| 3130|Homo sapiens REV3-like, catalytic su...    31   4.6  
AF179429-1|AAG09403.1| 3052|Homo sapiens DNA polymerase zeta cat...    31   4.6  
AF179428-1|AAG09402.1| 3052|Homo sapiens DNA polymerase zeta cat...    31   4.6  
AF157476-1|AAD40184.1| 3130|Homo sapiens DNA polymerase zeta cat...    31   4.6  
AF078695-1|AAC28460.1| 3052|Homo sapiens DNA polymerase zeta cat...    31   4.6  
AF071798-1|AAC24009.1| 3130|Homo sapiens DNA polymerase zeta cat...    31   4.6  
AF058701-1|AAC24357.1| 3130|Homo sapiens DNA polymerase zeta cat...    31   4.6  
AF035537-1|AAB88486.1| 3052|Homo sapiens DNA polymerase zeta pro...    31   4.6  

>AY684169-1|AAT74627.1| 3052|Homo sapiens REV3-like, catalytic
           subunit of DNA polymerase zeta (yeast) protein.
          Length = 3052

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 18/57 (31%), Positives = 30/57 (52%)
 Frame = +1

Query: 64  PACAFTHNIKMLAKMAPSQDKLVHLHKTPTSLDINPSGLLFAFVELNHYNNECESEG 234
           P+  +T NI+ + K +P     +H+H+ P    +  +   F F +LNH  N+  SEG
Sbjct: 596 PSRKYT-NIRKIEKDSP----FIHMHRHPNENTLGKNS--FNFSDLNHSKNKVSSEG 645


>AY225517-1|AAO74854.1|  124|Homo sapiens acetylcholinesterase
           membrane anchor precursor PRiMA variant II protein.
          Length = 124

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = +2

Query: 218 SASQKESWAAAIVCSLTMSAVCCSKLRISSMMIVICLKTFR 340
           S   +ESW + +V  +   AVCC+ L   +++++IC K  +
Sbjct: 82  SCPTEESWWSGLVIII---AVCCASLVFLTVLVIICYKAIK 119


>AY225516-1|AAO74853.1|  153|Homo sapiens acetylcholinesterase
           membrane anchor precursor PRiMA variant I protein.
          Length = 153

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = +2

Query: 218 SASQKESWAAAIVCSLTMSAVCCSKLRISSMMIVICLKTFR 340
           S   +ESW + +V  +   AVCC+ L   +++++IC K  +
Sbjct: 82  SCPTEESWWSGLVIII---AVCCASLVFLTVLVIICYKAIK 119


>AL512325-1|CAI20998.1| 3130|Homo sapiens REV3-like, catalytic
           subunit of DNA polymerase zeta (yeast) protein.
          Length = 3130

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 18/57 (31%), Positives = 30/57 (52%)
 Frame = +1

Query: 64  PACAFTHNIKMLAKMAPSQDKLVHLHKTPTSLDINPSGLLFAFVELNHYNNECESEG 234
           P+  +T NI+ + K +P     +H+H+ P    +  +   F F +LNH  N+  SEG
Sbjct: 674 PSRKYT-NIRKIEKDSP----FIHMHRHPNENTLGKNS--FNFSDLNHSKNKVSSEG 723


>AL136310-2|CAI20509.1| 3130|Homo sapiens REV3-like, catalytic
           subunit of DNA polymerase zeta (yeast) protein.
          Length = 3130

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 18/57 (31%), Positives = 30/57 (52%)
 Frame = +1

Query: 64  PACAFTHNIKMLAKMAPSQDKLVHLHKTPTSLDINPSGLLFAFVELNHYNNECESEG 234
           P+  +T NI+ + K +P     +H+H+ P    +  +   F F +LNH  N+  SEG
Sbjct: 674 PSRKYT-NIRKIEKDSP----FIHMHRHPNENTLGKNS--FNFSDLNHSKNKVSSEG 723


>AL080317-2|CAI19192.1| 3130|Homo sapiens REV3-like, catalytic
           subunit of DNA polymerase zeta (yeast) protein.
          Length = 3130

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 18/57 (31%), Positives = 30/57 (52%)
 Frame = +1

Query: 64  PACAFTHNIKMLAKMAPSQDKLVHLHKTPTSLDINPSGLLFAFVELNHYNNECESEG 234
           P+  +T NI+ + K +P     +H+H+ P    +  +   F F +LNH  N+  SEG
Sbjct: 674 PSRKYT-NIRKIEKDSP----FIHMHRHPNENTLGKNS--FNFSDLNHSKNKVSSEG 723


>AF179429-1|AAG09403.1| 3052|Homo sapiens DNA polymerase zeta
           catalytic subunit variant 2 protein.
          Length = 3052

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 18/57 (31%), Positives = 30/57 (52%)
 Frame = +1

Query: 64  PACAFTHNIKMLAKMAPSQDKLVHLHKTPTSLDINPSGLLFAFVELNHYNNECESEG 234
           P+  +T NI+ + K +P     +H+H+ P    +  +   F F +LNH  N+  SEG
Sbjct: 596 PSRKYT-NIRKIEKDSP----FIHMHRHPNENTLGKNS--FNFSDLNHSKNKVSSEG 645


>AF179428-1|AAG09402.1| 3052|Homo sapiens DNA polymerase zeta
           catalytic subunit variant 1 protein.
          Length = 3052

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 18/57 (31%), Positives = 30/57 (52%)
 Frame = +1

Query: 64  PACAFTHNIKMLAKMAPSQDKLVHLHKTPTSLDINPSGLLFAFVELNHYNNECESEG 234
           P+  +T NI+ + K +P     +H+H+ P    +  +   F F +LNH  N+  SEG
Sbjct: 596 PSRKYT-NIRKIEKDSP----FIHMHRHPNENTLGKNS--FNFSDLNHSKNKVSSEG 645


>AF157476-1|AAD40184.1| 3130|Homo sapiens DNA polymerase zeta
           catalytic subunit protein.
          Length = 3130

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 18/57 (31%), Positives = 30/57 (52%)
 Frame = +1

Query: 64  PACAFTHNIKMLAKMAPSQDKLVHLHKTPTSLDINPSGLLFAFVELNHYNNECESEG 234
           P+  +T NI+ + K +P     +H+H+ P    +  +   F F +LNH  N+  SEG
Sbjct: 674 PSRKYT-NIRKIEKDSP----FIHMHRHPNENTLGKNS--FNFSDLNHSKNKVSSEG 723


>AF078695-1|AAC28460.1| 3052|Homo sapiens DNA polymerase zeta
           catalytic subunit protein.
          Length = 3052

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 18/57 (31%), Positives = 30/57 (52%)
 Frame = +1

Query: 64  PACAFTHNIKMLAKMAPSQDKLVHLHKTPTSLDINPSGLLFAFVELNHYNNECESEG 234
           P+  +T NI+ + K +P     +H+H+ P    +  +   F F +LNH  N+  SEG
Sbjct: 596 PSRKYT-NIRKIEKDSP----FIHMHRHPNENTLGKNS--FNFSDLNHSKNKVSSEG 645


>AF071798-1|AAC24009.1| 3130|Homo sapiens DNA polymerase zeta
           catalytic subunit protein.
          Length = 3130

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 18/57 (31%), Positives = 30/57 (52%)
 Frame = +1

Query: 64  PACAFTHNIKMLAKMAPSQDKLVHLHKTPTSLDINPSGLLFAFVELNHYNNECESEG 234
           P+  +T NI+ + K +P     +H+H+ P    +  +   F F +LNH  N+  SEG
Sbjct: 674 PSRKYT-NIRKIEKDSP----FIHMHRHPNENTLGKNS--FNFSDLNHSKNKVSSEG 723


>AF058701-1|AAC24357.1| 3130|Homo sapiens DNA polymerase zeta
           catalytic subunit protein.
          Length = 3130

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 18/57 (31%), Positives = 30/57 (52%)
 Frame = +1

Query: 64  PACAFTHNIKMLAKMAPSQDKLVHLHKTPTSLDINPSGLLFAFVELNHYNNECESEG 234
           P+  +T NI+ + K +P     +H+H+ P    +  +   F F +LNH  N+  SEG
Sbjct: 674 PSRKYT-NIRKIEKDSP----FIHMHRHPNENTLGKNS--FNFSDLNHSKNKVSSEG 723


>AF035537-1|AAB88486.1| 3052|Homo sapiens DNA polymerase zeta
           protein.
          Length = 3052

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 18/57 (31%), Positives = 30/57 (52%)
 Frame = +1

Query: 64  PACAFTHNIKMLAKMAPSQDKLVHLHKTPTSLDINPSGLLFAFVELNHYNNECESEG 234
           P+  +T NI+ + K +P     +H+H+ P    +  +   F F +LNH  N+  SEG
Sbjct: 596 PSRKYT-NIRKIEKDSP----FIHMHRHPNENTLGKNS--FNFSDLNHSKNKVSSEG 645


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,540,285
Number of Sequences: 237096
Number of extensions: 1730280
Number of successful extensions: 3344
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3343
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)