Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0875
         (645 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY423544-1|AAR24293.1|  247|Drosophila melanogaster sinuous prot...    28   9.4  
AY069562-1|AAL39707.1|  243|Drosophila melanogaster LD29359p pro...    28   9.4  
AE014296-3030|AAF49254.2|  535|Drosophila melanogaster CG18233-P...    28   9.4  
AE014296-965|AAF50772.3|  247|Drosophila melanogaster CG10624-PA...    28   9.4  

>AY423544-1|AAR24293.1|  247|Drosophila melanogaster sinuous
           protein.
          Length = 247

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
 Frame = -2

Query: 620 AVLQWAASHKRLEARTXCR-GLWVHAFRNFRNVFEDRRGSTF 498
           A   W  S  R+      R GLWVH FR+  +V +D +   F
Sbjct: 55  ATPSWLVSDYRITGAKLDRLGLWVHCFRSLPDVNDDSQRRFF 96


>AY069562-1|AAL39707.1|  243|Drosophila melanogaster LD29359p
           protein.
          Length = 243

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
 Frame = -2

Query: 620 AVLQWAASHKRLEARTXCR-GLWVHAFRNFRNVFEDRRGSTF 498
           A   W  S  R+      R GLWVH FR+  +V +D +   F
Sbjct: 55  ATPSWLVSDYRITGAKLDRLGLWVHCFRSLPDVNDDSQRRFF 96


>AE014296-3030|AAF49254.2|  535|Drosophila melanogaster CG18233-PA
           protein.
          Length = 535

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +1

Query: 472 NIFSNWLEEKVDPLRSSKTFLKFLNAWTHNPRQ 570
           +I++N L+EKVD L      LK  N  THN R+
Sbjct: 53  SIYANILQEKVDNLNIFLDALKRPNHKTHNERE 85


>AE014296-965|AAF50772.3|  247|Drosophila melanogaster CG10624-PA
           protein.
          Length = 247

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
 Frame = -2

Query: 620 AVLQWAASHKRLEARTXCR-GLWVHAFRNFRNVFEDRRGSTF 498
           A   W  S  R+      R GLWVH FR+  +V +D +   F
Sbjct: 55  ATPSWLVSDYRITGAKLDRLGLWVHCFRSLPDVNDDSQRRFF 96


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,421,425
Number of Sequences: 53049
Number of extensions: 555313
Number of successful extensions: 1544
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1544
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)