Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0874
         (628 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    24   1.2  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    23   2.1  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    23   2.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.8  

>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 8/23 (34%), Positives = 18/23 (78%)
 Frame = +1

Query: 88  ADLSMSAMLPDSTQDSPKSTESN 156
           +  S+S++LP++  ++PKS E++
Sbjct: 21  SSFSISSILPETALEAPKSPENH 43


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/17 (47%), Positives = 15/17 (88%)
 Frame = -2

Query: 207 ISCNMVLQKVKTILVIS 157
           +SC+ VL++VKT L+++
Sbjct: 269 LSCDAVLEEVKTTLLLA 285


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +2

Query: 449 FWYVPWGLNARK 484
           FWYVP  L  RK
Sbjct: 461 FWYVPKSLRGRK 472


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +1

Query: 442 LFFLVCALGPQCEKIVI*VHWEFHSSLFSYSHVNLIIFKMPTL 570
           LFFL+C     C  I+  VH  F   ++ +     IIF M  L
Sbjct: 140 LFFLLCIYYFYCAFIIFTVHLLFLLCIYHF-FCAFIIFTMHLL 181


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,807
Number of Sequences: 336
Number of extensions: 2941
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)