Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0874
         (628 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0293 + 21644415-21644533,21644686-21645118                       31   0.57 
08_01_0994 + 10071081-10072163,10072704-10074530,10074977-10075054     29   2.3  
02_04_0471 + 23192001-23192102,23192229-23192356,23192440-231931...    29   2.3  
11_03_0073 - 9621199-9621312,9621401-9621476,9621553-9621619,962...    29   4.0  
08_02_1105 + 24344656-24345513,24346774-24347149,24348089-24348204     28   5.3  
02_05_0977 - 33239887-33240566,33241010-33241985                       28   5.3  
02_05_1242 - 35197944-35198118,35198276-35198332,35198780-351988...    27   9.2  
02_02_0331 + 9017291-9019084,9019205-9019402,9020014-9020184,902...    27   9.2  

>02_04_0293 + 21644415-21644533,21644686-21645118
          Length = 183

 Score = 31.5 bits (68), Expect = 0.57
 Identities = 20/43 (46%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +1

Query: 49  GCDGGGEPSVETAA-DLSMSAMLPDSTQDSPKSTESNRND*NG 174
           G  GGG P+  TAA    MSA L  ST DS K  +S+R    G
Sbjct: 66  GGGGGGSPATATAAAKRRMSAALETSTGDSNKVDKSSRRGGGG 108


>08_01_0994 + 10071081-10072163,10072704-10074530,10074977-10075054
          Length = 995

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = -2

Query: 399 LQWTWCSIQRI*PNNEAIITTSRYLLRYKKFFLSSV 292
           L  +WCSI +I P N A +T  +YL     F LS +
Sbjct: 545 LNLSWCSILQILPENIASLTELQYLNLSNCFLLSQL 580


>02_04_0471 +
           23192001-23192102,23192229-23192356,23192440-23193108,
           23193900-23194086
          Length = 361

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -3

Query: 119 SGSIADIERSAAVSTLGSPPPSQP*ATDRACR 24
           S ++A +ER  A +  GSPPP  P  T + CR
Sbjct: 208 SDAMAALERVFARAAHGSPPPLPPPRTGQCCR 239


>11_03_0073 -
           9621199-9621312,9621401-9621476,9621553-9621619,
           9621655-9621751,9621898-9621996,9622348-9622358,
           9622716-9622784,9622871-9623195,9623287-9623457,
           9623538-9623713,9624173-9624414,9624481-9624542,
           9625305-9625340,9626103-9626262,9626372-9626606,
           9626694-9626949,9627062-9627176,9628388-9628450,
           9628592-9629325
          Length = 1035

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = -2

Query: 495 LNDYFLAL-RPQGTYQKKQELLGTKYHI*RDYRLQWTWCSIQRI*PNNEAIITTS 334
           L DY +AL R +  Y + ++LL  K H+     L+  W S+    PN + ++  +
Sbjct: 144 LPDYVVALLREKIPYAQLRKLLLLKAHVFTGEELKGNWHSVHEAIPNRDHVVAVA 198


>08_02_1105 + 24344656-24345513,24346774-24347149,24348089-24348204
          Length = 449

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +1

Query: 460 ALGPQCEKIVI*VHWEFHSSLFSYSHVNLI 549
           A  PQC    I  HW +H  +F+  H + I
Sbjct: 347 ATRPQCSVAQIHEHWPYHEPMFTCGHASNI 376


>02_05_0977 - 33239887-33240566,33241010-33241985
          Length = 551

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -2

Query: 108 SGHRKVGSGFHTRFTAAVAALG 43
           SGHR V  G+ T  +A VAA+G
Sbjct: 308 SGHRSVAGGYTTYASATVAAMG 329


>02_05_1242 -
           35197944-35198118,35198276-35198332,35198780-35198853,
           35198954-35199028,35199295-35199349,35199574-35199647,
           35200446-35200579,35200660-35200746,35200838-35200967
          Length = 286

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = -3

Query: 149 SVDLGESCVESGSIADIERSAAVSTLGSPPPSQP 48
           S+ L  S      +AD E    V+ L  PPPS P
Sbjct: 220 SLQLHISAERCAEVADDEEEEMVAVLSQPPPSPP 253


>02_02_0331 +
           9017291-9019084,9019205-9019402,9020014-9020184,
           9020292-9020435,9020552-9020764,9020859-9021929,
           9022365-9022391
          Length = 1205

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = +1

Query: 40  VA*GCDGGGEPSVETAADLSMSAMLPDSTQDSPKSTESN 156
           VA  CD  GEPS++   D   +A+L  ST+   +  ESN
Sbjct: 724 VATQCDCQGEPSMDVMGD---AALLGHSTEQKQQIEESN 759


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,447,154
Number of Sequences: 37544
Number of extensions: 284704
Number of successful extensions: 604
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 604
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1525730988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)