Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0874
         (628 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   3.2  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               22   5.6  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   7.4  
AY078399-1|AAL83702.1|   31|Apis mellifera major royal jelly pro...    21   9.8  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   9.8  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 498 DLNDYFLALRPQGTYQKKQELLG 430
           DL + F   RP+    KKQ++LG
Sbjct: 15  DLENEFNINRPRRKLSKKQQMLG 37


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +2

Query: 143 PQSLIEMTKMVFTFCKTI 196
           P+S+ + TK +F  CK+I
Sbjct: 85  PRSMQDSTKKLFNKCKSI 102


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = -1

Query: 346 NYYFPLLIEVQEVFLIICS 290
           ++Y PL + +Q  + I C+
Sbjct: 210 SFYIPLFVMIQVYYKIFCA 228


>AY078399-1|AAL83702.1|   31|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 31

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +3

Query: 426 WYLRVLVFSGMCLGASMRENS 488
           W   V      C GA +RENS
Sbjct: 4   WLFMVACLGIACQGAIVRENS 24


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +3

Query: 426 WYLRVLVFSGMCLGASMRENS 488
           W   V      C GA +RENS
Sbjct: 4   WLFMVACLGIACQGAIVRENS 24


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,999
Number of Sequences: 438
Number of extensions: 3358
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)