Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0873
(628 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 79 2e-15
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 9e-11
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 62 5e-10
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 60 2e-09
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 55 5e-08
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 54 9e-08
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 54 9e-08
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 54 9e-08
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 52 3e-07
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21) 44 8e-05
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 37 0.012
SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) 37 0.015
SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19) 36 0.036
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 34 0.11
SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058) 33 0.19
SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05) 33 0.25
SB_48838| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-12) 31 1.0
SB_51987| Best HMM Match : Peptidase_C1 (HMM E-Value=6.4) 30 1.3
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 30 1.3
SB_1718| Best HMM Match : I-set (HMM E-Value=3.8e-07) 30 1.8
SB_40832| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_3185| Best HMM Match : Sec63 (HMM E-Value=0) 29 3.1
SB_56411| Best HMM Match : MoCF_biosynth (HMM E-Value=4.8) 29 4.1
SB_10836| Best HMM Match : Fork_head (HMM E-Value=0) 29 4.1
SB_54416| Best HMM Match : rve (HMM E-Value=1.4e-27) 28 5.4
SB_53506| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_6887| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 79.4 bits (187), Expect = 2e-15
Identities = 36/83 (43%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 FPYNGENKRQAIVEFMRDPVAQPKQKKKDVVDESWA-RDTDVVHLNGDSFDAILAKAEHA 179
+ Y+G++++ A+V+ M+DP A K+ + + W+ ++VVHL D FD +AK
Sbjct: 46 YKYSGKHEKDALVQCMKDPSAVAPVKEDE---KPWSDTPSEVVHLRDDMFDDFVAKNPSV 102
Query: 180 LVVFYAPWCGHCKRIKPEFEKAA 248
LV+FYAPWCGHCK +KPE+ AA
Sbjct: 103 LVMFYAPWCGHCKAMKPEYVDAA 125
Score = 62.9 bits (146), Expect = 2e-10
Identities = 24/52 (46%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Frame = +3
Query: 96 DESWAR-DTDVVHLNGDSFDAILAKAEHALVVFYAPWCGHCKRIKPEFEKAA 248
++ W+ ++V HL+ +F + + K +H LV+FYAPWCGHCK+ KPE AA
Sbjct: 187 EQEWSEIPSEVYHLSDTTFKSFVKKKKHVLVMFYAPWCGHCKKAKPELMSAA 238
Score = 44.4 bits (100), Expect = 8e-05
Identities = 20/32 (62%), Positives = 25/32 (78%)
Frame = +2
Query: 254 VKTEKINGILAAVDATKEPDLASRFGVKGYPT 349
+K ++I G+LAAVDATKE L RF V+GYPT
Sbjct: 128 LKEQEIPGVLAAVDATKEAALGKRFKVEGYPT 159
Score = 40.7 bits (91), Expect = 0.001
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +1
Query: 535 EKSKHSIVMFYAPWCGHLQK 594
+K KH +VMFYAPWCGH +K
Sbjct: 210 KKKKHVLVMFYAPWCGHCKK 229
Score = 37.5 bits (83), Expect = 0.009
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +3
Query: 3 FPYNGENKRQAIVEFMRDPVAQPKQKKKDVVDESWARD-TDVVHLNGDSFDAILAKAEHA 179
F Y + + ++FM DP P + W+ + ++V HL D+FD L +
Sbjct: 298 FKYTSGREAKDFIQFMDDPREGPPPPPPE---PQWSDEPSNVQHLTQDTFDEALKTFDSI 354
Query: 180 LVVFYAP 200
LV+FYAP
Sbjct: 355 LVMFYAP 361
Score = 37.1 bits (82), Expect = 0.012
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +3
Query: 180 LVVFYAPWCGHCKRIKPEFEKAATK 254
++V Y CG+CKR KPEF AAT+
Sbjct: 3 VIVLYIAGCGYCKRFKPEFAAAATE 27
Score = 36.3 bits (80), Expect = 0.020
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +2
Query: 284 AAVDATKEPDLASRFGVKGYPTLKYFNKGEFKFDAGHARQEDQIISFIKD 433
AAVD TKE + +FGV+GY + K +FK+ +G R+ I F+ D
Sbjct: 271 AAVDCTKEMAVCQQFGVEGYFN---YGKNDFKYTSG--REAKDFIQFMDD 315
Score = 32.7 bits (71), Expect = 0.25
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 538 KSKHSIVMFYAPWCGH 585
K+ +VMFYAPWCGH
Sbjct: 98 KNPSVLVMFYAPWCGH 113
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 64.1 bits (149), Expect = 9e-11
Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Frame = +3
Query: 54 DPVAQ--PKQKKKDVVDESWARDTDVVH-LNGDSFDAILAKAEHALVVFYAPWCGHCKRI 224
DP A+ +Q+K D D ++ D V LN +FD ++ + LV FYAPWCGHCK +
Sbjct: 37 DPGAENDDEQEKNDADDSDEVKEEDDVSVLNSKNFDRVIEENNIILVEFYAPWCGHCKSL 96
Query: 225 KPEFEKAATK*RL 263
PE+ KAA K +L
Sbjct: 97 APEYAKAAKKMKL 109
Score = 54.8 bits (126), Expect = 5e-08
Identities = 28/82 (34%), Positives = 43/82 (52%)
Frame = +3
Query: 3 FPYNGENKRQAIVEFMRDPVAQPKQKKKDVVDESWARDTDVVHLNGDSFDAILAKAEHAL 182
+ Y G + IVE+M+ + P K V + L ++F ++ + L
Sbjct: 148 YEYEGPREESGIVEYMKKQ-SDPNWKPPPVA---------ALTLTKENFTEVVNRESLML 197
Query: 183 VVFYAPWCGHCKRIKPEFEKAA 248
V F+APWCGHCK++ PE+EKAA
Sbjct: 198 VEFFAPWCGHCKQLAPEYEKAA 219
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/64 (39%), Positives = 35/64 (54%)
Frame = +2
Query: 239 KSGHKVKTEKINGILAAVDATKEPDLASRFGVKGYPTLKYFNKGEFKFDAGHARQEDQII 418
K+ K+K A +DAT D+A RF V GYPTLK F KG ++ R+E I+
Sbjct: 102 KAAKKMKLNDPPVPFAKMDATVASDIAQRFDVSGYPTLKIFRKGT-PYEYEGPREESGIV 160
Query: 419 SFIK 430
++K
Sbjct: 161 EYMK 164
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +2
Query: 281 LAAVDATKEPDLASRFGVKGYPTLKYFNKGE 373
LA VDAT E +LA ++ V+GYPTLK F KG+
Sbjct: 231 LAIVDATIESELAQKYEVQGYPTLKVFRKGK 261
Score = 31.1 bits (67), Expect = 0.77
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 138 GDSFDAILAKAEH-ALVVFYAPWCGHCKRIKPEFEK 242
G +FD I+ + L+ FYAPWCG ++P F+K
Sbjct: 532 GKTFDEIVNDPKKDVLIEFYAPWCGIA--LEPTFKK 565
Score = 29.9 bits (64), Expect = 1.8
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 535 EKSKHSIVMFYAPWCGH 585
E++ +V FYAPWCGH
Sbjct: 76 EENNIILVEFYAPWCGH 92
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +1
Query: 493 PCATSILDFQKHTPEKSKHSIVM--FYAPWCGHLQK 594
P A L + T ++ S+++ F+APWCGH ++
Sbjct: 175 PVAALTLTKENFTEVVNRESLMLVEFFAPWCGHCKQ 210
Score = 27.5 bits (58), Expect = 9.4
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +1
Query: 517 FQKHTPEKSKHSIVMFYAPWCG 582
F + + K ++ FYAPWCG
Sbjct: 535 FDEIVNDPKKDVLIEFYAPWCG 556
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 61.7 bits (143), Expect = 5e-10
Identities = 25/42 (59%), Positives = 29/42 (69%)
Frame = +3
Query: 123 VVHLNGDSFDAILAKAEHALVVFYAPWCGHCKRIKPEFEKAA 248
V L+G F L EH LV+FYAPWCGHCK KP++EKAA
Sbjct: 149 VKQLDGSDFWGYLNNTEHVLVMFYAPWCGHCKNAKPKYEKAA 190
Score = 56.4 bits (130), Expect = 2e-08
Identities = 22/49 (44%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Frame = +3
Query: 105 WARD-TDVVHLNGDSFDAILAKAEHALVVFYAPWCGHCKRIKPEFEKAA 248
W++D + VV L +S D + E+ LV+++APWCGHC +KP + KAA
Sbjct: 45 WSKDDSKVVFLTDESHDEFIKSHENVLVMYFAPWCGHCNEMKPNYYKAA 93
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/54 (35%), Positives = 32/54 (59%)
Frame = +2
Query: 272 NGILAAVDATKEPDLASRFGVKGYPTLKYFNKGEFKFDAGHARQEDQIISFIKD 433
N + A +D TK D+ + V GYPTL+Y+ G+F + R + +ISF+++
Sbjct: 198 NRVFAKLDCTKFGDVCDKEEVNGYPTLRYYLYGKFVVEYDGDRVTEDLISFMEE 251
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +2
Query: 239 KSGHKVKTEKINGILAAVDATKEPDLASRFGVKGYPTLKYFNKGEFKFDAGHARQEDQII 418
K+ + E N LAAVD TK D+A + + GYPT+K + K A A ++ ++
Sbjct: 91 KAAQVLHDEDANCNLAAVDCTKHKDVAKKVALAGYPTVKLY-KASNTAKAASAEEDSSLV 149
Score = 35.1 bits (77), Expect = 0.047
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +1
Query: 541 SKHSIVMFYAPWCGH 585
++H +VMFYAPWCGH
Sbjct: 164 TEHVLVMFYAPWCGH 178
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 269 INGILAAVDATKEPDLASRFGVKGYPT 349
+ G LAAVD T+ + ++ +KGYPT
Sbjct: 16 VKGALAAVDCTESKNTCNQRDIKGYPT 42
Score = 29.1 bits (62), Expect = 3.1
Identities = 8/11 (72%), Positives = 11/11 (100%)
Frame = +1
Query: 553 IVMFYAPWCGH 585
+VM++APWCGH
Sbjct: 71 LVMYFAPWCGH 81
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/50 (50%), Positives = 32/50 (64%)
Frame = +3
Query: 99 ESWARDTDVVHLNGDSFDAILAKAEHALVVFYAPWCGHCKRIKPEFEKAA 248
E + DV+ L +FD +A +H LV FYAPWCGHCK + PE+ KAA
Sbjct: 18 EEIKEEEDVLVLTEKNFDEAVAANKHVLVEFYAPWCGHCKALAPEYAKAA 67
Score = 48.4 bits (110), Expect = 5e-06
Identities = 26/63 (41%), Positives = 39/63 (61%)
Frame = +2
Query: 239 KSGHKVKTEKINGILAAVDATKEPDLASRFGVKGYPTLKYFNKGEFKFDAGHARQEDQII 418
K+ ++K+EK LA VDAT E L +F V+GYPT+K+F G+ AG R +I+
Sbjct: 65 KAAGQLKSEKSEIKLAKVDATAETKLGEKFQVQGYPTIKFFKDGKPSEYAG-GRTAPEIV 123
Query: 419 SFI 427
S++
Sbjct: 124 SWL 126
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +3
Query: 18 ENKRQAIVEFMRDPVAQPKQKKKDVVDESWARDTDVVHLNGDSFDAILA-KAEHALVVFY 194
EN ++ + F+ D +P ++ E W V L G +FD + K ++ V FY
Sbjct: 354 ENVKEFVQAFL-DKKLKPHLLSAEI-PEDWD-SKPVKVLCGKNFDEVARNKDKNVFVEFY 410
Query: 195 APWCGHCKRIKPEFEKAATK 254
APWCGHCK++ P +++ K
Sbjct: 411 APWCGHCKQLAPIWDQLGEK 430
Score = 33.9 bits (74), Expect = 0.11
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 541 SKHSIVMFYAPWCGH 585
+KH +V FYAPWCGH
Sbjct: 41 NKHVLVEFYAPWCGH 55
Score = 33.5 bits (73), Expect = 0.14
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 514 DFQKHTPEKSKHSIVMFYAPWCGHLQK 594
+F + K K+ V FYAPWCGH ++
Sbjct: 393 NFDEVARNKDKNVFVEFYAPWCGHCKQ 419
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 54.8 bits (126), Expect = 5e-08
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 9/84 (10%)
Frame = +3
Query: 36 IVEFMRDPVAQPKQKKKDVVDESWARDTD---------VVHLNGDSFDAILAKAEHALVV 188
+++ ++D Q K + KD DE+ ++D V++LN +F+ + K E+ LV
Sbjct: 16 LLDSLQDSTPQNKMQPKDTCDEA-SKDQGAAPDPASPAVLNLNDQNFNETIKKNEYVLVD 74
Query: 189 FYAPWCGHCKRIKPEFEKAATK*R 260
FYAPWC C+R+ P F+ AA + R
Sbjct: 75 FYAPWCSDCQRLSPLFDTAALQLR 98
Score = 45.2 bits (102), Expect = 4e-05
Identities = 16/42 (38%), Positives = 28/42 (66%)
Frame = +3
Query: 123 VVHLNGDSFDAILAKAEHALVVFYAPWCGHCKRIKPEFEKAA 248
++ L+ +F+ + K + LV FYAPWC HCK++ P+++ A
Sbjct: 136 LLELDDSNFEPAVQKHKFVLVDFYAPWCFHCKKMAPDYKDVA 177
Score = 31.9 bits (69), Expect = 0.44
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = +1
Query: 511 LDFQKHTPEKSKHSIVM--FYAPWCGHLQK 594
LD P KH V+ FYAPWC H +K
Sbjct: 139 LDDSNFEPAVQKHKFVLVDFYAPWCFHCKK 168
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 490 SPCATSILDFQ-KHTPEKSKHSIVMFYAPWCGHLQK 594
SP ++ D T +K+++ +V FYAPWC Q+
Sbjct: 50 SPAVLNLNDQNFNETIKKNEYVLVDFYAPWCSDCQR 85
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 54.0 bits (124), Expect = 9e-08
Identities = 20/40 (50%), Positives = 29/40 (72%)
Frame = +3
Query: 123 VVHLNGDSFDAILAKAEHALVVFYAPWCGHCKRIKPEFEK 242
V+ L D+FD ++ + ALV FYAPWCGHCK++ P +E+
Sbjct: 24 VIDLTKDNFDEVVNGEKFALVEFYAPWCGHCKQLAPTYEQ 63
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +2
Query: 260 TEKINGILAAVDATKEPDLASRFGVKGYPTLKYFNKGE-FKFDAGHARQEDQIISFIKD 433
T+ + I+A VDA + DL SRF VKG+PT+KYF KG + R + I FI++
Sbjct: 69 TQSSDVIIAKVDADGDRDLGSRFDVKGFPTIKYFPKGSTTPEEYNGGRDINDFIKFIEE 127
Score = 31.5 bits (68), Expect = 0.58
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 544 KHSIVMFYAPWCGHLQK 594
K ++V FYAPWCGH ++
Sbjct: 40 KFALVEFYAPWCGHCKQ 56
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 54.0 bits (124), Expect = 9e-08
Identities = 22/44 (50%), Positives = 31/44 (70%)
Frame = +3
Query: 117 TDVVHLNGDSFDAILAKAEHALVVFYAPWCGHCKRIKPEFEKAA 248
+DV+ L +F + +A + LV F+APWCGHCKR+ PE+E AA
Sbjct: 538 SDVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEYETAA 581
Score = 44.4 bits (100), Expect = 8e-05
Identities = 23/51 (45%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 281 LAAVDATKE-PDLASRFGVKGYPTLKYFNKGEFKFDAGHARQEDQIISFIK 430
LA VD T+ D S++GV GYPTLK F GE D R II ++K
Sbjct: 593 LAKVDCTEAGKDTCSKYGVSGYPTLKIFRNGEMSKDYDGPRDSSGIIRYMK 643
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 108 ARDTDVVHLNGDSFDAILAK-AEHALVVFYAPWCGHCKRIKPEFEKAATK 254
+ D V + G++F I+ + L+ FYAPWCGHCK ++P++ + K
Sbjct: 859 SNDGPVKVVVGENFKEIVNDPTKDVLIEFYAPWCGHCKSLEPKYNELGEK 908
Score = 31.9 bits (69), Expect = 0.44
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 514 DFQKHTPEKSKHSIVMFYAPWCGH 585
+F++ + +K ++ FYAPWCGH
Sbjct: 871 NFKEIVNDPTKDVLIEFYAPWCGH 894
Score = 28.3 bits (60), Expect = 5.4
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +1
Query: 553 IVMFYAPWCGHLQK 594
+V F+APWCGH ++
Sbjct: 559 LVEFFAPWCGHCKR 572
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 54.0 bits (124), Expect = 9e-08
Identities = 22/44 (50%), Positives = 31/44 (70%)
Frame = +3
Query: 117 TDVVHLNGDSFDAILAKAEHALVVFYAPWCGHCKRIKPEFEKAA 248
+DV+ L +F + +A + LV F+APWCGHCKR+ PE+E AA
Sbjct: 13 SDVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEYETAA 56
Score = 28.3 bits (60), Expect = 5.4
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +1
Query: 553 IVMFYAPWCGHLQK 594
+V F+APWCGH ++
Sbjct: 34 LVEFFAPWCGHCKR 47
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 52.4 bits (120), Expect = 3e-07
Identities = 23/46 (50%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Frame = +3
Query: 120 DVVHLNGDSFDA-ILAKAEHALVVFYAPWCGHCKRIKPEFEKAATK 254
DVV L +F+ +L + LV F+APWCGHC+R+ PE+ KAAT+
Sbjct: 80 DVVELTDTNFEKEVLNSKDLWLVEFFAPWCGHCQRLAPEWAKAATE 125
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +2
Query: 281 LAAVDATKEPDLASRFGVKGYPTLKYFNKG 370
+ A+DAT ASR+ V+GYPT+K F G
Sbjct: 132 VGALDATVHTVTASRYQVQGYPTIKVFAAG 161
Score = 31.5 bits (68), Expect = 0.58
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 514 DFQKHTPEKSKHSIVMFYAPWCGHLQK 594
+F+K +V F+APWCGH Q+
Sbjct: 88 NFEKEVLNSKDLWLVEFFAPWCGHCQR 114
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +3
Query: 90 VVDESWAR-DTDVVHLNGDSFDAILAKAEHALVVFYAPWCGHCKRIKPEFEKAA 248
V+ S+AR + + L FD L E LV FYAPWC C ++P++EKAA
Sbjct: 12 VIAPSYARKENPIFELTDQDFDNFLKDKEVMLVDFYAPWCSDCDNLRPKYEKAA 65
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 49.2 bits (112), Expect = 3e-06
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = +3
Query: 123 VVHLNGDSFDAILAKAEHALVVFYAPWCGHCKRIKPEFEKAATK*RLKRLTEY 281
V LN +FD ++ + + LV FYAPWC HC+ + P+ E AA K L ++
Sbjct: 22 VYDLNAQNFDQMIREKDIMLVDFYAPWCHHCQELLPQLEGAANALAAKGLFQF 74
Score = 27.5 bits (58), Expect = 9.4
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1
Query: 553 IVMFYAPWCGHLQK 594
+V FYAPWC H Q+
Sbjct: 41 LVDFYAPWCHHCQE 54
>SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21)
Length = 186
Score = 44.4 bits (100), Expect = 8e-05
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +3
Query: 9 YNGENKRQAIVEFMRDPVAQPKQKKKDVVDESWARDTDVVH-LNGDSFDAILAKAEHALV 185
Y G + + F+ V +P+ K KD E + VH L ++FD + H V
Sbjct: 55 YTGRRNAEDMKVFVDKIVLKPEGKSKD--SEGLSTSEAGVHILTKNTFDKHIELGLH-FV 111
Query: 186 VFYAPWCGHCKRIKPEFEKAA 248
FYAPWC HC ++ P +E+ A
Sbjct: 112 KFYAPWCIHCIKLAPIWERLA 132
Score = 37.1 bits (82), Expect = 0.012
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +2
Query: 245 GHKVKTEKINGILAAVDATKEPDLASRFGVKGYPTLKYFNKGEFKFDAGHARQED 409
G + EK + +A VD T + +L + ++ YPT+K + G+ K G ED
Sbjct: 9 GEQYSKEKRDLTIAKVDCTSDVNLCVKQNIRAYPTMKLYYDGDIKRYTGRRNAED 63
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 41.9 bits (94), Expect = 4e-04
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 14/74 (18%)
Frame = +3
Query: 69 PKQKKKDVVDESWARDTDVVHL-------------NGDSFDAILAKAEHALVV-FYAPWC 206
P +++D V + W RD D +H+ N +F + +E A VV FYAPWC
Sbjct: 405 PCAQQEDWVHQGW-RDVDSLHMWAYNYLPSIVSEVNSKNFFTDVLASEDAWVVDFYAPWC 463
Query: 207 GHCKRIKPEFEKAA 248
G C R P++E+ A
Sbjct: 464 GPCMRFAPKYEQLA 477
Score = 35.9 bits (79), Expect = 0.027
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +3
Query: 126 VHLNG--DSFDAILAKAEHALVVFYAPWCGHCKRIKPEFEKAA 248
VH G D ++ + + V F+APWC C R+ PE+ KAA
Sbjct: 286 VHALGPEDFPSSVTSPSRPFFVDFFAPWCPPCMRLLPEYRKAA 328
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +2
Query: 290 VDATKEPDLASRFGVKGYPTLKYFNKGEFKFDAGHARQEDQIISFIK 430
VD T L ++ ++ YPT +N + GH D II F++
Sbjct: 341 VDCTVHSQLCHQYNIRSYPTTILYNNSQPHQFIGHHNALD-IIEFVE 386
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/36 (47%), Positives = 26/36 (72%), Gaps = 2/36 (5%)
Frame = +3
Query: 147 FDAILAKAEHALVV--FYAPWCGHCKRIKPEFEKAA 248
F++++ + LVV FYA WCG C++IKP+F+K A
Sbjct: 21 FNSVINNTKDKLVVIDFYAEWCGPCRQIKPKFKKMA 56
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 37.1 bits (82), Expect = 0.012
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +3
Query: 147 FDAILAKAEHALVVFYAPWCGHCKRIKPEFEKAA 248
FD L E A + F A WCG C+ I P+FE+ A
Sbjct: 4 FDKFLKDNEVAAIDFTATWCGPCRMIGPKFEEMA 37
>SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)
Length = 975
Score = 36.7 bits (81), Expect = 0.015
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 123 VVHLNGDSFDAILAKAEH-ALVVFYAPWCGHCKRIKP 230
V + DSFD I+ + L+VFY PWCG C P
Sbjct: 519 VTEVTTDSFDDIVINNDQDVLLVFYTPWCGMCINFAP 555
>SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19)
Length = 335
Score = 35.5 bits (78), Expect = 0.036
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 123 VVHLNGDSFDAILAKAEHALVVFYAPWCGHCKRIKPEFEKAA 248
+V ++ D + ++ + FYAPW HC+RI F++ A
Sbjct: 28 IVEFTNENVDEYVDGSKFVFIFFYAPWDDHCQRILQIFDQVA 69
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +2
Query: 278 ILAAVDATKEPDLASRFGVKGYPTLKYFNKG---EFKFDAGHARQEDQIISFI 427
++ +A ++ +A+R+ + YP +YF KG E +D G + D I FI
Sbjct: 79 VVGKSNAYEDVKIATRYWIDRYPMFRYFIKGSTTEETYDGGF--KPDDFIRFI 129
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +3
Query: 120 DVVHLNGDSFDAI-LAKAEHALVV--FYAPWCGHCKRIKPEFEKAATK 254
+V+ + DSF ++ + +A LVV F A WCG CK I P F + K
Sbjct: 9 NVIVVEDDSFFSVEIERAGSRLVVIDFTATWCGPCKSIAPVFTNLSMK 56
>SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058)
Length = 664
Score = 33.1 bits (72), Expect = 0.19
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 183 VVFYAPWCGHCKRIKPEFEKAAT 251
V FYAPWCG +R EF AA+
Sbjct: 457 VFFYAPWCGQSRRAVEEFNIAAS 479
>SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05)
Length = 215
Score = 32.7 bits (71), Expect = 0.25
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +3
Query: 147 FDAILAKAEHALVV--FYAPWCGHCKRIKPEFEKAA 248
FD IL+ + + L V F+APW HC ++ E+ A
Sbjct: 12 FDRILSSSSNVLAVVHFFAPWAPHCNQMNDVLEELA 47
>SB_48838| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-12)
Length = 556
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -2
Query: 390 PASNLNSPLLKYFRVGYPLTPNLDAKSGSFVAST 289
PA+ +PL ++ GYP T N +G+F +T
Sbjct: 34 PAARYQTPLNNFYNTGYPDTENTTCTTGNFCFTT 67
>SB_51987| Best HMM Match : Peptidase_C1 (HMM E-Value=6.4)
Length = 188
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +3
Query: 84 KDVVDESWARDTDVVHLNGDSFDAILAKAEHALVVFYA 197
+ + S ARDT++ + D F+++ + EH + +FY+
Sbjct: 61 ESICSASGARDTNLSGYSSDGFESLQSSTEHDVTLFYS 98
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 147 FDAILAKAEHALVV--FYAPWCGHCKRIKPEFEKAATK 254
F A L A LVV F A WCG CK I P + + K
Sbjct: 18 FTAELTNAGTKLVVADFTASWCGPCKSIAPVYSGLSEK 55
>SB_1718| Best HMM Match : I-set (HMM E-Value=3.8e-07)
Length = 1017
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -2
Query: 375 NSPLLKYFRVGYPLTPNLD-AKSGSFVASTAANIPLIFSVFTLWPLFR 235
N P+L+Y+ V P+T D +++G A N P+ F+ TL P R
Sbjct: 749 NHPVLRYYDVSKPVTIQYDSSETGLGAALLQVNQPVAFASRTLTPTER 796
>SB_40832| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1496
Score = 29.1 bits (62), Expect = 3.1
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -2
Query: 393 CPASNLNSPLLKYFRVGYPLTPNL 322
CP P++ +F+ G P+TP+L
Sbjct: 533 CPTEGFPKPIISWFKDGEPITPDL 556
>SB_3185| Best HMM Match : Sec63 (HMM E-Value=0)
Length = 2590
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = -2
Query: 366 LLKYFRVGY--PLTPNLDAKSGSFVASTAANIPL 271
LL FR Y PLTP L AK+ S V+S IP+
Sbjct: 835 LLMRFRESYVPPLTPELTAKTVSSVSSDEGGIPV 868
>SB_56411| Best HMM Match : MoCF_biosynth (HMM E-Value=4.8)
Length = 358
Score = 28.7 bits (61), Expect = 4.1
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Frame = -3
Query: 281 IFR*SFQSLLCGRFFELWFNTFAVSTPGRVEYDQCVFRLC*NSV--KTVPI*MHHISVTS 108
+FR S + ++ FF ++ F++ PG Y VF LC V P+ +
Sbjct: 228 LFRISLE-VVYPMFFAMFTRCFSLCLPGVFRYVYPVFSLCLPGVFRYVYPVFSAMFTRCF 286
Query: 107 PAFINNVFLFLFRLSYGI-SHKLDYGLPFVFTIIW 6
P + VF +++ +S+ + + L LP VF ++
Sbjct: 287 PLCLPGVFRYVYPVSFAMFTRCLSLCLPGVFRYVY 321
>SB_10836| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 458
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +2
Query: 254 VKTEKINGILAAVDATKEPDLASRFGVKGYPTLKYFNKGEFKFDAGHARQED 409
+K KI G+ A++ + P L +R + +L GEF+FD A +ED
Sbjct: 319 IKRRKIYGLSASMGRIESPKLKNRKSISPDSSLD----GEFEFDHESASEED 366
>SB_54416| Best HMM Match : rve (HMM E-Value=1.4e-27)
Length = 1068
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +2
Query: 275 GILAAVDATKEPDLASRFGVKGYPTLKYFNKGE 373
GIL A+D KEP + G+ + T ++++K +
Sbjct: 218 GILEAIDTIKEPAKTQKSGINVFITDEFYSKAQ 250
>SB_53506| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 378
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = -2
Query: 375 NSPLLKYFRVGYPLTPNLDAKSGSFV--ASTAANIPLIFSVFTLWPLFRTLV 226
NSP R GYP + SGS + + A+ L+FSV + WP+ +V
Sbjct: 51 NSPYSSNIR-GYPFL-EISESSGSAILMSGNASGGRLLFSVLSAWPILIFIV 100
>SB_6887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 875
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -2
Query: 387 ASNLNSPLLKYFRVGYPLTPNLDAKSGSFVAST 289
+ + +PL ++ GYP T N +G F +T
Sbjct: 382 SQDTQTPLNNFYNTGYPYTQNTTCTTGDFCFTT 414
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,383,666
Number of Sequences: 59808
Number of extensions: 348563
Number of successful extensions: 963
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 962
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1560464625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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