Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0873
(628 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g47470.2 68415.m05924 thioredoxin family protein similar to p... 61 7e-10
At2g47470.1 68415.m05925 thioredoxin family protein similar to p... 61 7e-10
At1g35620.1 68414.m04425 thioredoxin family protein similar to S... 56 1e-08
At1g77510.1 68414.m09026 protein disulfide isomerase, putative s... 54 6e-08
At1g04980.1 68414.m00497 thioredoxin family protein similar to S... 54 1e-07
At1g21750.2 68414.m02723 protein disulfide isomerase, putative s... 53 1e-07
At1g21750.1 68414.m02722 protein disulfide isomerase, putative s... 53 1e-07
At5g60640.2 68418.m07611 thioredoxin family protein similar to p... 53 2e-07
At5g60640.1 68418.m07610 thioredoxin family protein similar to p... 53 2e-07
At2g32920.1 68415.m04036 thioredoxin family protein similar to S... 51 5e-07
At3g54960.1 68416.m06094 thioredoxin family protein similar to p... 49 2e-06
At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-... 46 2e-05
At4g27080.1 68417.m03893 thioredoxin family protein contains Pfa... 44 8e-05
At3g16110.1 68416.m02035 thioredoxin family protein similar to p... 44 8e-05
At2g01270.1 68415.m00040 thioredoxin family protein low similari... 44 1e-04
At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-... 44 1e-04
At1g15020.2 68414.m01795 thioredoxin family protein low similari... 42 3e-04
At1g15020.1 68414.m01794 thioredoxin family protein low similari... 42 3e-04
At1g52260.1 68414.m05897 thioredoxin family protein similar to p... 41 8e-04
At3g20560.1 68416.m02603 thioredoxin family protein contains Pfa... 40 0.001
At3g03860.1 68416.m00398 expressed protein 36 0.029
At1g50950.1 68414.m05728 thioredoxin-related contains weak hit t... 35 0.038
At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29... 34 0.089
At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29... 33 0.12
At4g21990.1 68417.m03183 5'-adenylylsulfate reductase (APR3) / P... 33 0.12
At1g50320.1 68414.m05641 thioredoxin x nearly identical to thior... 33 0.12
At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-... 33 0.16
At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38... 33 0.21
At1g43560.1 68414.m05000 thioredoxin family protein contains Pfa... 32 0.27
At4g04610.1 68417.m00674 5'-adenylylsulfate reductase (APR1) / P... 32 0.36
At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38... 32 0.36
At1g76760.1 68414.m08933 thioredoxin family protein similar to t... 31 0.47
At5g04260.1 68418.m00417 thioredoxin family protein low similari... 31 0.63
At1g07960.3 68414.m00867 thioredoxin family protein low similari... 31 0.63
At1g07960.2 68414.m00866 thioredoxin family protein low similari... 31 0.63
At1g07960.1 68414.m00865 thioredoxin family protein low similari... 31 0.63
At4g08930.1 68417.m01470 thioredoxin-related contains weak simil... 31 0.83
At1g62180.1 68414.m07014 5'-adenylylsulfate reductase 2, chlorop... 31 0.83
At4g29670.2 68417.m04227 thioredoxin family protein contains Pfa... 30 1.1
At4g29670.1 68417.m04226 thioredoxin family protein contains Pfa... 30 1.1
At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-... 30 1.1
At5g06690.1 68418.m00756 thioredoxin family protein low similiar... 30 1.4
At4g37200.1 68417.m05266 thioredoxin family protein contains Pfa... 30 1.4
At3g53220.1 68416.m05864 thioredoxin family protein low similari... 30 1.4
At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to te... 30 1.4
At3g56420.1 68416.m06275 thioredoxin family protein similar to t... 29 1.9
At3g14540.1 68416.m01842 terpene synthase/cyclase family protein... 29 1.9
At3g08710.1 68416.m01012 thioredoxin family protein similar to t... 29 1.9
At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2) i... 29 2.5
At1g79040.1 68414.m09216 photosystem II 10 kDa polypeptide ident... 29 2.5
At1g77250.1 68414.m08997 PHD finger family protein contains Pfam... 29 2.5
At1g52990.1 68414.m05997 thioredoxin family protein similar to S... 29 2.5
At1g34780.1 68414.m04329 protein disulfide isomerase-related con... 29 2.5
At4g26160.1 68417.m03765 thioredoxin family protein low similari... 29 3.3
At1g31020.1 68414.m03798 thioredoxin o (TRXO2) similar to thiore... 29 3.3
At5g61440.1 68418.m07709 thioredoxin family protein low similari... 28 4.4
At2g17260.1 68415.m01993 glutamate receptor family protein (GLR3... 28 4.4
At5g18950.1 68418.m02251 pentatricopeptide (PPR) repeat-containi... 28 5.8
At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identica... 28 5.8
At3g06730.1 68416.m00798 thioredoxin family protein contains Pfa... 28 5.8
At2g33270.1 68415.m04078 thioredoxin family protein contains Pfa... 28 5.8
At1g06970.1 68414.m00742 cation/hydrogen exchanger, putative (CH... 28 5.8
At4g19010.1 68417.m02802 4-coumarate--CoA ligase family protein ... 27 7.7
At3g14520.1 68416.m01840 terpene synthase/cyclase family protein... 27 7.7
>At2g47470.2 68415.m05924 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 266
Score = 60.9 bits (141), Expect = 7e-10
Identities = 25/41 (60%), Positives = 31/41 (75%)
Frame = +3
Query: 120 DVVHLNGDSFDAILAKAEHALVVFYAPWCGHCKRIKPEFEK 242
DVV L DSF+ + K + ALV FYAPWCGHCK++ PE+EK
Sbjct: 24 DVVVLTDDSFEKEVGKDKGALVEFYAPWCGHCKKLAPEYEK 64
Score = 54.8 bits (126), Expect = 4e-08
Identities = 25/45 (55%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Frame = +3
Query: 120 DVVHLNGDSFDAI-LAKAEHALVVFYAPWCGHCKRIKPEFEKAAT 251
+VV L D+FD I L + + LV FYAPWCGHCK + P +EK AT
Sbjct: 142 NVVVLTPDNFDEIVLDQNKDVLVEFYAPWCGHCKSLAPTYEKVAT 186
Score = 41.1 bits (92), Expect = 6e-04
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +2
Query: 278 ILAAVDATKEPDLASRFGVKGYPTLKYF---NKGEFKFDAGHARQEDQIISFIKD 433
++A +DA L ++GV G+PTLK+F NK +D G R D +SFI +
Sbjct: 195 VIANLDADAHKALGEKYGVSGFPTLKFFPKDNKAGHDYDGG--RDLDDFVSFINE 247
Score = 37.1 bits (82), Expect = 0.010
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = +2
Query: 239 KSGHKVKTEKINGILAAVDATKEPDLASRFGVKGYPTLKYFNKGEFK 379
K G K K + ++A VD ++ + +++GV GYPT+++F KG +
Sbjct: 64 KLGASFKKAK-SVLIAKVDCDEQKSVCTKYGVSGYPTIQWFPKGSLE 109
Score = 34.7 bits (76), Expect = 0.051
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +1
Query: 538 KSKHSIVMFYAPWCGHLQK 594
K K ++V FYAPWCGH +K
Sbjct: 39 KDKGALVEFYAPWCGHCKK 57
Score = 32.3 bits (70), Expect = 0.27
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 514 DFQKHTPEKSKHSIVMFYAPWCGH 585
+F + +++K +V FYAPWCGH
Sbjct: 150 NFDEIVLDQNKDVLVEFYAPWCGH 173
>At2g47470.1 68415.m05925 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 361
Score = 60.9 bits (141), Expect = 7e-10
Identities = 25/41 (60%), Positives = 31/41 (75%)
Frame = +3
Query: 120 DVVHLNGDSFDAILAKAEHALVVFYAPWCGHCKRIKPEFEK 242
DVV L DSF+ + K + ALV FYAPWCGHCK++ PE+EK
Sbjct: 24 DVVVLTDDSFEKEVGKDKGALVEFYAPWCGHCKKLAPEYEK 64
Score = 54.8 bits (126), Expect = 4e-08
Identities = 25/45 (55%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Frame = +3
Query: 120 DVVHLNGDSFDAI-LAKAEHALVVFYAPWCGHCKRIKPEFEKAAT 251
+VV L D+FD I L + + LV FYAPWCGHCK + P +EK AT
Sbjct: 142 NVVVLTPDNFDEIVLDQNKDVLVEFYAPWCGHCKSLAPTYEKVAT 186
Score = 41.1 bits (92), Expect = 6e-04
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +2
Query: 278 ILAAVDATKEPDLASRFGVKGYPTLKYF---NKGEFKFDAGHARQEDQIISFIKD 433
++A +DA L ++GV G+PTLK+F NK +D G R D +SFI +
Sbjct: 195 VIANLDADAHKALGEKYGVSGFPTLKFFPKDNKAGHDYDGG--RDLDDFVSFINE 247
Score = 37.1 bits (82), Expect = 0.010
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = +2
Query: 239 KSGHKVKTEKINGILAAVDATKEPDLASRFGVKGYPTLKYFNKGEFK 379
K G K K + ++A VD ++ + +++GV GYPT+++F KG +
Sbjct: 64 KLGASFKKAK-SVLIAKVDCDEQKSVCTKYGVSGYPTIQWFPKGSLE 109
Score = 34.7 bits (76), Expect = 0.051
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +1
Query: 538 KSKHSIVMFYAPWCGHLQK 594
K K ++V FYAPWCGH +K
Sbjct: 39 KDKGALVEFYAPWCGHCKK 57
Score = 32.3 bits (70), Expect = 0.27
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 514 DFQKHTPEKSKHSIVMFYAPWCGH 585
+F + +++K +V FYAPWCGH
Sbjct: 150 NFDEIVLDQNKDVLVEFYAPWCGH 173
>At1g35620.1 68414.m04425 thioredoxin family protein similar to
SP|Q43116 Protein disulfide isomerase precursor (PDI)
(EC 5.3.4.1) {Ricinus communis}; contains Pfam profile
PF00085: Thioredoxin
Length = 440
Score = 56.4 bits (130), Expect = 1e-08
Identities = 22/51 (43%), Positives = 32/51 (62%)
Frame = +3
Query: 96 DESWARDTDVVHLNGDSFDAILAKAEHALVVFYAPWCGHCKRIKPEFEKAA 248
D+ + D V+ L +FD+ ++ + V FYAPWCGHCKR+ PE + AA
Sbjct: 25 DDQFTLDGTVLELTDSNFDSAISTFDCIFVDFYAPWCGHCKRLNPELDAAA 75
Score = 28.7 bits (61), Expect = 3.3
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +1
Query: 556 VMFYAPWCGHLQK 594
V FYAPWCGH ++
Sbjct: 54 VDFYAPWCGHCKR 66
>At1g77510.1 68414.m09026 protein disulfide isomerase, putative
similar to protein disulfide isomerase precursor
GB:P29828 GI:4704766 [Medicago sativa]; Pfam HMM hit:
PF00085 Thioredoxins
Length = 508
Score = 54.4 bits (125), Expect = 6e-08
Identities = 20/44 (45%), Positives = 33/44 (75%)
Frame = +3
Query: 123 VVHLNGDSFDAILAKAEHALVVFYAPWCGHCKRIKPEFEKAATK 254
V+ L+ +F ++K + +V FYAPWCGHC+++ PE+EKAA++
Sbjct: 31 VLTLDHSNFTETISKHDFIVVEFYAPWCGHCQKLAPEYEKAASE 74
Score = 43.2 bits (97), Expect = 1e-04
Identities = 16/37 (43%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Frame = +3
Query: 141 DSFDAILAKA-EHALVVFYAPWCGHCKRIKPEFEKAA 248
+S D I+ K+ ++ L+ FYAPWCGHC+++ P ++ A
Sbjct: 380 ESLDDIVFKSGKNVLIEFYAPWCGHCQKLAPILDEVA 416
Score = 37.9 bits (84), Expect = 0.005
Identities = 17/30 (56%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = +1
Query: 511 LDFQKHTPEKSKHS--IVMFYAPWCGHLQK 594
LD T SKH +V FYAPWCGH QK
Sbjct: 34 LDHSNFTETISKHDFIVVEFYAPWCGHCQK 63
Score = 34.3 bits (75), Expect = 0.067
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 535 EKSKHSIVMFYAPWCGHLQK 594
+ K+ ++ FYAPWCGH QK
Sbjct: 388 KSGKNVLIEFYAPWCGHCQK 407
Score = 33.1 bits (72), Expect = 0.16
Identities = 17/53 (32%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Frame = +2
Query: 281 LAAVDATKEP--DLASRFGVKGYPTLKYF-NKGEFKFDAGHARQEDQIISFIK 430
LA +DA++E + A+ + ++G+PTLK N G+ D R+ + I++++K
Sbjct: 84 LAKIDASEEANKEFANEYKIQGFPTLKILRNGGKSVQDYNGPREAEGIVTYLK 136
Score = 28.3 bits (60), Expect = 4.4
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 278 ILAAVDATKEPDLASRFGVKGYPTLKYFN--KGEFKFDAGHARQEDQIISFIK 430
I+A +DAT + F VKG+PT+ YF G G +ED I+F++
Sbjct: 426 IIAKLDATANDIPSDTFDVKGFPTI-YFRSASGNVVVYEGDRTKED-FINFVE 476
>At1g04980.1 68414.m00497 thioredoxin family protein similar to
SP|Q63081 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Rattus norvegicus}; contains Pfam profile
PF00085: Thioredoxin
Length = 443
Score = 53.6 bits (123), Expect = 1e-07
Identities = 20/42 (47%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = +3
Query: 126 VHLNGDSFDAILAKAEHALVV-FYAPWCGHCKRIKPEFEKAA 248
V LN +FD ++ +++ +V F+APWCGHCK++ PE++KAA
Sbjct: 166 VELNSSNFDELVTESKELWIVEFFAPWCGHCKKLAPEWKKAA 207
Score = 41.9 bits (94), Expect = 3e-04
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +3
Query: 105 WARDTDVVHLNGDSFDA-ILAKAEHALVVFYAPWCGHCKRIKPEFEKAAT 251
+ + V+ L +F + +L LV F+APWCGHC+ + P +EK A+
Sbjct: 24 YGSSSPVLQLTPSNFKSKVLNSNGVVLVEFFAPWCGHCQSLTPTWEKVAS 73
Score = 36.3 bits (80), Expect = 0.017
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +2
Query: 281 LAAVDATKEPDLASRFGVKGYPTLKYFNKGEFKFDAGHARQEDQIISF 424
+AA+DA ++ +GV+G+PT+K F G+ D AR I F
Sbjct: 81 VAAIDADAHKSVSQDYGVRGFPTIKVFVPGKPPIDYQGARDAKSISQF 128
Score = 31.9 bits (69), Expect = 0.36
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 514 DFQKHTPEKSKHSIVMFYAPWCGHLQK 594
+F + E + IV F+APWCGH +K
Sbjct: 172 NFDELVTESKELWIVEFFAPWCGHCKK 198
Score = 29.1 bits (62), Expect = 2.5
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +1
Query: 553 IVMFYAPWCGHLQ 591
+V F+APWCGH Q
Sbjct: 50 LVEFFAPWCGHCQ 62
>At1g21750.2 68414.m02723 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 487
Score = 53.2 bits (122), Expect = 1e-07
Identities = 21/43 (48%), Positives = 31/43 (72%)
Frame = +3
Query: 123 VVHLNGDSFDAILAKAEHALVVFYAPWCGHCKRIKPEFEKAAT 251
V+ L+ +F + K + +V FYAPWCGHCK++ PE+EKAA+
Sbjct: 32 VLTLDHTNFTDTINKHDFIVVEFYAPWCGHCKQLAPEYEKAAS 74
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +3
Query: 39 VEFMRDPVAQPKQKKKDVVDESWARDTDVVHLNGDSFDAI-LAKAEHALVVFYAPWCGHC 215
V+ +D P +K + + E+ + V + DS D I L ++ L+ FYAPWCGHC
Sbjct: 351 VKDFKDGKIAPHKKSQPIPAEN---NEPVKVVVSDSLDDIVLNSGKNVLLEFYAPWCGHC 407
Query: 216 KRIKPEFEKAA 248
+++ P ++ A
Sbjct: 408 QKLAPILDEVA 418
Score = 35.1 bits (77), Expect = 0.038
Identities = 17/54 (31%), Positives = 36/54 (66%), Gaps = 3/54 (5%)
Frame = +2
Query: 278 ILAAVDATKEP--DLASRFGVKGYPTLKYF-NKGEFKFDAGHARQEDQIISFIK 430
+LA +DA++E + A+++ V+G+PT+K F N G+ + R+ + I++++K
Sbjct: 84 VLAKIDASEETNREFATQYEVQGFPTIKIFRNGGKAVQEYNGPREAEGIVTYLK 137
Score = 33.1 bits (72), Expect = 0.16
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = +1
Query: 511 LDFQKHTPEKSKHS--IVMFYAPWCGHLQK 594
LD T +KH +V FYAPWCGH ++
Sbjct: 35 LDHTNFTDTINKHDFIVVEFYAPWCGHCKQ 64
Score = 33.1 bits (72), Expect = 0.16
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 544 KHSIVMFYAPWCGHLQK 594
K+ ++ FYAPWCGH QK
Sbjct: 393 KNVLLEFYAPWCGHCQK 409
>At1g21750.1 68414.m02722 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 501
Score = 53.2 bits (122), Expect = 1e-07
Identities = 21/43 (48%), Positives = 31/43 (72%)
Frame = +3
Query: 123 VVHLNGDSFDAILAKAEHALVVFYAPWCGHCKRIKPEFEKAAT 251
V+ L+ +F + K + +V FYAPWCGHCK++ PE+EKAA+
Sbjct: 32 VLTLDHTNFTDTINKHDFIVVEFYAPWCGHCKQLAPEYEKAAS 74
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +3
Query: 39 VEFMRDPVAQPKQKKKDVVDESWARDTDVVHLNGDSFDAI-LAKAEHALVVFYAPWCGHC 215
V+ +D P +K + + E+ + V + DS D I L ++ L+ FYAPWCGHC
Sbjct: 351 VKDFKDGKIAPHKKSQPIPAEN---NEPVKVVVSDSLDDIVLNSGKNVLLEFYAPWCGHC 407
Query: 216 KRIKPEFEKAA 248
+++ P ++ A
Sbjct: 408 QKLAPILDEVA 418
Score = 35.1 bits (77), Expect = 0.038
Identities = 17/54 (31%), Positives = 36/54 (66%), Gaps = 3/54 (5%)
Frame = +2
Query: 278 ILAAVDATKEP--DLASRFGVKGYPTLKYF-NKGEFKFDAGHARQEDQIISFIK 430
+LA +DA++E + A+++ V+G+PT+K F N G+ + R+ + I++++K
Sbjct: 84 VLAKIDASEETNREFATQYEVQGFPTIKIFRNGGKAVQEYNGPREAEGIVTYLK 137
Score = 33.1 bits (72), Expect = 0.16
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = +1
Query: 511 LDFQKHTPEKSKHS--IVMFYAPWCGHLQK 594
LD T +KH +V FYAPWCGH ++
Sbjct: 35 LDHTNFTDTINKHDFIVVEFYAPWCGHCKQ 64
Score = 33.1 bits (72), Expect = 0.16
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 544 KHSIVMFYAPWCGHLQK 594
K+ ++ FYAPWCGH QK
Sbjct: 393 KNVLLEFYAPWCGHCQK 409
Score = 27.9 bits (59), Expect = 5.8
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +2
Query: 278 ILAAVDATKEPDLASRFGVKGYPTLKYFN--KGEFKFDAGHARQEDQIISFI 427
++A +DAT F VKG+PT+ YF G G +ED ISF+
Sbjct: 428 VIAKLDATANDFPKDTFDVKGFPTI-YFKSASGNVVVYEGDRTKED-FISFV 477
>At5g60640.2 68418.m07611 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 536
Score = 52.8 bits (121), Expect = 2e-07
Identities = 20/47 (42%), Positives = 31/47 (65%)
Frame = +3
Query: 114 DTDVVHLNGDSFDAILAKAEHALVVFYAPWCGHCKRIKPEFEKAATK 254
+ DVV + +F ++ ++ LV FYAPWCGHC+ + PE+ AAT+
Sbjct: 102 EKDVVVIKERNFTDVIENNQYVLVEFYAPWCGHCQSLAPEYAAAATE 148
Score = 49.2 bits (112), Expect = 2e-06
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +3
Query: 81 KKDVVDESWARDTDVVHLNGDSFDAI-LAKAEHALVVFYAPWCGHCKRIKPEFEKAA 248
K D + E D DV + GD+FD I L ++ L+ YAPWCGHC+ ++P + K A
Sbjct: 431 KSDPIPEK--NDEDVKIVVGDNFDEIVLDDSKDVLLEVYAPWCGHCQALEPMYNKLA 485
Score = 45.2 bits (102), Expect = 4e-05
Identities = 21/51 (41%), Positives = 35/51 (68%)
Frame = +2
Query: 278 ILAAVDATKEPDLASRFGVKGYPTLKYFNKGEFKFDAGHARQEDQIISFIK 430
+LA +DAT+E +LA + V+G+PTL +F GE K G R ++ I++++K
Sbjct: 155 VLAKIDATEENELAQEYRVQGFPTLLFFVDGEHKPYTG-GRTKETIVTWVK 204
Score = 33.5 bits (73), Expect = 0.12
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +1
Query: 535 EKSKHSIVMFYAPWCGHLQ 591
E +++ +V FYAPWCGH Q
Sbjct: 118 ENNQYVLVEFYAPWCGHCQ 136
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 514 DFQKHTPEKSKHSIVMFYAPWCGHLQ 591
+F + + SK ++ YAPWCGH Q
Sbjct: 450 NFDEIVLDDSKDVLLEVYAPWCGHCQ 475
>At5g60640.1 68418.m07610 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 597
Score = 52.8 bits (121), Expect = 2e-07
Identities = 20/47 (42%), Positives = 31/47 (65%)
Frame = +3
Query: 114 DTDVVHLNGDSFDAILAKAEHALVVFYAPWCGHCKRIKPEFEKAATK 254
+ DVV + +F ++ ++ LV FYAPWCGHC+ + PE+ AAT+
Sbjct: 102 EKDVVVIKERNFTDVIENNQYVLVEFYAPWCGHCQSLAPEYAAAATE 148
Score = 49.2 bits (112), Expect = 2e-06
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +3
Query: 81 KKDVVDESWARDTDVVHLNGDSFDAI-LAKAEHALVVFYAPWCGHCKRIKPEFEKAA 248
K D + E D DV + GD+FD I L ++ L+ YAPWCGHC+ ++P + K A
Sbjct: 431 KSDPIPEK--NDEDVKIVVGDNFDEIVLDDSKDVLLEVYAPWCGHCQALEPMYNKLA 485
Score = 45.2 bits (102), Expect = 4e-05
Identities = 21/51 (41%), Positives = 35/51 (68%)
Frame = +2
Query: 278 ILAAVDATKEPDLASRFGVKGYPTLKYFNKGEFKFDAGHARQEDQIISFIK 430
+LA +DAT+E +LA + V+G+PTL +F GE K G R ++ I++++K
Sbjct: 155 VLAKIDATEENELAQEYRVQGFPTLLFFVDGEHKPYTG-GRTKETIVTWVK 204
Score = 33.5 bits (73), Expect = 0.12
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +1
Query: 535 EKSKHSIVMFYAPWCGHLQ 591
E +++ +V FYAPWCGH Q
Sbjct: 118 ENNQYVLVEFYAPWCGHCQ 136
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 514 DFQKHTPEKSKHSIVMFYAPWCGHLQ 591
+F + + SK ++ YAPWCGH Q
Sbjct: 450 NFDEIVLDDSKDVLLEVYAPWCGHCQ 475
>At2g32920.1 68415.m04036 thioredoxin family protein similar to
SP|Q15084 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Homo sapiens}; contains Pfam profile PF00085:
Thioredoxin
Length = 440
Score = 51.2 bits (117), Expect = 5e-07
Identities = 19/42 (45%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = +3
Query: 126 VHLNGDSFDAILAKAEHALVV-FYAPWCGHCKRIKPEFEKAA 248
V LN +FD ++ ++ +V F+APWCGHCK++ PE+++AA
Sbjct: 165 VELNASNFDDLVIESNELWIVEFFAPWCGHCKKLAPEWKRAA 206
Score = 46.0 bits (104), Expect = 2e-05
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +3
Query: 87 DVVDESWARDTDVVHLNGDSFDA-ILAKAEHALVVFYAPWCGHCKRIKPEFEKAA 248
D+ + + VV L +F + +L LV F+APWCGHCK + P +EK A
Sbjct: 20 DLSSALYGSSSPVVQLTASNFKSKVLNSNGVVLVEFFAPWCGHCKALTPTWEKVA 74
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +2
Query: 281 LAAVDATKEPDLASRFGVKGYPTLKYFNKGEFKFDAGHARQEDQIISF 424
+AA+DA A +G+KG+PT+K F G+ D AR I +F
Sbjct: 83 VAAIDADAHQSAAQDYGIKGFPTIKVFVPGKAPIDYQGARDAKSIANF 130
Score = 30.7 bits (66), Expect = 0.83
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 535 EKSKHSIVMFYAPWCGHLQK 594
E ++ IV F+APWCGH +K
Sbjct: 178 ESNELWIVEFFAPWCGHCKK 197
Score = 27.5 bits (58), Expect = 7.7
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +1
Query: 553 IVMFYAPWCGH 585
+V F+APWCGH
Sbjct: 52 LVEFFAPWCGH 62
>At3g54960.1 68416.m06094 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 579
Score = 49.2 bits (112), Expect = 2e-06
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +3
Query: 114 DTDVVHLNGDSFDAILAKAEHALVVFYAPWCGHCKRIKPEFEKAATK 254
+ DV L D+F + A+V FYAPWCG C+ + PE+ AAT+
Sbjct: 98 EKDVAVLTKDNFTEFVGNNSFAMVEFYAPWCGACQALTPEYAAAATE 144
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = +3
Query: 81 KKDVVDESWARDTDVVHLNGDSFDAI-LAKAEHALVVFYAPWCGHCKRIKPEFEK 242
K D + E+ D DV + G++FD I L +++ L+ YAPWCGHC+ +P + K
Sbjct: 427 KSDPLPEN--NDGDVKVIVGNNFDEIVLDESKDVLLEIYAPWCGHCQSFEPIYNK 479
Score = 43.2 bits (97), Expect = 1e-04
Identities = 19/50 (38%), Positives = 33/50 (66%)
Frame = +2
Query: 281 LAAVDATKEPDLASRFGVKGYPTLKYFNKGEFKFDAGHARQEDQIISFIK 430
LA +DAT+E DLA ++ ++G+PT+ F GE + R +D I++++K
Sbjct: 151 LAKIDATEEGDLAQKYEIQGFPTVFLFVDGEMRKTYEGERTKDGIVTWLK 200
Score = 31.9 bits (69), Expect = 0.36
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 514 DFQKHTPEKSKHSIVMFYAPWCGHLQKHQ 600
+F + ++SK ++ YAPWCGH Q +
Sbjct: 446 NFDEIVLDESKDVLLEIYAPWCGHCQSFE 474
>At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-M2)
nearly identical to SP|Q9SEU8 Thioredoxin M-type 2,
chloroplast precursor (TRX-M2) {Arabidopsis thaliana}
Length = 186
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Frame = +3
Query: 60 VAQPK--QKKKDVVDESWARDTDVVHLNGDSFDAILAKAEHALVV-FYAPWCGHCKRIKP 230
+ QP+ + ++ VV E+ TD+ +N ++D+++ KA +VV F+APWCG CK I P
Sbjct: 59 IHQPRVSRLRRAVVCEAQETTTDIQVVNDSTWDSLVLKATGPVVVDFWAPWCGPCKMIDP 118
>At4g27080.1 68417.m03893 thioredoxin family protein contains Pfam
PF00085: Thioredoxin
Length = 480
Score = 44.0 bits (99), Expect = 8e-05
Identities = 20/43 (46%), Positives = 25/43 (58%)
Frame = +3
Query: 120 DVVHLNGDSFDAILAKAEHALVVFYAPWCGHCKRIKPEFEKAA 248
D V L G +FD + +V FYAPWC C +KP +EKAA
Sbjct: 142 DSVPLTGRNFDTFTHQFPILVVNFYAPWCYWCNLLKPSWEKAA 184
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +2
Query: 278 ILAAVDATKEPDLASRFGVKGYPTLKYFNKG-EFKFDAGHARQE 406
ILA VD T+E DL R ++GYP+++ F KG + K D H E
Sbjct: 200 ILAKVDCTQEGDLCRRNHIQGYPSIRIFRKGSDLKDDNAHHDHE 243
>At3g16110.1 68416.m02035 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 534
Score = 44.0 bits (99), Expect = 8e-05
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 123 VVHLNGDSFDAILAKAEHALVVFYAPWCGHCKRIKPEFEKAAT 251
VV LNGD+ ++ E+ +V+ YAPWC + P F +AAT
Sbjct: 77 VVELNGDNTKRLIDGNEYVMVLGYAPWCARSAELMPRFAEAAT 119
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +2
Query: 278 ILAAVDATKEPDLASRFGVKGYPTLKYFNKGEFKFDAGHARQEDQII 418
++A +D + +AS+ +KG+PTL F G + G E+ +I
Sbjct: 129 LMAKIDGERYSKVASQLEIKGFPTLLLFVNGTSQSYTGGFSSEEIVI 175
>At2g01270.1 68415.m00040 thioredoxin family protein low similarity
to quiescin [Homo sapiens] GI:13257405; contains Pfam
profiles PF00085: Thioredoxin, PF04777: Erv1 / Alr
family
Length = 495
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Frame = +3
Query: 126 VHLNGDSFDAIL--AKAEHALVVFYAPWCGHCKRIKPEFEKAA 248
V LN +FD++L A++A+V F+A WC C+ KP +EK A
Sbjct: 38 VELNTTNFDSVLKDTPAKYAVVEFFAHWCPACRNYKPHYEKVA 80
>At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-M1)
nearly identical to SP|O48737 Thioredoxin M-type 1,
chloroplast precursor (TRX-M1) {Arabidopsis thaliana};
similar to ESTs gb|T13714, gb|H76398, gb|N37762,
gb|AA042639, gb|T21104, emb|Z30901
Length = 179
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +3
Query: 81 KKDVVDESWARDTDVVHLNGDSFDAILAKAEHALVV-FYAPWCGHCKRIKPEFEKAATK 254
++ V+ E+ T + +N ++D+++ KA+ + V F+APWCG CK I P + A K
Sbjct: 62 RRGVICEAQDTATGIPVVNDSTWDSLVLKADEPVFVDFWAPWCGPCKMIDPIVNELAQK 120
>At1g15020.2 68414.m01795 thioredoxin family protein low similarity
to FAD-dependent sulfhydryl oxidase-2 [Rattus
norvegicus] GI:12483919; contains Pfam profiles PF00085:
Thioredoxin, PF04777: Erv1 / Alr family
Length = 528
Score = 41.9 bits (94), Expect = 3e-04
Identities = 16/45 (35%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = +3
Query: 120 DVVHLNGDSFDAIL--AKAEHALVVFYAPWCGHCKRIKPEFEKAA 248
+ + LN +FD++ + A++A++ F+A WC C+ KP +EK A
Sbjct: 42 NAIELNATNFDSVFQDSPAKYAVLEFFAHWCPACRNYKPHYEKVA 86
>At1g15020.1 68414.m01794 thioredoxin family protein low similarity
to FAD-dependent sulfhydryl oxidase-2 [Rattus
norvegicus] GI:12483919; contains Pfam profiles PF00085:
Thioredoxin, PF04777: Erv1 / Alr family
Length = 502
Score = 41.9 bits (94), Expect = 3e-04
Identities = 16/45 (35%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = +3
Query: 120 DVVHLNGDSFDAIL--AKAEHALVVFYAPWCGHCKRIKPEFEKAA 248
+ + LN +FD++ + A++A++ F+A WC C+ KP +EK A
Sbjct: 42 NAIELNATNFDSVFQDSPAKYAVLEFFAHWCPACRNYKPHYEKVA 86
>At1g52260.1 68414.m05897 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 537
Score = 40.7 bits (91), Expect = 8e-04
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3
Query: 123 VVHLNGDSFDAILAKAEHALVVFYAPWCGHCKRIKPEFEKAAT 251
V+ LNGD ++ E +V+ YAPWC + P F +AAT
Sbjct: 79 VLELNGDYTKRVIDGNEFVMVLGYAPWCARSAELMPRFAEAAT 121
Score = 30.7 bits (66), Expect = 0.83
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +2
Query: 278 ILAAVDATKEPDLASRFGVKGYPTLKYFNKGEFKFDAGHARQEDQII 418
++A +D + +AS +KG+PTL F G G + ED +I
Sbjct: 131 LMAKIDGDRYSKIASELEIKGFPTLLLFVNGTSLTYNGGSSAEDIVI 177
>At3g20560.1 68416.m02603 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 483
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +2
Query: 278 ILAAVDATKEPDLASRFGVKGYPTLKYFNKG-EFKFDAGHARQE 406
+L VD T+EP L R ++GYP+++ F KG + + D GH E
Sbjct: 200 LLGNVDCTEEPALCKRNHIQGYPSIRIFRKGSDLREDHGHHEHE 243
Score = 35.5 bits (78), Expect = 0.029
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +3
Query: 126 VHLNGDSFDAILAKAEHALVVFYAPWCGHCKRIKPEFEKAA 248
+ L SF+A+ +V F APWC R+KP +EKAA
Sbjct: 144 IPLTSASFEALSHHFPILVVNFNAPWCYWSNRLKPSWEKAA 184
>At3g03860.1 68416.m00398 expressed protein
Length = 300
Score = 35.5 bits (78), Expect = 0.029
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = +3
Query: 117 TDVVHLNGDSFDAILAKAE---HALVVFYAPWCGHCKRIKPEFE 239
T + ++GDS D ++A + V+FYA WC + ++P+F+
Sbjct: 54 TPPIEVDGDSLDRLMASQHGNAYMSVLFYASWCPFSRAVRPKFD 97
>At1g50950.1 68414.m05728 thioredoxin-related contains weak hit to
Pfam PF00085: Thioredoxin; contains 2 predicted
transmembrane domains
Length = 484
Score = 35.1 bits (77), Expect = 0.038
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 126 VHLNGDSFDAILAKAEHALVVFYAPWCGHCKRIKPEFEKAA 248
+ L G +F+ + +V FYAPWC R+KP + KA+
Sbjct: 145 IPLTGAAFEKFTHHFQILVVNFYAPWCYWSNRLKPSWVKAS 185
Score = 34.7 bits (76), Expect = 0.051
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 278 ILAAVDATKEPDLASRFGVKGYPTLKYFNKGE-FKFDAGHARQE 406
+L +VD T+EP L ++GYP+++ F +G + D G+ E
Sbjct: 201 LLGSVDCTEEPTLCKSNHIQGYPSIRIFRRGSGLREDHGNHEHE 244
>At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 178
Score = 33.9 bits (74), Expect = 0.089
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +3
Query: 123 VVHLNGDSFDAILAKAEHALVVF--YAPWCGHCKRIKPEFEKAATK 254
V ++ D+F I+ A LVV Y WCG CK I P+++ + K
Sbjct: 70 VTEVDKDTFWPIVKAAGEKLVVLDMYTQWCGPCKVIAPKYKALSEK 115
>At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 185
Score = 33.5 bits (73), Expect = 0.12
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +3
Query: 123 VVHLNGDSFDAILAKAEHALVVF--YAPWCGHCKRIKPEFEKAATK 254
V ++ D+F I+ A +VV Y WCG CK I P++++ + K
Sbjct: 80 VTEVDKDTFWPIVKAAGDKIVVLDMYTQWCGPCKVIAPKYKELSEK 125
>At4g21990.1 68417.m03183 5'-adenylylsulfate reductase (APR3) / PAPS
reductase homolog (PRH26) identical to
5'-adenylylsulfate reductase [Arabidopsis thaliana]
GI:2738760; identical to cDNA PAPS reductase homolog
(PRH26) GI:1710113
Length = 458
Score = 33.5 bits (73), Expect = 0.12
Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = +3
Query: 120 DVVHLNGDSFDAILA---KAEHALVVFYAPWCGHCKRIKPEFEKAATK 254
+VV+L+ + ++ + E +VV YAPWC C+ ++ F++ A K
Sbjct: 347 NVVNLSRQGIENLMKLENRKEAWIVVLYAPWCPFCQAMEASFDELADK 394
>At1g50320.1 68414.m05641 thioredoxin x nearly identical to
thioredoxin x GB:AAF15952 GI:6539616 from [Arabidopsis
thaliana]
Length = 182
Score = 33.5 bits (73), Expect = 0.12
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 156 ILAKAEHALVVFYAPWCGHCKRIKPEFE 239
+L A+ LV F A WCG CK I P E
Sbjct: 83 VLESAQPVLVEFVATWCGPCKLIYPAME 110
>At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-M4)
nearly identical to SP|Q9SEU6 Thioredoxin M-type 4,
chloroplast precursor (TRX-M4) {Arabidopsis thaliana}
Length = 193
Score = 33.1 bits (72), Expect = 0.16
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 99 ESWARDTDVVHLNGDSFDA-ILAKAEHALVVFYAPWCGHCKRIKPEFEKAA 248
++ A +V +L+ + +L LV F+APWCG C+ I P ++ A
Sbjct: 80 DTTAAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHPIVDQLA 130
Score = 28.3 bits (60), Expect = 4.4
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 290 VDATKEPDLASRFGVKGYPTLKYFNKGEFK 379
++ + P+ A+R+G++ PT+ F GE K
Sbjct: 142 INTDESPNTANRYGIRSVPTVIIFKGGEKK 171
>At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 148
Score = 32.7 bits (71), Expect = 0.21
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 180 LVVFYAPWCGHCKRIKPEFEKAATK 254
++ F A WCG CK ++P+ E+ A K
Sbjct: 63 VIEFTAKWCGPCKTLEPKLEELAAK 87
>At1g43560.1 68414.m05000 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to thioredoxin
GI:142153 from [Synechococcus PCC6301]
Length = 167
Score = 32.3 bits (70), Expect = 0.27
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +3
Query: 141 DSFDAILAKAEHALVV-FYAPWCGHCKRIKP 230
+SFD +L ++ ++V FYA WCG C+ + P
Sbjct: 66 NSFDDLLQNSDKPVLVDFYATWCGPCQLMVP 96
>At4g04610.1 68417.m00674 5'-adenylylsulfate reductase (APR1) / PAPS
reductase homolog (PRH19) identical to
5'-adenylylsulfate reductase [Arabidopsis thaliana]
GI:2738756; identical to cDNA PAPS reductase homolog
(PRH19) GI:1710111
Length = 465
Score = 31.9 bits (69), Expect = 0.36
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 165 KAEHALVVFYAPWCGHCKRIKPEFEKAATK 254
+ E +VV YAPWC C+ ++ +++ A K
Sbjct: 372 RKEPWIVVLYAPWCPFCQAMEASYDELADK 401
>At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 129
Score = 31.9 bits (69), Expect = 0.36
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 147 FDAILAKAEHALVVFYAPWCGHCKRIKPEFEKAATK 254
FD++ + ++ F A WCG CK ++P + A+K
Sbjct: 36 FDSMKGSNKLLVIDFTAVWCGPCKAMEPRVREIASK 71
>At1g76760.1 68414.m08933 thioredoxin family protein similar to
thioredoxin CH2, M-type, chloroplast precursor GB:P23400
SP|P23400 [Chlamydomonas reinhardtii]; contains Pfam
profile: PF00085 Thioredoxin
Length = 172
Score = 31.5 bits (68), Expect = 0.47
Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +3
Query: 141 DSFDAILAKAEHALVV-FYAPWCGHCKRIKP 230
DSF+ +L ++ ++V +YA WCG C+ + P
Sbjct: 71 DSFEDLLVNSDKPVLVDYYATWCGPCQFMVP 101
>At5g04260.1 68418.m00417 thioredoxin family protein low similarity
to SP|P29429 Thioredoxin. [Aspergillus nidulans]
{Emericella nidulans}; contains Pfam profile: PF00085
Thioredoxin
Length = 192
Score = 31.1 bits (67), Expect = 0.63
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Frame = +3
Query: 138 GDS-FDAILAKA----EHALVVFYAPWCGHCKRIKPEFEKAATK 254
G+S FD ++ A E ++V+ A WC C +KP+ EK A +
Sbjct: 83 GESHFDQVMEDAQKLGESVVIVWMAAWCRKCIYLKPKLEKLAAE 126
>At1g07960.3 68414.m00867 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 31.1 bits (67), Expect = 0.63
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 120 DVVHLNGDSF-DAILAKAEHALVVFYAPWCGHCKRI 224
+V+ L ++F D I K V F PWC HCK++
Sbjct: 26 EVITLTPETFSDKIKEKDTAWFVKFCVPWCKHCKKL 61
>At1g07960.2 68414.m00866 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 31.1 bits (67), Expect = 0.63
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 120 DVVHLNGDSF-DAILAKAEHALVVFYAPWCGHCKRI 224
+V+ L ++F D I K V F PWC HCK++
Sbjct: 26 EVITLTPETFSDKIKEKDTAWFVKFCVPWCKHCKKL 61
>At1g07960.1 68414.m00865 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 31.1 bits (67), Expect = 0.63
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 120 DVVHLNGDSF-DAILAKAEHALVVFYAPWCGHCKRI 224
+V+ L ++F D I K V F PWC HCK++
Sbjct: 26 EVITLTPETFSDKIKEKDTAWFVKFCVPWCKHCKKL 61
>At4g08930.1 68417.m01470 thioredoxin-related contains weak
similarity to Swiss-Prot:Q39239 thioredoxin H-type 4
(TRX-H-4). [Mouse-ear cress]
Length = 295
Score = 30.7 bits (66), Expect = 0.83
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +3
Query: 165 KAEHALVVFYAPWCGHCKRIKPEFE 239
K ++A ++FYA WC + ++P F+
Sbjct: 73 KCDYAALLFYASWCPFSRLVRPSFD 97
>At1g62180.1 68414.m07014 5'-adenylylsulfate reductase 2,
chloroplast (APR2) (APSR) / adenosine 5'-phosphosulfate
5'-adenylylsulfate (APS) sulfotransferase 2 /
3'-phosphoadenosine-5'-phosphosulfate (PAPS) reductase
homolog 43 (PRH-43) identical to SP|P92981
5'-adenylylsulfate reductase 2, chloroplast precursor
(EC 1.8.4.9) (Adenosine 5'-phosphosulfate
5'-adenylylsulfate sulfotransferase 2) (APS
sulfotransferase 2) (Thioredoxin independent APS
reductase 2) (3'-phosphoadenosine-5'-phosphosulfate
reductase homolog 43) (PAPS reductase homolog 43)
(Prh-43) {Arabidopsis thaliana}; identical to cDNA PAPS
reductase homolog (PRH43) GI:1710115
Length = 454
Score = 30.7 bits (66), Expect = 0.83
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 165 KAEHALVVFYAPWCGHCKRIKPEFEKAATK 254
+ E LVV YAPWC C+ ++ + + A K
Sbjct: 361 RKEAWLVVLYAPWCPFCQAMEASYIELAEK 390
>At4g29670.2 68417.m04227 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 236
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +3
Query: 126 VHLNGDSFDAILAKAEHALVV-FYAPWCGHCKRIKPEFEKAATK 254
+H + A+ E ++V FY WC C+ + P+ K A +
Sbjct: 108 IHSTEEFLSALSGAGERLVIVEFYGTWCASCRALFPKLCKTAVE 151
>At4g29670.1 68417.m04226 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 235
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +3
Query: 126 VHLNGDSFDAILAKAEHALVV-FYAPWCGHCKRIKPEFEKAATK 254
+H + A+ E ++V FY WC C+ + P+ K A +
Sbjct: 108 IHSTEEFLSALSGAGERLVIVEFYGTWCASCRALFPKLCKTAVE 151
>At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-M3)
identical to SP|Q9SEU7 Thioredoxin M-type 3, chloroplast
precursor (TRX-M3) {Arabidopsis thaliana}
Length = 173
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 111 RDTDVVHLNGDSF-DAILAKAEHALVVFYAPWCGHCKRI 224
RD+ + S+ D++L LV FY WCG C+ +
Sbjct: 64 RDSRAAEVTQRSWEDSVLKSETPVLVEFYTSWCGPCRMV 102
>At5g06690.1 68418.m00756 thioredoxin family protein low similiarity
to SP|P34723 Thioredoxin {Penicillium chrysogenum};
contains Pfam profile: PF00085 Thioredoxin
Length = 210
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Frame = +3
Query: 135 NGDSFDAILAKAEHA----LVVFYAPWCGHCKRIKPEFEKAATK 254
N + DA+L+ A ++ + A WC C +KP+ EK A +
Sbjct: 103 NVEELDAVLSHARQLSQPIIIEWMASWCRKCIYLKPKLEKLAAE 146
>At4g37200.1 68417.m05266 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; identical to cDNA
thioredoxin-like protein (hcf164 gene) GI;12049652
Length = 261
Score = 29.9 bits (64), Expect = 1.4
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +3
Query: 147 FDAILAKAEHALVVFYAPWCGHCKRIKPEFEK 242
++ L+ + +V FYA WC C+ + P+ K
Sbjct: 131 YEEALSNGKPTVVEFYADWCEVCRELAPDVYK 162
>At3g53220.1 68416.m05864 thioredoxin family protein low similarity
to SP|P29451 Thioredoxin [Rhesus macaque] {Macaca
mulatta}; contains Pfam profile: PF00085 Thioredoxin
Length = 126
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 150 DAILAKAEHALVVFYAPWCGHCKRIKPEFEK 242
D I + A++ + A WCG C +I P F K
Sbjct: 37 DDIKSSKSPAVINYGASWCGVCSQILPAFRK 67
>At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to
tetratricoredoxin [Arabidopsis thaliana] GI:18041544;
similar to SP|Q42443 Thioredoxin H-type (TRX-H) (Phloem
sap 13 kDa protein-1) {Oryza sativa}; contains Pfam
profile: PF00085 Thioredoxin
Length = 380
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +3
Query: 165 KAEHALVVFY-APWCGHCKRIKPEFEKAATK 254
KA L++++ A WCG C+ + P + AT+
Sbjct: 290 KASRLLILYFTATWCGPCRYMSPLYSNLATQ 320
>At3g56420.1 68416.m06275 thioredoxin family protein similar to
thioredoxin [Nicotiana tabacum] GI:20047; contains Pfam
profile: PF00085 Thioredoxin
Length = 100
Score = 29.5 bits (63), Expect = 1.9
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 195 APWCGHCKRIKPEFEKAATK 254
APWC CK+I+P F A++
Sbjct: 17 APWCVPCKKIEPVFRDLASR 36
>At3g14540.1 68416.m01842 terpene synthase/cyclase family protein
similar to terpene synthase GB:CAA72074 from
[Arabidopsis thaliana]
Length = 602
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +3
Query: 21 NKRQAIVEFMRDPVAQPKQKKKDVVDESWARDTDVVHLNGDSFDAILAKAEHALVVFY 194
NK+ + EFM P+Q ++ +AR DV++ GD + K EH + Y
Sbjct: 540 NKKVVVEEFMNSHDRVPRQVLLRCLN--FARLFDVIYTEGDGYSEPKGKIEHFMTSLY 595
>At3g08710.1 68416.m01012 thioredoxin family protein similar to
thioredoxin H-type GB:P29448 SP|P29448 [Arabidopsis
thaliana], Thioredoxin H-type 2 (TRX-H2) SP|Q07090
{Nicotiana tabacum}; contains Pfam profile: PF00085
Thioredoxin
Length = 140
Score = 29.5 bits (63), Expect = 1.9
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 6/49 (12%)
Frame = +3
Query: 126 VHL--NGDSFDAILAKAEH--ALVV--FYAPWCGHCKRIKPEFEKAATK 254
VHL +S+D LA+A+ +VV F A WCG CK + P F + + K
Sbjct: 25 VHLITTKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAPFFIELSEK 73
>At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2)
identical to SP|Q38879 Thioredoxin H-type 2 (TRX-H-2)
{Arabidopsis thaliana}; identical to cDNA (Gif2) mRNA
for thioredoxin GI:992963
Length = 133
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 147 FDAILAKAEHALVVFYAPWCGHCKRIKPEFEKAATK 254
F+ I + +V F A WCG C+ I+P A K
Sbjct: 40 FNEIKESNKLLVVDFSASWCGPCRMIEPAIHAMADK 75
>At1g79040.1 68414.m09216 photosystem II 10 kDa polypeptide
identical to photosystem II 10 kDa polypeptide,
chloroplast [precursor] SP:P27202 from [Arabidopsis
thaliana]; contains Pfam profile: PF04725 photosystem II
10 kDa polypeptide PsbR
Length = 140
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +2
Query: 251 KVKTEKINGILAAVDATKEPDLASRFGVKGYPTLKYFNK 367
K+KT+K GI ++D D + R G KGY KY +K
Sbjct: 46 KIKTDKPFGINGSMDLRDGVDASGRKG-KGYGVYKYVDK 83
>At1g77250.1 68414.m08997 PHD finger family protein contains Pfam
domain, PF00628: PHD-finger
Length = 522
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = +1
Query: 178 HWSYSTRPGVDTANVLNQSSKKRPQSKD*KD*RNISSCRCYKGARFSVEIWCQGISDSE 354
+WS ++AN ++ SKK K K R+ S+ +C + RFS+E G+S SE
Sbjct: 29 NWSAGCGAMANSANASSRDSKKIQTYKRRKLGRSYSANKCSENDRFSME----GVSHSE 83
>At1g52990.1 68414.m05997 thioredoxin family protein similar to
SP|P48384 Thioredoxin M-type, chloroplast precursor
(TRX-M) {Pisum sativum}; contains Pfam profile PF00085:
Thioredoxin
Length = 313
Score = 29.1 bits (62), Expect = 2.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 162 AKAEHALVVFYAPWCGHCKRIKPEFEK 242
++ H +V+F A WCG C+ + P K
Sbjct: 225 SQTPHVMVMFTARWCGPCRDMIPILNK 251
>At1g34780.1 68414.m04329 protein disulfide isomerase-related
contains weak similarity to Pfam:P08003 protein
disulfide isomerase A4 precursor (Protein ERp-72, ERp72)
[Mus musculus]
Length = 310
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 96 DESWARDT-DVVHLNGDSFDAILAKAEHALVVFYAPWCGHCKRIKPEFE 239
DE W + D++H N K ++ ++FYA WC + +P F+
Sbjct: 65 DERWLQIALDMIHKN---------KCDYVALLFYASWCPFSRSFRPSFD 104
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 284 AAVDATKEPDLASRFGVKGYPTLKYFNKGEFKFDAGHARQEDQIISFIKD 433
A +++ +P S++GV G+PTL N + R D +++F D
Sbjct: 117 AIKESSIKPSTLSKYGVHGFPTLLLLN-STMRARYRGTRMLDSLVAFYSD 165
>At4g26160.1 68417.m03765 thioredoxin family protein low similarity
to thioredoxin [Ictalurus punctatus] GI:9837585;
contains Pfam profile: PF00085 Thioredoxin
Length = 221
Score = 28.7 bits (61), Expect = 3.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 180 LVVFYAPWCGHCKRIKPEFEKAA 248
+V FY WCG C+ + P+ K A
Sbjct: 117 IVDFYGTWCGSCRAMFPKLCKTA 139
>At1g31020.1 68414.m03798 thioredoxin o (TRXO2) similar to
thioredoxin 2 from Saccharomyces cerevisiae GI:173050,
3'-end of protein contains similarity to thioredoxins;
contains Pfam profile: PF00085 Thioredoxin; identical to
cDNA thioredoxin o (TRXO2) GI:15081458
Length = 159
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = +3
Query: 111 RDTDVVHLNGDSFDAILAKAEHALV--VFY--APWCGHCKRIKPEFEKAATK 254
R + VV + F++ L+KA + VFY A WCG C+ I P + + K
Sbjct: 48 RSSFVVLKSEAEFNSALSKARDGSLPSVFYFTAAWCGPCRLISPVILELSNK 99
>At5g61440.1 68418.m07709 thioredoxin family protein low similarity
to thioredoxin [Callithrix jacchus] GI:13560979;
contains Pfam profile: PF00085 Thioredoxin
Length = 245
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +3
Query: 150 DAILAKAEHALVV-FYAPWCGHCKRIKPE 233
D++L + +V+ FY+P CG CK + P+
Sbjct: 98 DSLLNAGDRLVVLDFYSPGCGGCKSLHPK 126
>At2g17260.1 68415.m01993 glutamate receptor family protein (GLR3.1)
(GLR2) identical to putative glutamate receptor GLR2
[Arabidopsis thaliana] gi|4185740|gb|AAD09174; plant
glutamate receptor family, PMID:11379626
Length = 951
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = +2
Query: 164 KGGTRTGRILRALVWTLQTY*TRVRKSGHKVKTEKINGILA----AVDATKEPDLASRF 328
K R G + + VW T+ + V S + T+ +NG+L D+ K+ D A+R+
Sbjct: 270 KEAERLGMMEKGYVWIATTWLSSVLDSNLPLDTKLVNGVLTLRLHTPDSRKKRDFAARW 328
>At5g18950.1 68418.m02251 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 483
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +2
Query: 512 STFRNTLRKNPNTALSCSTRHGAATCKSTKPD 607
S FRN RKNPNT + T + C+S KPD
Sbjct: 10 SFFRNRTRKNPNTQIRSLTVE-SRDCES-KPD 39
>At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identical
to SP|P29448 Thioredoxin H-type 1 (TRX-H-1) {Arabidopsis
thaliana}
Length = 114
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 180 LVVFYAPWCGHCKRIKPEFEKAATK 254
+V F A WCG C+ I P F A K
Sbjct: 32 VVDFTASWCGPCRFIAPFFADLAKK 56
>At3g06730.1 68416.m00798 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 183
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 180 LVVFYAPWCGHCKRIKPEFEKAATK 254
+V FYA WCG C + E E A +
Sbjct: 98 IVDFYATWCGPCILMAQELEMLAVE 122
>At2g33270.1 68415.m04078 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 273
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 180 LVVFYAPWCGHCKRIKPEFEKAATK 254
+V F++P CG CK + P+ K A K
Sbjct: 117 VVDFFSPSCGGCKALHPKICKIAEK 141
>At1g06970.1 68414.m00742 cation/hydrogen exchanger, putative
(CHX14) monovalent cation:proton antiporter family 2
(CPA2) member, PMID:11500563
Length = 829
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +3
Query: 36 IVEFMRDPVAQPKQKKKDVVDESWARDTDVVHLNGDSFDAILAKAEHAL 182
I +F +++PK ++ + T V+ GDSFD ++ +H L
Sbjct: 698 INDFKNFAMSKPKISYREEIVRDGVETTQVISSLGDSFDLVVVGRDHDL 746
>At4g19010.1 68417.m02802 4-coumarate--CoA ligase family protein /
4-coumaroyl-CoA synthase family protein similar to 4CL
from Pinus taeda, gi:515503, gi:1143308; contains Pfam
AMP-binding enzyme domain PF00501
Length = 566
Score = 27.5 bits (58), Expect = 7.7
Identities = 9/34 (26%), Positives = 19/34 (55%)
Frame = +3
Query: 48 MRDPVAQPKQKKKDVVDESWARDTDVVHLNGDSF 149
M+ + PK + +V++SW R D+ + + D +
Sbjct: 418 MKGYLNNPKATQMSIVEDSWLRTGDIAYFDEDGY 451
>At3g14520.1 68416.m01840 terpene synthase/cyclase family protein
similar to terpene synthase GB:CAA72074 from
[Arabidopsis thaliana]
Length = 605
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +3
Query: 21 NKRQAIVEFMRDPVAQPKQKKKDVVDESWARDTDVVHLNGDSFDAILAKAEHALVVFY 194
NK+ + EFM P+Q ++ +AR DV++ GD + K EH + Y
Sbjct: 543 NKKVVMEEFMNSHDHVPRQVLLRCLN--FARLFDVMYTEGDGYSEPKGKIEHFMTSLY 598
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,839,889
Number of Sequences: 28952
Number of extensions: 234556
Number of successful extensions: 842
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 842
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1275599520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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