Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0872
(708 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 175 4e-44
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 151 7e-37
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 130 8e-31
SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31) 130 1e-30
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 117 8e-27
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 116 1e-26
SB_7588| Best HMM Match : DcpS (HMM E-Value=0) 107 9e-24
SB_57342| Best HMM Match : Arf (HMM E-Value=0) 102 3e-22
SB_32972| Best HMM Match : Arf (HMM E-Value=2.66247e-44) 101 6e-22
SB_18358| Best HMM Match : Arf (HMM E-Value=0) 93 2e-19
SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 2e-14
SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13) 75 4e-14
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 73 2e-13
SB_214| Best HMM Match : Arf (HMM E-Value=0) 71 1e-12
SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 4e-12
SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 4e-10
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05) 46 4e-05
SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_16166| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 40 0.002
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 38 0.006
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 38 0.008
SB_30236| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.024
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.024
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 35 0.074
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 33 0.17
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 33 0.23
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 33 0.30
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 33 0.30
SB_15121| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.30
SB_14105| Best HMM Match : G-alpha (HMM E-Value=0) 32 0.40
SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048) 32 0.40
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 32 0.40
SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.52
SB_8302| Best HMM Match : G-alpha (HMM E-Value=0) 32 0.52
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.92
SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20) 31 0.92
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 31 0.92
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 31 1.2
SB_19345| Best HMM Match : Arf (HMM E-Value=3.3e-05) 31 1.2
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 30 1.6
SB_1913| Best HMM Match : Arf (HMM E-Value=0.015) 30 1.6
SB_59467| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 30 2.1
SB_37006| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-22) 30 2.1
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 29 2.8
SB_23535| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_55766| Best HMM Match : Keratin_B2 (HMM E-Value=1.8) 29 3.7
SB_57168| Best HMM Match : DUF845 (HMM E-Value=4.1) 29 4.9
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 29 4.9
SB_57246| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_48632| Best HMM Match : DUF265 (HMM E-Value=7.6e-22) 28 8.5
SB_27093| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_6137| Best HMM Match : NACHT (HMM E-Value=0.00017) 28 8.5
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 175 bits (425), Expect = 4e-44
Identities = 81/87 (93%), Positives = 84/87 (96%)
Frame = +1
Query: 247 FYWWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLL 426
F WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRER+GEAREEL RML+EDELRDAVLL
Sbjct: 63 FTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEAREELNRMLNEDELRDAVLL 122
Query: 427 IFANKQDLPNAMNAAEITDKLGLHSLR 507
+FANKQDLPNAMNAAEITDKLGLHSLR
Sbjct: 123 VFANKQDLPNAMNAAEITDKLGLHSLR 149
Score = 126 bits (304), Expect = 2e-29
Identities = 61/64 (95%), Positives = 61/64 (95%)
Frame = +2
Query: 62 MGNMFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 241
MG MFA LF GLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1 MGGMFAKLFAGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 242 ISFT 253
ISFT
Sbjct: 61 ISFT 64
Score = 63.7 bits (148), Expect = 1e-10
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = +3
Query: 507 HRNWYIQATCATSGDGLYEGLDWLSNQLKN 596
+R WYIQATCATSGDGLYEGLDWLSN LK+
Sbjct: 150 NRQWYIQATCATSGDGLYEGLDWLSNTLKS 179
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 151 bits (365), Expect = 7e-37
Identities = 66/87 (75%), Positives = 79/87 (90%)
Frame = +1
Query: 247 FYWWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLL 426
F WDVGGQDKIRPLWRHYFQNTQGLI+VVDSNDRER+ E++EEL +ML EDEL+DAV+L
Sbjct: 63 FTVWDVGGQDKIRPLWRHYFQNTQGLIYVVDSNDRERVNESKEELNKMLQEDELKDAVVL 122
Query: 427 IFANKQDLPNAMNAAEITDKLGLHSLR 507
+ ANKQDLPNA++ +EIT+KLGL S+R
Sbjct: 123 VMANKQDLPNALSVSEITEKLGLQSIR 149
Score = 113 bits (272), Expect = 1e-25
Identities = 55/64 (85%), Positives = 59/64 (92%)
Frame = +2
Query: 62 MGNMFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 241
MG ++LF LFGKK+MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVE+VEYKN
Sbjct: 1 MGLTISSLFTRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVESVEYKN 60
Query: 242 ISFT 253
ISFT
Sbjct: 61 ISFT 64
Score = 55.6 bits (128), Expect = 4e-08
Identities = 22/27 (81%), Positives = 23/27 (85%)
Frame = +3
Query: 510 RNWYIQATCATSGDGLYEGLDWLSNQL 590
R WYIQA CAT G GLYEGLDWLSN+L
Sbjct: 151 RQWYIQAACATQGTGLYEGLDWLSNEL 177
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 130 bits (315), Expect = 8e-31
Identities = 58/88 (65%), Positives = 74/88 (84%)
Frame = +1
Query: 247 FYWWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLL 426
F WD+GGQDKIR LWR YFQ TQGLIFVVDSNDR+RI EA+EEL ++L E+EL+ A LL
Sbjct: 136 FTVWDIGGQDKIRLLWRLYFQETQGLIFVVDSNDRDRIQEAKEELFKLLKEEELKRAALL 195
Query: 427 IFANKQDLPNAMNAAEITDKLGLHSLRT 510
+ ANKQDLP++M+ E+++KL LH+LR+
Sbjct: 196 VLANKQDLPDSMSTTELSEKLSLHTLRS 223
Score = 101 bits (242), Expect = 6e-22
Identities = 49/65 (75%), Positives = 53/65 (81%)
Frame = +2
Query: 59 KMGNMFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYK 238
KMGN +LF+ L GK E+R+LMVGLDAAGKTTILY LKL E V TIPTIGFNVE VEYK
Sbjct: 73 KMGNSVLSLFRRLLGKDELRLLMVGLDAAGKTTILYHLKLDEPVNTIPTIGFNVEVVEYK 132
Query: 239 NISFT 253
NI FT
Sbjct: 133 NIKFT 137
Score = 52.4 bits (120), Expect = 3e-07
Identities = 19/28 (67%), Positives = 24/28 (85%)
Frame = +3
Query: 510 RNWYIQATCATSGDGLYEGLDWLSNQLK 593
RNWYIQATCA G G+YEGL+WL+ Q++
Sbjct: 224 RNWYIQATCALKGQGVYEGLEWLAQQIQ 251
>SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31)
Length = 650
Score = 130 bits (313), Expect = 1e-30
Identities = 59/66 (89%), Positives = 62/66 (93%)
Frame = +1
Query: 247 FYWWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLL 426
F WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRER GEA+EEL RML+EDELRDAVLL
Sbjct: 512 FTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERAGEAKEELSRMLAEDELRDAVLL 571
Query: 427 IFANKQ 444
+FANKQ
Sbjct: 572 VFANKQ 577
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +2
Query: 77 ANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTI-PTIGFNVETVEYKNISFT 253
AN + G+ E R + D + ++ + I + P GFNVETVEYKNISFT
Sbjct: 454 ANSYTETEGQTEQRFFALAQDGSRRSRYKGSRQKTHIQAMVSPVQGFNVETVEYKNISFT 513
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 117 bits (282), Expect = 8e-27
Identities = 53/87 (60%), Positives = 68/87 (78%)
Frame = +1
Query: 247 FYWWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLL 426
F WD+GGQDKIR LWR Y+Q QG+IFVVDS DRER EAR EL ++L+E+EL+ +LL
Sbjct: 42 FTVWDIGGQDKIRALWRVYYQGCQGIIFVVDSADRERAEEARNELHKLLAEEELQQVILL 101
Query: 427 IFANKQDLPNAMNAAEITDKLGLHSLR 507
+ ANKQD+ NAM A+EI +KL L+ +R
Sbjct: 102 VIANKQDMANAMTASEIREKLKLNEIR 128
Score = 77.4 bits (182), Expect = 1e-14
Identities = 34/43 (79%), Positives = 40/43 (93%)
Frame = +2
Query: 125 MVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFT 253
M+GLD AGKTTILY+LKL E+V+T+PT+GFNVETV YKNISFT
Sbjct: 1 MIGLDNAGKTTILYRLKLEEVVSTVPTLGFNVETVTYKNISFT 43
Score = 48.4 bits (110), Expect = 6e-06
Identities = 15/29 (51%), Positives = 24/29 (82%)
Frame = +3
Query: 510 RNWYIQATCATSGDGLYEGLDWLSNQLKN 596
R W++Q+ CA G+GL+EGLDW++ Q++N
Sbjct: 130 RPWFVQSACAVKGEGLFEGLDWMATQIRN 158
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 116 bits (280), Expect = 1e-26
Identities = 52/80 (65%), Positives = 63/80 (78%)
Frame = +1
Query: 256 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFA 435
WDVGGQDKIRPLWRHYFQ T+GL+FVVDS+D R+ EA+EEL +L DE RD +++ A
Sbjct: 69 WDVGGQDKIRPLWRHYFQGTEGLLFVVDSSDVLRMPEAKEELHGVLDSDEFRDVPVVVVA 128
Query: 436 NKQDLPNAMNAAEITDKLGL 495
NKQDLPNA+ A E+ LGL
Sbjct: 129 NKQDLPNALKAGEMAKHLGL 148
Score = 78.6 bits (185), Expect = 5e-15
Identities = 37/53 (69%), Positives = 47/53 (88%), Gaps = 1/53 (1%)
Frame = +2
Query: 98 FGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVE-YKNISFT 253
FG +++RI+M+GLDAAGKTTILYKLKL E V+TIPTIGFNVET++ KN++ T
Sbjct: 15 FGNRQVRIVMLGLDAAGKTTILYKLKLKETVSTIPTIGFNVETLQPTKNVTLT 67
Score = 39.1 bits (87), Expect = 0.003
Identities = 13/30 (43%), Positives = 22/30 (73%)
Frame = +3
Query: 516 WYIQATCATSGDGLYEGLDWLSNQLKNANR 605
W++Q CAT+GDGLYE +D + +K+ ++
Sbjct: 156 WHVQEACATNGDGLYEAMDHMVRMVKDFHK 185
>SB_7588| Best HMM Match : DcpS (HMM E-Value=0)
Length = 446
Score = 107 bits (257), Expect = 9e-24
Identities = 46/66 (69%), Positives = 58/66 (87%)
Frame = +1
Query: 259 DVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFAN 438
DVGGQDKIRPLWRHYF +QGLIFVVD DR+RI EAR+EL R++++ E++D ++LIFAN
Sbjct: 143 DVGGQDKIRPLWRHYFAGSQGLIFVVDCADRDRIDEARKELQRIINDREMKDVIILIFAN 202
Query: 439 KQDLPN 456
KQDLP+
Sbjct: 203 KQDLPD 208
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/47 (44%), Positives = 27/47 (57%)
Frame = -1
Query: 399 FAEHPHELFACLADTFPIVTVYYED*TLCILEIMPPQWSDFVLASNI 259
F L + L +T PI T+Y ED L +M PQ +DFVL+SNI
Sbjct: 70 FQARTQGLCSGLINTVPICTIYNEDEALGTGVVMAPQRTDFVLSSNI 116
>SB_57342| Best HMM Match : Arf (HMM E-Value=0)
Length = 457
Score = 102 bits (244), Expect = 3e-22
Identities = 46/84 (54%), Positives = 60/84 (71%)
Frame = +1
Query: 247 FYWWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLL 426
F WD+GGQDKIR LWRHYFQ +G+IFVVDS D+ERI E REEL R+L EL ++
Sbjct: 156 FSVWDIGGQDKIRRLWRHYFQGAEGIIFVVDSADKERIFEVREELTRVLQHSELNGVPVV 215
Query: 427 IFANKQDLPNAMNAAEITDKLGLH 498
+ ANKQDL A+ ++ ++L L+
Sbjct: 216 VVANKQDLLGAIGPDKMAEELSLY 239
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/36 (66%), Positives = 29/36 (80%), Gaps = 1/36 (2%)
Frame = +2
Query: 149 KTTILYKLKLGEIVTTIPTIGFNVETVE-YKNISFT 253
KTTILYKLKL E V T+PT+ FNVET+ KNI+F+
Sbjct: 122 KTTILYKLKLKETVNTVPTVAFNVETISPCKNITFS 157
Score = 37.1 bits (82), Expect = 0.014
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +3
Query: 516 WYIQATCATSGDGLYEGLDWLS 581
W IQ TCAT+GDGLYE ++ L+
Sbjct: 246 WRIQGTCATAGDGLYEAMEALA 267
>SB_32972| Best HMM Match : Arf (HMM E-Value=2.66247e-44)
Length = 257
Score = 101 bits (242), Expect = 6e-22
Identities = 43/85 (50%), Positives = 67/85 (78%)
Frame = +1
Query: 262 VGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANK 441
+ GQ IRP WR Y+ NT +I+VVDS D++RIG +++EL+ ML EDEL+ A+L++FANK
Sbjct: 153 IPGQTSIRPYWRCYYANTDAVIYVVDSVDKDRIGISKQELLAMLEEDELKKAILIVFANK 212
Query: 442 QDLPNAMNAAEITDKLGLHSLRTVT 516
QD+ AM+++E+++ LGL +L++ T
Sbjct: 213 QDMEGAMSSSEVSNALGLSALKSRT 237
>SB_18358| Best HMM Match : Arf (HMM E-Value=0)
Length = 214
Score = 93.1 bits (221), Expect = 2e-19
Identities = 42/86 (48%), Positives = 58/86 (67%)
Frame = +1
Query: 247 FYWWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLL 426
F WD+GG+++ RPLW+ Y + T +I+VVDS ++ EAR+EL +L+ +L A +L
Sbjct: 68 FKVWDIGGREQNRPLWKAYARQTDAVIYVVDSTSAGKLEEARDELFNLLNSAQLNGAPIL 127
Query: 427 IFANKQDLPNAMNAAEITDKLGLHSL 504
IFANKQD PNA+ EIT L LH L
Sbjct: 128 IFANKQDCPNAIPPREITHMLSLHDL 153
Score = 59.3 bits (137), Expect = 3e-09
Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
Frame = +2
Query: 62 MGNMFANLFKG----LFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETV 229
MGNMF F+ L K+ ++M+GLD +GKT+ILY+ K E V T+PT FNVET+
Sbjct: 1 MGNMFVVSFRRFRPMLKLKRPFHVVMLGLDKSGKTSILYRNKFREYVNTVPTTAFNVETI 60
Query: 230 E-YKNISF 250
+K I F
Sbjct: 61 RPFKGIRF 68
>SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 76.6 bits (180), Expect = 2e-14
Identities = 33/81 (40%), Positives = 52/81 (64%)
Frame = +1
Query: 256 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFA 435
W++GG +K R W ++ +TQ L++VVDS+D +R E+R+ L +LS L +L+ A
Sbjct: 218 WEIGGDEKYRAYWPNFIADTQLLVYVVDSSDPDRFNESRDNLKSLLSNSLLNGVPVLLVA 277
Query: 436 NKQDLPNAMNAAEITDKLGLH 498
+KQDLP A +EI LG++
Sbjct: 278 SKQDLPGARQLSEIVSVLGIN 298
Score = 31.5 bits (68), Expect = 0.69
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = +2
Query: 110 EMRILMVGLDAAGKTTILYKLKLGEI---VTTIPTIGFNV 220
E RIL++GLD +GK+ L L G+ +T T GFNV
Sbjct: 166 EKRILVLGLDGSGKSVFLSALSQGDSSKRPSTTKTEGFNV 205
>SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13)
Length = 334
Score = 75.4 bits (177), Expect = 4e-14
Identities = 39/88 (44%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Frame = +1
Query: 247 FYWWDVGGQDKIRPLWRHYFQNTQ-GLIFVVDSNDRERIGEAREELMRMLSEDELRDAVL 423
F WD+GGQ +R +HYF + + GLI+VVDS D +R+ EA +L+ +L E + D +
Sbjct: 20 FAVWDIGGQPNLR---KHYFTDDKSGLIYVVDSTDIQRLNEA--QLLGILQEKVMVDVPV 74
Query: 424 LIFANKQDLPNAMNAAEITDKLGLHSLR 507
++ ANKQDLPN + A +I + LGL L+
Sbjct: 75 VVVANKQDLPNVLKAGDIAEHLGLLKLK 102
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 72.9 bits (171), Expect = 2e-13
Identities = 26/84 (30%), Positives = 54/84 (64%)
Frame = +1
Query: 256 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFA 435
WD+GGQ + R +W Y + ++++VD+ D +++ ++ EL +L + +L +L+
Sbjct: 70 WDIGGQPRFRSMWERYCRGVNCIVYMVDAADHDKLEASKNELHNLLEKPQLAGIPILVLG 129
Query: 436 NKQDLPNAMNAAEITDKLGLHSLR 507
NK+DLPN+++ E+ ++L L S++
Sbjct: 130 NKKDLPNSLDEKELVERLNLTSVQ 153
Score = 47.6 bits (108), Expect = 1e-05
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = +2
Query: 86 FKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEI-VTTIPTIGFNVETVEYKNIS 247
FK LF K+EM + +VGL +GKTT + + G+ IPT+GFN+ V N++
Sbjct: 12 FKSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVSKGNVT 66
>SB_214| Best HMM Match : Arf (HMM E-Value=0)
Length = 148
Score = 70.5 bits (165), Expect = 1e-12
Identities = 31/92 (33%), Positives = 53/92 (57%)
Frame = +1
Query: 247 FYWWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLL 426
F +D+GG + R +W+ YF G++F++D D ER+ E+++EL +L++++L +L
Sbjct: 22 FTTFDLGGHRQARRIWKDYFPAVNGIVFIIDCADFERLAESKKELDSLLADEQLSSCPVL 81
Query: 427 IFANKQDLPNAMNAAEITDKLGLHSLRTVTGT 522
I NK D+P A+ I GL T G+
Sbjct: 82 ILGNKIDIPGAVGEDYIRQNFGLFGQTTGKGS 113
>SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1325
Score = 68.9 bits (161), Expect = 4e-12
Identities = 38/85 (44%), Positives = 51/85 (60%)
Frame = +1
Query: 256 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFA 435
WD+GGQ KIRP W++YF+NT L EL +L E++L LL+FA
Sbjct: 67 WDIGGQRKIRPYWKNYFENTDIL-----------------ELDELLEEEKLIGVPLLVFA 109
Query: 436 NKQDLPNAMNAAEITDKLGLHSLRT 510
NKQDL NA AEI+ LGL+++R+
Sbjct: 110 NKQDLMNAATPAEISSNLGLNTIRS 134
Score = 49.2 bits (112), Expect = 3e-06
Identities = 22/44 (50%), Positives = 33/44 (75%)
Frame = +2
Query: 107 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYK 238
+EMRIL++GLD +GKTTIL L +++ PT GFN+++V+ K
Sbjct: 16 REMRILLLGLDNSGKTTILKSLASEDVLHITPTQGFNIKSVQSK 59
>SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 62.1 bits (144), Expect = 4e-10
Identities = 25/49 (51%), Positives = 36/49 (73%)
Frame = +1
Query: 256 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSED 402
WDVGGQ +R WR+YF++T GLI+VVDS D+ R+ + + EL +L E+
Sbjct: 7 WDVGGQRSLRSYWRNYFESTDGLIWVVDSADQRRLADCKMELQGLLVEE 55
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +1
Query: 256 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFA 435
WD GQ++ R L Y++ QG+I V D+N RE + E L + +D V ++
Sbjct: 62 WDTAGQERFRTLTPSYYRGAQGVILVYDTNSRETFDKLEEWLNEVEMYSTKKDIVKMLVG 121
Query: 436 NKQD 447
NK D
Sbjct: 122 NKID 125
>SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05)
Length = 259
Score = 45.6 bits (103), Expect = 4e-05
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +1
Query: 247 FYWWDVGGQDKIRPLWRHYFQNTQ 318
F WDVGG K+RPLWRHY+ NTQ
Sbjct: 235 FTIWDVGGLQKLRPLWRHYYLNTQ 258
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +2
Query: 167 KLKLGEIVTTIPTIGFNVETVEYKNISFT 253
K+++ + + GFNVETVE++++ FT
Sbjct: 208 KMEMRAVALGLDGAGFNVETVEHRSLKFT 236
>SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 42.7 bits (96), Expect = 3e-04
Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 12/89 (13%)
Frame = +2
Query: 56 FKMGNMFANLFKGLFGKKEMRILMVGLDAAGKTTIL--YKLKLGEIVTTIP------TIG 211
F+M + + L+K LF K E IL++GLD AGKTT+L K K + IP T+G
Sbjct: 3 FEMFTLLSGLWKYLFQKDEYFILILGLDNAGKTTLLEQIKRKFCKTYNGIPFEKITTTVG 62
Query: 212 FNVE--TVEYKNISF--TGGMLEAKTKSD 286
N+ T+ + + F GG E +T D
Sbjct: 63 LNIGKITISHVKLMFWDLGGQQELRTLWD 91
>SB_16166| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/48 (39%), Positives = 34/48 (70%)
Frame = +1
Query: 364 EAREELMRMLSEDELRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLR 507
E + +L+ +++ EL+ A LLI ANKQD+ +M+ AEI+++L L ++
Sbjct: 34 ENKFQLVAIIAICELKQAALLILANKQDIKGSMSVAEISEQLNLACIK 81
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 39.9 bits (89), Expect = 0.002
Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 7/121 (5%)
Frame = +1
Query: 256 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFA 435
WD GQ++ R L Y+++ G++ + D N+ E + + +SE ++
Sbjct: 62 WDTAGQERFRTLTTAYYRSAHGIVLIYDVNESETFLHL-SQWLEEVSEYACEGVNTILVG 120
Query: 436 NKQDLPNAM-----NAAEITDKLGLHSLRTVTGTSKRHAPLPETDCT--RVSTGSPISSR 594
NK DL + A E +KL + + T S + T + GSP++S
Sbjct: 121 NKCDLIDCRQVGYNTAKEFAEKLDISFIETSAKDSTNVESVFRTMAAELKAKLGSPLTSP 180
Query: 595 T 597
T
Sbjct: 181 T 181
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 5/90 (5%)
Frame = +1
Query: 256 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFA 435
WD GQ++ R + Y++ G+I V D D+E ++ L + + L+
Sbjct: 83 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQE-IDRYACENVNKLLVG 141
Query: 436 NKQDLP-----NAMNAAEITDKLGLHSLRT 510
NK DL + A E + LG+ L T
Sbjct: 142 NKCDLTTKKVVDFTTAKEYAESLGVPFLET 171
>SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 765
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 10/78 (12%)
Frame = +1
Query: 247 FYWWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAV-- 420
F +DVGGQ R W H F+ +IF V + + + EE+ RM+ +L D++
Sbjct: 196 FKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSAYDLVLAEDEEMNRMMESMKLFDSICN 255
Query: 421 --------LLIFANKQDL 450
+++F NK+DL
Sbjct: 256 NKWFTDTSIILFLNKKDL 273
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = +1
Query: 256 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFA 435
WD GQ+K R + + Y++N +I V D +R + LM + ++ + ++
Sbjct: 65 WDTAGQEKFRGITQSYYRNADAVILVFDITNRGTFASIPQWLMNVQKYTN-KNILKVLVG 123
Query: 436 NKQDLPNA 459
NK DL A
Sbjct: 124 NKTDLKGA 131
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/65 (26%), Positives = 33/65 (50%)
Frame = +1
Query: 256 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFA 435
WD GQ++ R + + Y+ N G+I D +++ E+ + + + +D ++ I
Sbjct: 61 WDTAGQERFRSITQSYYHNADGVIVTYDITNKKSF-ESLPQWLDDTNRYTSKDVLIAIVG 119
Query: 436 NKQDL 450
NK DL
Sbjct: 120 NKSDL 124
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/67 (25%), Positives = 31/67 (46%)
Frame = +1
Query: 256 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFA 435
WD GQ++ R + Y++ T G+I V D + + L + + D + ++
Sbjct: 31 WDTAGQERFRTITSTYYRGTHGVIVVYDVTSADTFVNVKRWLHEI--DQNCDDVIRILVG 88
Query: 436 NKQDLPN 456
NK D P+
Sbjct: 89 NKDDCPS 95
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 37.9 bits (84), Expect = 0.008
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +1
Query: 256 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREEL--MRMLSEDELRDAVLLI 429
WD GQ++ R + R Y++ G + V D + RE L R L+ + V+++
Sbjct: 149 WDTAGQERFRSVTRSYYRGAAGALLVYDISSRETFNSLTNWLTDARTLASPNI---VIIL 205
Query: 430 FANKQDL 450
NK+DL
Sbjct: 206 VGNKKDL 212
>SB_30236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 353
Score = 36.3 bits (80), Expect = 0.024
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 10/74 (13%)
Frame = +1
Query: 259 DVGGQDKIRPLWRHYFQNTQGLIF----------VVDSNDRERIGEAREELMRMLSEDEL 408
DVGGQ R W H F+N ++F +V+S+ R+ E++ +++
Sbjct: 199 DVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDSENRMEESKALFRTIITYPWF 258
Query: 409 RDAVLLIFANKQDL 450
+++ +++F NK+DL
Sbjct: 259 QNSSIILFLNKKDL 272
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 36.3 bits (80), Expect = 0.024
Identities = 17/64 (26%), Positives = 34/64 (53%)
Frame = +1
Query: 256 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFA 435
WD GQ++ R L Y ++++ + V D + E+ + ++M+ ++ AV++I
Sbjct: 217 WDTAGQERFRCLIHSYIRDSEAALIVFDITNYTSF-ESVGDWVKMVRDERGEKAVIIIVG 275
Query: 436 NKQD 447
NK D
Sbjct: 276 NKMD 279
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 34.7 bits (76), Expect = 0.074
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = +1
Query: 220 GDSRIQKH*FYWWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSE 399
GD RI+ WD GQ++ R + Y++NT G + + D +R+ +
Sbjct: 59 GDVRIK---LQIWDTAGQERFRSITYSYYRNTVGCLIIYDITNRDSFVNVMDWYKEAKQC 115
Query: 400 DELRDAVLLIFANKQD 447
E + V ++ +K D
Sbjct: 116 VEEAEVVFMLVGHKID 131
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/68 (26%), Positives = 31/68 (45%)
Frame = +1
Query: 247 FYWWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLL 426
F WD GQ++ L Y++ Q I V D +++ A+ ++ L + V+
Sbjct: 72 FEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFARAK-TWVKELQRQASPNIVIA 130
Query: 427 IFANKQDL 450
+ NK DL
Sbjct: 131 LSGNKADL 138
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 33.1 bits (72), Expect = 0.23
Identities = 15/65 (23%), Positives = 27/65 (41%)
Frame = +1
Query: 256 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFA 435
WD GQ++ R + + YF+ G++ D + + M + E ++
Sbjct: 950 WDTAGQERFRSITKQYFRKADGILIFYDVTAESSFTNLK-KWMVSVEEGAEEGVAKMVLG 1008
Query: 436 NKQDL 450
NK DL
Sbjct: 1009 NKTDL 1013
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 32.7 bits (71), Expect = 0.30
Identities = 16/65 (24%), Positives = 30/65 (46%)
Frame = +1
Query: 256 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFA 435
WD GQ++ R + Y++ G + V D ++ + L+ + + V+L+
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGAVLVYDLTKQKTFQDVERWLLEVREHADPTIVVMLV-G 124
Query: 436 NKQDL 450
NK DL
Sbjct: 125 NKCDL 129
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 32.7 bits (71), Expect = 0.30
Identities = 16/75 (21%), Positives = 34/75 (45%)
Frame = +1
Query: 256 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFA 435
WD GQ++ R + + YF+ G++ + D + R + + + E + +++
Sbjct: 496 WDTAGQERFRSIAKSYFRKADGVLLLYDVTCETSFLDVR-DWVEAIEESCSKPVPIMLCG 554
Query: 436 NKQDLPNAMNAAEIT 480
NK D+ + A T
Sbjct: 555 NKIDIRQSAAAENKT 569
>SB_15121| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 378
Score = 32.7 bits (71), Expect = 0.30
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Frame = -1
Query: 279 FVLASNIPPVKLMFLYSTVSTLKPIVGIVVTISPNLSLYRIVV--LPAASKPTINILISF 106
F L + P +++ Y + TL+P++ IV+ + L + RIV+ LP P + I+I +
Sbjct: 223 FYLPTLRPVMRIAIFY--LPTLRPVMRIVIYLPTLLPVMRIVIFYLPTL-LPVMRIVICY 279
Query: 105 LP-KRPLNKFANIFPIL 58
LP RP+ + P L
Sbjct: 280 LPILRPVMRIVIYLPTL 296
>SB_14105| Best HMM Match : G-alpha (HMM E-Value=0)
Length = 320
Score = 32.3 bits (70), Expect = 0.40
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 10/76 (13%)
Frame = +1
Query: 259 DVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAV------ 420
DVGGQ R W H+F ++F + + E E+ ML +L + +
Sbjct: 168 DVGGQKNQRKKWIHFFDGVTAVVFFASLSSYDEQLEEEEDTNAMLDSLDLFEEITHCEFL 227
Query: 421 ----LLIFANKQDLPN 456
++F NK DL N
Sbjct: 228 ANTQFILFLNKLDLFN 243
>SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048)
Length = 472
Score = 32.3 bits (70), Expect = 0.40
Identities = 16/67 (23%), Positives = 35/67 (52%)
Frame = +1
Query: 256 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFA 435
WD G ++ L R+++ N++ ++ V + + + + +E ++ A +++ A
Sbjct: 4 WDTLGMEEYESLTRNHYSNSKVVLVVYSLDLPDSLAQVKE--CTQSAQVNAPAAKIVLVA 61
Query: 436 NKQDLPN 456
NK DLPN
Sbjct: 62 NKMDLPN 68
>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
Length = 159
Score = 32.3 bits (70), Expect = 0.40
Identities = 16/67 (23%), Positives = 35/67 (52%)
Frame = +1
Query: 256 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFA 435
WD G ++ L R+++ N++ ++ V + + + + +E ++ A +++ A
Sbjct: 63 WDTLGMEEYESLTRNHYSNSKVVLVVYSLDLPDSLAQVKE--CTQSAQVNAPAAKIVLVA 120
Query: 436 NKQDLPN 456
NK DLPN
Sbjct: 121 NKMDLPN 127
>SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1117
Score = 31.9 bits (69), Expect = 0.52
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 10/78 (12%)
Frame = +1
Query: 247 FYWWDVGGQDKIRPLWRHYFQNTQGLIFVV----------DSNDRERIGEAREELMRMLS 396
F +DVGGQ R W H F++ +I+ V + R+ E+ + +++
Sbjct: 245 FKLFDVGGQRSERKKWIHCFEDVTAIIYCVALSAYDLTLEEDESTNRMEESLKLFESIIN 304
Query: 397 EDELRDAVLLIFANKQDL 450
D +++F NK+DL
Sbjct: 305 NKWFVDTSVILFLNKKDL 322
>SB_8302| Best HMM Match : G-alpha (HMM E-Value=0)
Length = 315
Score = 31.9 bits (69), Expect = 0.52
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 10/78 (12%)
Frame = +1
Query: 247 FYWWDVGGQDKIRPLWRHYFQNTQGLIFVV----------DSNDRERIGEAREELMRMLS 396
F +DVGGQ R W H F++ +I+ V + R+ E+ + +++
Sbjct: 197 FKLFDVGGQRSERKKWIHCFEDVTAIIYCVALSAYDLSLEEDESTNRMEESLKLFESIIN 256
Query: 397 EDELRDAVLLIFANKQDL 450
D +++F NK+DL
Sbjct: 257 NKWFVDTSVILFLNKKDL 274
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 31.1 bits (67), Expect = 0.92
Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Frame = +1
Query: 256 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEA---REELMRMLSEDELRDAVLL 426
W + GQ++ + R Y++ + + D + + A +++L + +
Sbjct: 73 WLIAGQERFSSMTRVYYKGADACVVLFDLERQTTLDGAIKWKKDLDSKYKLHSRKPVPCI 132
Query: 427 IFANKQDLPNAMNAAEITDKL 489
+ NK DLP+ EI DKL
Sbjct: 133 LVGNKSDLPDRPVDKEIIDKL 153
>SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20)
Length = 1243
Score = 31.1 bits (67), Expect = 0.92
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +2
Query: 113 MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVE 223
M++++VG+ GKTT+L LK + + + T+G V+
Sbjct: 667 MKLMVVGIQGYGKTTLLAALKGQPLPSNLSTVGIVVD 703
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 31.1 bits (67), Expect = 0.92
Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +1
Query: 256 WDVGGQDKIRPLWRHYFQNTQGLIFVVD---SNDRERIGEAREELMRMLSEDELRDAVLL 426
WD GQ++ R + + Y+++ G+I D + + + E++ + E +A+ L
Sbjct: 100 WDTAGQERFRTITQSYYRSCNGVIIAYDITKCDTFKNVIRWGEDVQKYAPE----NAIKL 155
Query: 427 IFANKQDL 450
+ NK+DL
Sbjct: 156 LVGNKKDL 163
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/65 (18%), Positives = 29/65 (44%)
Frame = +1
Query: 256 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFA 435
WD GQ++ + Y++ G++ V D + + + ++ + + D ++
Sbjct: 10 WDTAGQERFHTITTAYYRGAMGIMLVYDVTNEKSFSNI-SKWLKKIDDHANEDVKRMLVG 68
Query: 436 NKQDL 450
NK D+
Sbjct: 69 NKCDM 73
>SB_19345| Best HMM Match : Arf (HMM E-Value=3.3e-05)
Length = 222
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 507 HRNWYIQATCATSGDGLYEGLDWLSNQL 590
+R W + C + DGL EG+ WL Q+
Sbjct: 194 NRPWQVNMMCVENLDGLLEGMTWLLKQV 221
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +1
Query: 307 QNTQGLIFVVDSN-DRERIGEAREELMRML--SEDELRDAVLLIFANKQDLPNAMNAAEI 477
QN I+VVDS+ + +R+ +EL M+ S+ + R +L++ A ++ +
Sbjct: 125 QNVDAFIYVVDSSAESQRVNIGDKELQAMMNNSKSQPRQPLLVLSAVATQDTLPLSCVRV 184
Query: 478 TDKLGLHSL 504
TD L ++ L
Sbjct: 185 TDMLQMNKL 193
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = +1
Query: 256 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRM 390
WD GQ++ R L +F++ G + V D + R L ++
Sbjct: 171 WDTAGQERFRSLTTAFFRDAMGFLLVFDLTHEQSFVNIRNWLSQL 215
>SB_1913| Best HMM Match : Arf (HMM E-Value=0.015)
Length = 777
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/29 (41%), Positives = 22/29 (75%)
Frame = +1
Query: 421 LLIFANKQDLPNAMNAAEITDKLGLHSLR 507
+L FANK DL +A+++ + T+ LGL +++
Sbjct: 54 VLFFANKMDLRDALSSIKCTNLLGLEAIK 82
>SB_59467| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 864
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +1
Query: 529 RHAPLPETDCTR--VSTGSPISSRTPTANRMCANSQTNLIIERDYGLRYVN 675
+ +P+ ET+ R VS SP+S +P R + + L YG +Y N
Sbjct: 606 QRSPIRETEAQRSPVSQRSPVSQNSPVPQRSPTSKHSPLSQRHSYGSQYSN 656
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/76 (22%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +1
Query: 256 WDVGGQDKIRPLWRHYFQNTQGLIFVVD---SNDRERIGEAREELMRMLSEDELRDAVLL 426
WD GQ++ + L +++ + V D N + + R+E + S + + +
Sbjct: 2 WDTAGQERFQSLGVAFYRGADCCVLVFDVTQPNSFKTLDSWRDEFLIQASPRDPENFPFV 61
Query: 427 IFANKQDLPNAMNAAE 474
+ NK DL N +A+
Sbjct: 62 VLGNKIDLENRAVSAK 77
>SB_37006| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-22)
Length = 407
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -1
Query: 246 LMFLYSTVSTLKPIVGIVVTISPNLSLYRIVVLPAASKPTINIL 115
L LY ++PI IV + L LY I+ PA KP+ +L
Sbjct: 71 LRTLYIVNCVIQPIFAIVAVSTNTLVLYAIIKTPALHKPSTVLL 114
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +2
Query: 101 GKKEMRILMVGLDAAGKTTILYKLKL 178
G M++++VG +A GKTT++++L L
Sbjct: 548 GYYSMKLMLVGREAQGKTTLMHRLML 573
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 29.5 bits (63), Expect = 2.8
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +1
Query: 256 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRE 354
WD GQ++ R + Y++ G I + D + E
Sbjct: 75 WDTAGQERYRTITTAYYRGAMGFILMYDITNEE 107
>SB_23535| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 222
Score = 29.1 bits (62), Expect = 3.7
Identities = 27/108 (25%), Positives = 44/108 (40%), Gaps = 7/108 (6%)
Frame = +1
Query: 331 VVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANKQDL----PNAMNAAEITDKLGLH 498
V++ RERI + EEL R++ E + RD K D+ + + K G +
Sbjct: 27 VMEKRRRERINRSLEELKRLVLEAQHRDCSRYTKLEKADILEMTVKHLRTLQSQQKTGCN 86
Query: 499 SLRTVTGTS---KRHAPLPETDCTRVSTGSPISSRTPTANRMCANSQT 633
T P+P T TR + PI ++P+ + N+ T
Sbjct: 87 GCAVTEVTQFMVPGQHPMPGTYTTRPGS-FPIQLQSPSGDNTERNTST 133
>SB_55766| Best HMM Match : Keratin_B2 (HMM E-Value=1.8)
Length = 245
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +1
Query: 451 PNAMNAAEITDKLGLHSLRTVTGTSK-RHAPL--PETDCTRVSTGSPISSRTPTAN 609
P N+ I++ + S T +G+ +P+ P T+C +GSP +S +PT N
Sbjct: 186 PTTSNSPNISNGPTISSSPTTSGSPTISDSPISRPVTNCKPAISGSPTTSNSPTQN 241
>SB_57168| Best HMM Match : DUF845 (HMM E-Value=4.1)
Length = 132
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 319 GLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLI 429
G++FVVD+++RER+ E R L + LLI
Sbjct: 38 GVVFVVDASNRERMDECRSILHETKQNPRVSGKPLLI 74
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 28.7 bits (61), Expect = 4.9
Identities = 18/67 (26%), Positives = 28/67 (41%)
Frame = +1
Query: 247 FYWWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLL 426
F WD GQ++ + L Y+++ I V D R +R L +D V+
Sbjct: 11 FNIWDTAGQERFKSLAPLYYRDAAAAILVYDITIESTFHSLR-PWIRELQRYGPQDIVIA 69
Query: 427 IFANKQD 447
+ NK D
Sbjct: 70 VAGNKCD 76
>SB_57246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 737
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -1
Query: 180 PNLSLYRIVVLPAASKPTINILIS-FLPKRPLNKFANIFPILNYY 49
P+ +L + + P S TI L+S +LP +PL + I +LN+Y
Sbjct: 455 PSNALKCLDIHPLPSSSTITFLLSHYLPPQPLPSSSAITFLLNHY 499
>SB_48632| Best HMM Match : DUF265 (HMM E-Value=7.6e-22)
Length = 455
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 119 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETV 229
+L+ G GKTT+ K+K +PT GF E +
Sbjct: 54 VLLTGPPGIGKTTLCSKVKQALASRGVPTQGFYTEEI 90
>SB_27093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 683
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +2
Query: 110 EMRILMVGLDAAGKTTILYKLKLGEI 187
E RI +VG + +GKTT+L K+ LGE+
Sbjct: 364 ESRIAVVGDNGSGKTTLL-KILLGEL 388
>SB_6137| Best HMM Match : NACHT (HMM E-Value=0.00017)
Length = 1243
Score = 27.9 bits (59), Expect = 8.5
Identities = 21/100 (21%), Positives = 40/100 (40%), Gaps = 1/100 (1%)
Frame = +1
Query: 391 LSEDELRDAVLLIFANKQDLPNAMNAAEIT-DKLGLHSLRTVTGTSKRHAPLPETDCTRV 567
LS +++ D + AN + + ++T + +G + + ++ L E D
Sbjct: 1109 LSFNQIGDEGAIAIANALKTNSTLKILDLTKNNIGNEGAKAIAEALMTNSTLKEFDLCDT 1168
Query: 568 STGSPISSRTPTANRMCANSQTNLIIERDYGLRYVNLFAI 687
+ G AN + NS + DYG+R V A+
Sbjct: 1169 NIGD--EGAIAIANALMTNSTLKKLYLHDYGIRAVGAAAL 1206
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,337,287
Number of Sequences: 59808
Number of extensions: 484645
Number of successful extensions: 1187
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 1065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1182
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1865706635
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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