Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0871
(681 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 131 5e-31
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 131 5e-31
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 131 5e-31
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 99 3e-21
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 99 3e-21
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 42 4e-04
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 40 0.001
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 39 0.004
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 39 0.004
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 39 0.004
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 38 0.005
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 38 0.009
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 37 0.015
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 37 0.015
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 36 0.027
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 33 0.14
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 33 0.14
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 33 0.25
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 33 0.25
Z81016-6|CAB02667.1| 1573|Caenorhabditis elegans Hypothetical pr... 33 0.25
Z48621-13|CAA88549.1| 1573|Caenorhabditis elegans Hypothetical p... 33 0.25
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 30 1.3
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 29 3.1
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 4.1
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 4.1
AF039049-1|AAB94253.1| 299|Caenorhabditis elegans Serpentine re... 28 5.4
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 7.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 7.1
AL132860-11|CAB60517.1| 440|Caenorhabditis elegans Hypothetical... 28 7.1
AF069986-1|AAC39136.1| 440|Caenorhabditis elegans nitrilase and... 28 7.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 7.1
AF040642-3|AAN73872.2| 502|Caenorhabditis elegans Hypothetical ... 28 7.1
Z82078-2|CAD54160.1| 714|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z82078-1|CAB04944.2| 707|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z72502-8|CAD44097.1| 374|Caenorhabditis elegans Hypothetical pr... 27 9.4
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 131 bits (316), Expect = 5e-31
Identities = 57/82 (69%), Positives = 67/82 (81%)
Frame = +3
Query: 261 KQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGIT 440
K +F+R KPH NVGTIGHVDHGKTTLT+AITK+L+ A+ + Y DIDNAPEEKARGIT
Sbjct: 40 KAVFKRDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGIT 99
Query: 441 INVAHVEYQTEQRHYGHTDCPG 506
IN H+EY+T +RHY H DCPG
Sbjct: 100 INAFHLEYETAKRHYAHIDCPG 121
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +2
Query: 500 PRSADYIKNMITGTAQMDGAILVVAATDG 586
P ADYIKNMITG AQM+GAILVVAATDG
Sbjct: 120 PGHADYIKNMITGAAQMEGAILVVAATDG 148
Score = 31.9 bits (69), Expect = 0.44
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +1
Query: 589 MPQTREHLLLXQQIGI 636
MPQTREHLLL +Q+G+
Sbjct: 150 MPQTREHLLLARQVGV 165
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 131 bits (316), Expect = 5e-31
Identities = 57/82 (69%), Positives = 67/82 (81%)
Frame = +3
Query: 261 KQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGIT 440
K +F+R KPH NVGTIGHVDHGKTTLT+AITK+L+ A+ + Y DIDNAPEEKARGIT
Sbjct: 41 KAVFKRDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGIT 100
Query: 441 INVAHVEYQTEQRHYGHTDCPG 506
IN H+EY+T +RHY H DCPG
Sbjct: 101 INAFHLEYETAKRHYAHIDCPG 122
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +2
Query: 500 PRSADYIKNMITGTAQMDGAILVVAATDG 586
P ADYIKNMITG AQM+GAILVVAATDG
Sbjct: 121 PGHADYIKNMITGAAQMEGAILVVAATDG 149
Score = 31.9 bits (69), Expect = 0.44
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +1
Query: 589 MPQTREHLLLXQQIGI 636
MPQTREHLLL +Q+G+
Sbjct: 151 MPQTREHLLLARQVGV 166
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 131 bits (316), Expect = 5e-31
Identities = 57/82 (69%), Positives = 67/82 (81%)
Frame = +3
Query: 261 KQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGIT 440
K +F+R KPH NVGTIGHVDHGKTTLT+AITK+L+ A+ + Y DIDNAPEEKARGIT
Sbjct: 41 KAVFKRDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGIT 100
Query: 441 INVAHVEYQTEQRHYGHTDCPG 506
IN H+EY+T +RHY H DCPG
Sbjct: 101 INAFHLEYETAKRHYAHIDCPG 122
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +2
Query: 500 PRSADYIKNMITGTAQMDGAILVVAATDG 586
P ADYIKNMITG AQM+GAILVVAATDG
Sbjct: 121 PGHADYIKNMITGAAQMEGAILVVAATDG 149
Score = 31.9 bits (69), Expect = 0.44
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +1
Query: 589 MPQTREHLLLXQQIGI 636
MPQTREHLLL +Q+G+
Sbjct: 151 MPQTREHLLLARQVGV 166
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 99.1 bits (236), Expect = 3e-21
Identities = 44/75 (58%), Positives = 55/75 (73%)
Frame = +3
Query: 282 KPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVE 461
K + NVGTIGH+DHGKTTLT+AIT+V + A+ + +ID EEK RGITINVAH+
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHIKFDEIDKGKEEKKRGITINVAHIG 102
Query: 462 YQTEQRHYGHTDCPG 506
Y++ R Y HTDCPG
Sbjct: 103 YESPLRRYSHTDCPG 117
Score = 48.0 bits (109), Expect = 6e-06
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +2
Query: 500 PRSADYIKNMITGTAQMDGAILVVAATDGV 589
P +D+IKNMI GT+QMD A+LV+AATDGV
Sbjct: 116 PGHSDFIKNMICGTSQMDVAVLVIAATDGV 145
Score = 29.1 bits (62), Expect = 3.1
Identities = 9/21 (42%), Positives = 18/21 (85%)
Frame = +1
Query: 589 MPQTREHLLLXQQIGIQHVVV 651
M QT+EHL+L +Q+G++++ +
Sbjct: 146 MEQTKEHLILAKQVGVKNMAI 166
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 99.1 bits (236), Expect = 3e-21
Identities = 44/75 (58%), Positives = 55/75 (73%)
Frame = +3
Query: 282 KPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVE 461
K + NVGTIGH+DHGKTTLT+AIT+V + A+ + +ID EEK RGITINVAH+
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHIKFDEIDKGKEEKKRGITINVAHIG 102
Query: 462 YQTEQRHYGHTDCPG 506
Y++ R Y HTDCPG
Sbjct: 103 YESPLRRYSHTDCPG 117
Score = 48.0 bits (109), Expect = 6e-06
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +2
Query: 500 PRSADYIKNMITGTAQMDGAILVVAATDGV 589
P +D+IKNMI GT+QMD A+LV+AATDGV
Sbjct: 116 PGHSDFIKNMICGTSQMDVAVLVIAATDGV 145
Score = 29.1 bits (62), Expect = 3.1
Identities = 9/21 (42%), Positives = 18/21 (85%)
Frame = +1
Query: 589 MPQTREHLLLXQQIGIQHVVV 651
M QT+EHL+L +Q+G++++ +
Sbjct: 146 MEQTKEHLILAKQVGVKNMAI 166
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 43.2 bits (97), Expect = 2e-04
Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 23/135 (17%)
Frame = +3
Query: 171 EAKPVCKCTKHNSPVRIDSIKYNTQETLAEKQIFERT--------KPHCNVGTIGHVDHG 326
E+ PV + +P + + + + LA+K F+RT K H N+ +GHVD G
Sbjct: 64 ESAPVAPVSATEAPKKEPTPEEDLVAPLAKK--FQRTVYVDDGTHKEHINMVFVGHVDAG 121
Query: 327 KTTLTAAI---TKVLSDLNL------AQKKGYAD------IDNAPEEKARGITINVAHVE 461
K+T+ + T ++ L A++KG +D EE+ +G T+ V
Sbjct: 122 KSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMDTNDEEREKGKTVEVGRAY 181
Query: 462 YQTEQRHYGHTDCPG 506
++TE+RH+ D PG
Sbjct: 182 FETEKRHFTILDAPG 196
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 41.9 bits (94), Expect = 4e-04
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +3
Query: 294 NVGTIGHVDHGKTTLTAAITKVLSDLNLA--QKKGYADIDNAPEEKARGITINVAHVEYQ 467
N+G I HVD GKTT+T + + +++A KG D E+ RGIT+ A V
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHVAGHVDKGNTVTDFLDIERERGITVQSAAVNLD 86
Query: 468 TEQRHYGHTDCPG 506
+ D PG
Sbjct: 87 WKGHRINLIDTPG 99
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = +2
Query: 500 PRSADYIKNMITGTAQMDGAILVVAATDG 586
P D+I NMITGT+Q D AILVV AT G
Sbjct: 256 PGHKDFISNMITGTSQADAAILVVNATTG 284
Score = 35.5 bits (78), Expect = 0.035
Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 23/127 (18%)
Frame = +3
Query: 195 TKHNSPVRIDSIKYNTQETLAEKQIFERTKPH--------CNVGTIGHVDHGKTTLTAAI 350
++ +S V + S + N + +A+ R P N+ +GHVD GK+TL +
Sbjct: 131 SRPSSEVDLTSFRRNQLQNIAKAPSVARKTPKPRVADKDLINLIVVGHVDAGKSTLMGHL 190
Query: 351 TKVLSDLNL---------AQKKGYAD------IDNAPEEKARGITINVAHVEYQTEQRHY 485
L ++ A + G A +D EE+ RG+T+++ ++T R
Sbjct: 191 LHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRI 250
Query: 486 GHTDCPG 506
D PG
Sbjct: 251 VLLDAPG 257
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = +2
Query: 500 PRSADYIKNMITGTAQMDGAILVVAATDG 586
P D+I NMITGT+Q D AILVV AT G
Sbjct: 274 PGHKDFISNMITGTSQADAAILVVNATTG 302
Score = 35.5 bits (78), Expect = 0.035
Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 23/127 (18%)
Frame = +3
Query: 195 TKHNSPVRIDSIKYNTQETLAEKQIFERTKPH--------CNVGTIGHVDHGKTTLTAAI 350
++ +S V + S + N + +A+ R P N+ +GHVD GK+TL +
Sbjct: 149 SRPSSEVDLTSFRRNQLQNIAKAPSVARKTPKPRVADKDLINLIVVGHVDAGKSTLMGHL 208
Query: 351 TKVLSDLNL---------AQKKGYAD------IDNAPEEKARGITINVAHVEYQTEQRHY 485
L ++ A + G A +D EE+ RG+T+++ ++T R
Sbjct: 209 LHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRI 268
Query: 486 GHTDCPG 506
D PG
Sbjct: 269 VLLDAPG 275
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +2
Query: 500 PRSADYIKNMITGTAQMDGAILVVAATDG 586
P D+IKNMITGT+Q D A+LVVA G
Sbjct: 93 PGHRDFIKNMITGTSQADCAVLVVACGTG 121
Score = 38.3 bits (85), Expect = 0.005
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Frame = +3
Query: 276 RTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNL---------AQKKG-----YA-DIDN 410
+ K H N+ IGHVD GK+T T + ++ AQ+ G YA +D
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 411 APEEKARGITINVAHVEYQTEQRHYGHTDCPG 506
E+ RGITI++A +++T + + D PG
Sbjct: 63 LKAERERGITIDIALWKFETAKYYITIIDAPG 94
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +2
Query: 500 PRSADYIKNMITGTAQMDGAILVVAATDG 586
P D+IKNMITGT+Q D A+LVVA G
Sbjct: 93 PGHRDFIKNMITGTSQADCAVLVVACGTG 121
Score = 38.3 bits (85), Expect = 0.005
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Frame = +3
Query: 276 RTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNL---------AQKKG-----YA-DIDN 410
+ K H N+ IGHVD GK+T T + ++ AQ+ G YA +D
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 411 APEEKARGITINVAHVEYQTEQRHYGHTDCPG 506
E+ RGITI++A +++T + + D PG
Sbjct: 63 LKAERERGITIDIALWKFETAKYYITIIDAPG 94
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 595 QTREHLLLXQQIGIQHVVVS*TK 663
QTREH LL Q +G++ ++V+ K
Sbjct: 132 QTREHALLAQTLGVKQLIVACNK 154
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +2
Query: 500 PRSADYIKNMITGTAQMDGAILVVAATDG 586
P D+IKNMITGT+Q D A+LVVA G
Sbjct: 93 PGHRDFIKNMITGTSQADCAVLVVACGTG 121
Score = 38.3 bits (85), Expect = 0.005
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Frame = +3
Query: 276 RTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNL---------AQKKG-----YA-DIDN 410
+ K H N+ IGHVD GK+T T + ++ AQ+ G YA +D
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 411 APEEKARGITINVAHVEYQTEQRHYGHTDCPG 506
E+ RGITI++A +++T + + D PG
Sbjct: 63 LKAERERGITIDIALWKFETAKYYITIIDAPG 94
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 595 QTREHLLLXQQIGIQHVVVS*TK 663
QTREH LL Q +G++ ++V+ K
Sbjct: 132 QTREHALLAQTLGVKQLIVACNK 154
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 38.3 bits (85), Expect = 0.005
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Frame = +3
Query: 276 RTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNL---------AQKKG-----YA-DIDN 410
+ K H N+ IGHVD GK+T T + ++ AQ+ G YA +D
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 411 APEEKARGITINVAHVEYQTEQRHYGHTDCPG 506
E+ RGITI++A +++T + + D PG
Sbjct: 63 LKAERERGITIDIALWKFETAKYYITIIDAPG 94
Score = 37.5 bits (83), Expect = 0.009
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = +2
Query: 500 PRSADYIKNMITGTAQMDGAILVVA 574
P D+IKNMITGT+Q D A+LVVA
Sbjct: 93 PGHRDFIKNMITGTSQADCAVLVVA 117
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 37.5 bits (83), Expect = 0.009
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Frame = +3
Query: 162 ISSEAKPVCKCTKHNSPVRIDSIKYNTQETLAEKQIFERTKPHCNVGTIGHVDHGKTTLT 341
++SEA+ KC + +D + + L E+ I + N+GTIGHV HGK+TL
Sbjct: 1 MASEAEKD-KCQSWLAKQDLDKVGVDNLNPLTEEVISRQAT--INIGTIGHVAHGKSTLV 57
Query: 342 AAITKVLS-------DLNLAQKKGYAD 401
A + V + + N+ K GYA+
Sbjct: 58 KAFSGVHTVKFKRELERNITIKLGYAN 84
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 36.7 bits (81), Expect = 0.015
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +3
Query: 294 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQTE 473
NV + HVDHGKT+ ++ + ++ +D+ +E+ RGIT+ + + E
Sbjct: 22 NVCLVAHVDHGKTSFADSLVSANAVISSRMAGKLRYMDSREDEQTRGITMKSSGISLLCE 81
Query: 474 QRHYGHTDCPG 506
D PG
Sbjct: 82 PLLINLIDSPG 92
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 36.7 bits (81), Expect = 0.015
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +3
Query: 294 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQTE 473
NV + HVDHGKT+ ++ + ++ +D+ +E+ RGIT+ + + E
Sbjct: 22 NVCLVAHVDHGKTSFADSLVSANAVISSRMAGKLRYMDSREDEQTRGITMKSSGISLLCE 81
Query: 474 QRHYGHTDCPG 506
D PG
Sbjct: 82 PLLINLIDSPG 92
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 35.9 bits (79), Expect = 0.027
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +3
Query: 294 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITI 443
N G + HVDHGK+TL + ++ + QK+ +D E+ RGIT+
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPGQKQ---MLDKLQVERERGITV 90
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 33.5 bits (73), Expect = 0.14
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +3
Query: 261 KQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGIT 440
+ + +R + N+ I HVDHGK+TLT ++ + ++ D +E+ R IT
Sbjct: 10 RALMDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCIT 69
Query: 441 I 443
I
Sbjct: 70 I 70
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 33.5 bits (73), Expect = 0.14
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +3
Query: 261 KQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGIT 440
+ + +R + N+ I HVDHGK+TLT ++ + ++ D +E+ R IT
Sbjct: 10 RALMDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCIT 69
Query: 441 I 443
I
Sbjct: 70 I 70
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 33.1 bits (72), Expect = 0.19
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Frame = +3
Query: 294 NVGTIGHVDHGKTTLTAAITKVLSDL-NLAQKKGYADI----DNAPEEKARGITINVAHV 458
N+G H+D GKTT+T I + ++ + +G D+ D E+ RGITI A
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRIDSMHEVRGKDDVGATMDFMDLERQRGITIQSAAT 105
Query: 459 EYQTEQRHYGHTDCPG 506
+ D PG
Sbjct: 106 YVDWHGTNINIIDTPG 121
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 32.7 bits (71), Expect = 0.25
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 294 NVGTIGHVDHGKTTLTAAITKV 359
N+G +GHVD GKTTLT I ++
Sbjct: 15 NLGILGHVDSGKTTLTRRIAEL 36
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 32.7 bits (71), Expect = 0.25
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 294 NVGTIGHVDHGKTTLTAAITKV 359
N+G +GHVD GKTTLT I ++
Sbjct: 15 NLGILGHVDSGKTTLTRRIAEL 36
>Z81016-6|CAB02667.1| 1573|Caenorhabditis elegans Hypothetical protein
F21G4.2 protein.
Length = 1573
Score = 32.7 bits (71), Expect = 0.25
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +3
Query: 225 SIKYNTQETLAEKQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVL 362
S +Y L KQ+ KPH VG +G GK+++T ++ +++
Sbjct: 1340 SARYRPGLNLVVKQLNVEIKPHEKVGIVGRTGAGKSSVTLSLFRII 1385
>Z48621-13|CAA88549.1| 1573|Caenorhabditis elegans Hypothetical
protein F21G4.2 protein.
Length = 1573
Score = 32.7 bits (71), Expect = 0.25
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +3
Query: 225 SIKYNTQETLAEKQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVL 362
S +Y L KQ+ KPH VG +G GK+++T ++ +++
Sbjct: 1340 SARYRPGLNLVVKQLNVEIKPHEKVGIVGRTGAGKSSVTLSLFRII 1385
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 276 RTKPHCNVGTIGHVDHGKTTLT 341
+ K H N+ IGHVD GK+T T
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTT 24
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +3
Query: 255 AEKQIFERTKPHCNVGTIGHVDHGKTTLTAAI 350
A + ER P + +GHVDHGKTTL A+
Sbjct: 147 ASPKDLERRPPIVTI--MGHVDHGKTTLLDAM 176
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.7 bits (61), Expect = 4.1
Identities = 23/99 (23%), Positives = 43/99 (43%), Gaps = 3/99 (3%)
Frame = +3
Query: 135 EKFG*SSCEISSEAKPVCKCTKHNSPVRIDSIKYNTQETLAEK---QIFERTKPHCNVGT 305
EK + EAK + K S + + +E++ EK ++ ++ +
Sbjct: 13594 EKLAQEQSRLEDEAKKSAEKQKLESETKSKQTEEAPKESVDEKPKKKVLKKKTEKSDSSI 13653
Query: 306 IGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEE 422
K+T+ AA T + SD NL +KK ++ +P+E
Sbjct: 13654 SQKSKSAKSTVDAAET-LESDFNLVEKKTVQKVEQSPDE 13691
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.7 bits (61), Expect = 4.1
Identities = 23/99 (23%), Positives = 43/99 (43%), Gaps = 3/99 (3%)
Frame = +3
Query: 135 EKFG*SSCEISSEAKPVCKCTKHNSPVRIDSIKYNTQETLAEK---QIFERTKPHCNVGT 305
EK + EAK + K S + + +E++ EK ++ ++ +
Sbjct: 13594 EKLAQEQSRLEDEAKKSAEKQKLESETKSKQTEEAPKESVDEKPKKKVLKKKTEKSDSSI 13653
Query: 306 IGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEE 422
K+T+ AA T + SD NL +KK ++ +P+E
Sbjct: 13654 SQKSKSAKSTVDAAET-LESDFNLVEKKTVQKVEQSPDE 13691
>AF039049-1|AAB94253.1| 299|Caenorhabditis elegans Serpentine
receptor, class x protein68 protein.
Length = 299
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/62 (24%), Positives = 28/62 (45%)
Frame = -2
Query: 191 FAHWLCFRTNFTAGLTKLFTNVIEAMLNELFNTKRC*ILNFQKFRLIFVWIFYNKYIHLF 12
F + L T+F + + F + +FN KR ++ ++F+WIF LF
Sbjct: 84 FCYELSVFTHFAISINRFFAVWMPLKYESMFNIKRT------RWMIVFMWIFIGSIAVLF 137
Query: 11 FR 6
++
Sbjct: 138 YQ 139
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 27.9 bits (59), Expect = 7.1
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
Frame = +3
Query: 243 QETLAEKQIFER------TKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKG 392
+E L ++F+R TKP N GT+G V + K + A +V+ D L QK G
Sbjct: 842 EEQLTSDRMFDRLRTKFATKPAANSGTLGGVLNSKKKVKTA--QVIHDDKLLQKLG 895
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 27.9 bits (59), Expect = 7.1
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
Frame = +3
Query: 243 QETLAEKQIFER------TKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKG 392
+E L ++F+R TKP N GT+G V + K + A +V+ D L QK G
Sbjct: 842 EEQLTSDRMFDRLRTKFATKPAANSGTLGGVLNSKKKVKTA--QVIHDDKLLQKLG 895
>AL132860-11|CAB60517.1| 440|Caenorhabditis elegans Hypothetical
protein Y56A3A.13 protein.
Length = 440
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 352 LRYYLISIWHRKKVMQILTMPLRRRLEVSLLMW 450
+R+ +S+W+RK+ Q+L+ P L L W
Sbjct: 172 VRFPELSLWNRKRGAQLLSFPSAFTLNTGLAHW 204
>AF069986-1|AAC39136.1| 440|Caenorhabditis elegans nitrilase and
fragile histidinetriad fusion protein NitFhit protein.
Length = 440
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 352 LRYYLISIWHRKKVMQILTMPLRRRLEVSLLMW 450
+R+ +S+W+RK+ Q+L+ P L L W
Sbjct: 172 VRFPELSLWNRKRGAQLLSFPSAFTLNTGLAHW 204
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 27.9 bits (59), Expect = 7.1
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
Frame = +3
Query: 243 QETLAEKQIFER------TKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKG 392
+E L ++F+R TKP N GT+G V + K + A +V+ D L QK G
Sbjct: 425 EEQLTSDRMFDRLRTKFATKPAANSGTLGGVLNSKKKVKTA--QVIHDDKLLQKLG 478
>AF040642-3|AAN73872.2| 502|Caenorhabditis elegans Hypothetical
protein C50D2.7 protein.
Length = 502
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 187 ANVRNTTVLSGLTPLSIILKRH*QKNKSLNVQSPIAMLAQSDML 318
AN ++ +L TP + +L + +KN +PIA + D+L
Sbjct: 418 ANTMDSELLEIRTPANFVLDKKIEKNYQFEAHNPIASWMREDVL 461
>Z82078-2|CAD54160.1| 714|Caenorhabditis elegans Hypothetical
protein W09D6.1b protein.
Length = 714
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 548 MDGAILVVAATDGVCHKHANIYYLXNRLVFNMWW 649
+DG +LV+ T VC HA I N N+ W
Sbjct: 543 IDGNLLVICNTLVVCASHAGIVIAVNPQTGNLIW 576
>Z82078-1|CAB04944.2| 707|Caenorhabditis elegans Hypothetical
protein W09D6.1a protein.
Length = 707
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 548 MDGAILVVAATDGVCHKHANIYYLXNRLVFNMWW 649
+DG +LV+ T VC HA I N N+ W
Sbjct: 543 IDGNLLVICNTLVVCASHAGIVIAVNPQTGNLIW 576
>Z72502-8|CAD44097.1| 374|Caenorhabditis elegans Hypothetical
protein C08B6.11 protein.
Length = 374
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 126 NICEKFG*SSCEISSEAKPVCKCTKHNSPVRIDSIKYNTQETLAEK 263
N+C K S+ +I+ E C + + + D+I Y+ ET+AEK
Sbjct: 42 NLCGKI--SAFKINYEWARYADCLEKSKQLNCDTIFYDELETIAEK 85
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,977,773
Number of Sequences: 27780
Number of extensions: 294527
Number of successful extensions: 804
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 802
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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