Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0871
(681 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 124 5e-29
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 124 7e-29
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 42 3e-04
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 39 0.004
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 39 0.004
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 39 0.004
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 39 0.004
At5g13650.2 68418.m01585 elongation factor family protein contai... 38 0.006
At5g13650.1 68418.m01584 elongation factor family protein contai... 38 0.006
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 38 0.006
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 38 0.008
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 37 0.011
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 36 0.019
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 36 0.025
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 36 0.025
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 36 0.033
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 35 0.043
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 32 0.40
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 32 0.40
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 31 0.71
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 31 0.93
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 31 0.93
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 30 1.6
At5g25230.1 68418.m02991 elongation factor Tu family protein tra... 30 1.6
At3g03800.1 68416.m00390 syntaxin, putative (SYP131) similar to ... 29 2.8
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 29 3.8
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 28 6.6
At1g13080.1 68414.m01516 cytochrome P450 family protein identica... 27 8.7
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 124 bits (299), Expect = 5e-29
Identities = 57/96 (59%), Positives = 66/96 (68%)
Frame = +3
Query: 219 IDSIKYNTQETLAEKQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYA 398
+ S + T F R KPH NVGTIGHVDHGKTTLTAAITKVL++ A+ +
Sbjct: 44 LSSSTFGTSSFWRSMATFTRNKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFD 103
Query: 399 DIDNAPEEKARGITINVAHVEYQTEQRHYGHTDCPG 506
+ID APEEK RGITI AHVEY+T +RHY H DCPG
Sbjct: 104 EIDKAPEEKKRGITIATAHVEYETAKRHYAHVDCPG 139
Score = 48.0 bits (109), Expect = 6e-06
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = +2
Query: 500 PRSADYIKNMITGTAQMDGAILVVAATDG 586
P ADY+KNMITG AQMDG ILVV+ DG
Sbjct: 138 PGHADYVKNMITGAAQMDGGILVVSGPDG 166
Score = 31.1 bits (67), Expect = 0.71
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +1
Query: 589 MPQTREHLLLXQQIGIQHVV 648
MPQT+EH+LL +Q+G+ +V
Sbjct: 168 MPQTKEHILLARQVGVPSLV 187
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 124 bits (298), Expect = 7e-29
Identities = 54/79 (68%), Positives = 62/79 (78%)
Frame = +3
Query: 270 FERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINV 449
FER KPH N+GTIGHVDHGKTTLTAA+T L+ + + K Y +ID APEE+ARGITIN
Sbjct: 73 FERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDEIDAAPEERARGITINT 132
Query: 450 AHVEYQTEQRHYGHTDCPG 506
A VEY+TE RHY H DCPG
Sbjct: 133 ATVEYETENRHYAHVDCPG 151
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/29 (75%), Positives = 24/29 (82%)
Frame = +2
Query: 500 PRSADYIKNMITGTAQMDGAILVVAATDG 586
P ADY+KNMITG AQMDGAILVV+ DG
Sbjct: 150 PGHADYVKNMITGAAQMDGAILVVSGADG 178
Score = 32.7 bits (71), Expect = 0.23
Identities = 12/21 (57%), Positives = 18/21 (85%)
Frame = +1
Query: 589 MPQTREHLLLXQQIGIQHVVV 651
MPQT+EH+LL +Q+G+ +VV
Sbjct: 180 MPQTKEHILLAKQVGVPDMVV 200
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 42.3 bits (95), Expect = 3e-04
Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 18/122 (14%)
Frame = +3
Query: 195 TKHNSPVRIDSIKYNTQETLAEKQIFERTKP---HCNVGTIGHVDHGKTTLTAAITKVLS 365
T+++S ++I K ++ E + ++ N+ +GHVD GK+TL+ + +L
Sbjct: 205 TENSSDIKIRGPKSQSKHKPEEWMLLDKESDALSQLNLAIVGHVDSGKSTLSGRLLHLLG 264
Query: 366 DLNLAQKKGYAD---------------IDNAPEEKARGITINVAHVEYQTEQRHYGHTDC 500
++ Q Y +D + EE+ RGIT+ VA + +++ H D
Sbjct: 265 RISQKQMHKYEKEAKLQGKGSFAYAWALDESAEERERGITMTVAVAYFNSKRHHVVLLDS 324
Query: 501 PG 506
PG
Sbjct: 325 PG 326
Score = 32.3 bits (70), Expect = 0.31
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 500 PRSADYIKNMITGTAQMDGAILVVAATDG 586
P D++ NMI G Q D AILV+ A+ G
Sbjct: 325 PGHKDFVPNMIAGATQADAAILVIDASVG 353
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +2
Query: 500 PRSADYIKNMITGTAQMDGAILVVAATDG 586
P D+IKNMITGT+Q D A+L++ +T G
Sbjct: 93 PGHRDFIKNMITGTSQADCAVLIIDSTTG 121
Score = 37.5 bits (83), Expect = 0.008
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 15/92 (16%)
Frame = +3
Query: 276 RTKPHCNVGTIGHVDHGKTTLTAAI---------------TKVLSDLNLAQKKGYADIDN 410
+ K H N+ IGHVD GK+T T + K +++N K +D
Sbjct: 3 KEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDK 62
Query: 411 APEEKARGITINVAHVEYQTEQRHYGHTDCPG 506
E+ RGITI++A +++T + + D PG
Sbjct: 63 LKAERERGITIDIALWKFETTKYYCTVIDAPG 94
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +2
Query: 500 PRSADYIKNMITGTAQMDGAILVVAATDG 586
P D+IKNMITGT+Q D A+L++ +T G
Sbjct: 93 PGHRDFIKNMITGTSQADCAVLIIDSTTG 121
Score = 37.5 bits (83), Expect = 0.008
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 15/92 (16%)
Frame = +3
Query: 276 RTKPHCNVGTIGHVDHGKTTLTAAI---------------TKVLSDLNLAQKKGYADIDN 410
+ K H N+ IGHVD GK+T T + K +++N K +D
Sbjct: 3 KEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDK 62
Query: 411 APEEKARGITINVAHVEYQTEQRHYGHTDCPG 506
E+ RGITI++A +++T + + D PG
Sbjct: 63 LKAERERGITIDIALWKFETTKYYCTVIDAPG 94
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +2
Query: 500 PRSADYIKNMITGTAQMDGAILVVAATDG 586
P D+IKNMITGT+Q D A+L++ +T G
Sbjct: 93 PGHRDFIKNMITGTSQADCAVLIIDSTTG 121
Score = 37.5 bits (83), Expect = 0.008
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 15/92 (16%)
Frame = +3
Query: 276 RTKPHCNVGTIGHVDHGKTTLTAAI---------------TKVLSDLNLAQKKGYADIDN 410
+ K H N+ IGHVD GK+T T + K +++N K +D
Sbjct: 3 KEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDK 62
Query: 411 APEEKARGITINVAHVEYQTEQRHYGHTDCPG 506
E+ RGITI++A +++T + + D PG
Sbjct: 63 LKAERERGITIDIALWKFETTKYYCTVIDAPG 94
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +2
Query: 500 PRSADYIKNMITGTAQMDGAILVVAATDG 586
P D+IKNMITGT+Q D A+L++ +T G
Sbjct: 93 PGHRDFIKNMITGTSQADCAVLIIDSTTG 121
Score = 37.5 bits (83), Expect = 0.008
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 15/92 (16%)
Frame = +3
Query: 276 RTKPHCNVGTIGHVDHGKTTLTAAI---------------TKVLSDLNLAQKKGYADIDN 410
+ K H N+ IGHVD GK+T T + K +++N K +D
Sbjct: 3 KEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDK 62
Query: 411 APEEKARGITINVAHVEYQTEQRHYGHTDCPG 506
E+ RGITI++A +++T + + D PG
Sbjct: 63 LKAERERGITIDIALWKFETTKYYCTVIDAPG 94
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 37.9 bits (84), Expect = 0.006
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Frame = +3
Query: 258 EKQIFERTKPHCNVGTIGHVDHGKTTLTAAI---TKVLSDLNLAQKKGYADIDNAPEEKA 428
+KQ+ R N+ + HVDHGKTTL ++ KV D + Q++ +D+ E+
Sbjct: 74 KKQLDRRDNVR-NIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVMQER---IMDSNDLERE 129
Query: 429 RGITINVAHVEYQTEQRHYGHTDCPG 506
RGITI + + D PG
Sbjct: 130 RGITILSKNTSITYKNTKVNIIDTPG 155
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 37.9 bits (84), Expect = 0.006
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Frame = +3
Query: 258 EKQIFERTKPHCNVGTIGHVDHGKTTLTAAI---TKVLSDLNLAQKKGYADIDNAPEEKA 428
+KQ+ R N+ + HVDHGKTTL ++ KV D + Q++ +D+ E+
Sbjct: 73 KKQLDRRDNVR-NIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVMQER---IMDSNDLERE 128
Query: 429 RGITINVAHVEYQTEQRHYGHTDCPG 506
RGITI + + D PG
Sbjct: 129 RGITILSKNTSITYKNTKVNIIDTPG 154
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 37.9 bits (84), Expect = 0.006
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +3
Query: 282 KPHCNVGTIGHVDHGKTTLTAAITKVLS-DLNLAQ-KKGYADIDNAPEEKARGITINVAH 455
K + N+G + H+D GKTT T I + + + +G A +D +E+ RGITI A
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTGRNYKIGEVHEGTATMDWMEQEQERGITITSAA 153
Query: 456 VEYQTEQRHYGHTDCPG 506
++ D PG
Sbjct: 154 TTTFWDKHRINIIDTPG 170
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 37.5 bits (83), Expect = 0.008
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +3
Query: 294 NVGTIGHVDHGKTTLTAAITKVLSDL-NLAQKKGYADIDNAPEEKARGITINVAHVEYQT 470
N I H+DHGK+TL + +V + N K+ + +DN E+ RGITI + Q
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDMKEQF--LDNMDLERERGITIKL-----QA 140
Query: 471 EQRHYGHTDCP 503
+ Y + D P
Sbjct: 141 ARMRYVYEDTP 151
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 37.1 bits (82), Expect = 0.011
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 15/90 (16%)
Frame = +3
Query: 282 KPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYAD---------------IDNAP 416
K H NV IGHVD GK+T+ I + ++ Q + Y +D
Sbjct: 99 KRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTNE 158
Query: 417 EEKARGITINVAHVEYQTEQRHYGHTDCPG 506
EE+ +G T+ V ++TE + D PG
Sbjct: 159 EERLKGKTVEVGRAHFETESTRFTILDAPG 188
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 36.3 bits (80), Expect = 0.019
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 7/43 (16%)
Frame = +3
Query: 294 NVGTIGHVDHGKTTLTAAIT-----KVLSDL--NLAQKKGYAD 401
N+GTIGHV HGK+T+ A++ K S+L N+ K GYA+
Sbjct: 35 NIGTIGHVAHGKSTIVKAVSGVHTVKFKSELERNITIKLGYAN 77
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 35.9 bits (79), Expect = 0.025
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 7/43 (16%)
Frame = +3
Query: 294 NVGTIGHVDHGKTTLTAAITKVLS-------DLNLAQKKGYAD 401
N+GTIGHV HGK+T+ AI+ V + + N+ K GYA+
Sbjct: 41 NIGTIGHVAHGKSTIVKAISGVQTVRFKNELERNITIKLGYAN 83
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 35.9 bits (79), Expect = 0.025
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 7/43 (16%)
Frame = +3
Query: 294 NVGTIGHVDHGKTTLTAAITKVLS-------DLNLAQKKGYAD 401
N+GTIGHV HGK+T+ AI+ V + + N+ K GYA+
Sbjct: 41 NIGTIGHVAHGKSTIVKAISGVQTVRFKNELERNITIKLGYAN 83
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 35.5 bits (78), Expect = 0.033
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 7/43 (16%)
Frame = +3
Query: 294 NVGTIGHVDHGKTTLTAAITKVLS-------DLNLAQKKGYAD 401
N+GTIGHV HGK+T+ AI+ V + + N+ K GYA+
Sbjct: 35 NIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYAN 77
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 35.1 bits (77), Expect = 0.043
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +3
Query: 294 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITI 443
N+ I HVDHGK+TLT ++ + D +E RGITI
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITI 70
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 31.9 bits (69), Expect = 0.40
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Frame = +3
Query: 294 NVGTIGHVDHGKTTLTAAITKVLSDLN-LAQKKGY----ADIDNAPEEKARGITINVAHV 458
N+G H+D GKTTLT + ++ + + +G A +D+ E+ +GITI A
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAAT 126
Query: 459 EYQTEQRHYGHTDCPG 506
+ D PG
Sbjct: 127 YCTWKDYKVNIIDTPG 142
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 31.9 bits (69), Expect = 0.40
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Frame = +3
Query: 294 NVGTIGHVDHGKTTLTAAITKVLSDLN-LAQKKGY----ADIDNAPEEKARGITINVAHV 458
N+G H+D GKTTLT + ++ + + +G A +D+ E+ +GITI A
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAAT 126
Query: 459 EYQTEQRHYGHTDCPG 506
+ D PG
Sbjct: 127 YCTWKDYKVNIIDTPG 142
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 31.1 bits (67), Expect = 0.71
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = +3
Query: 294 NVGTIGHVDHGKTTLT----AAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVE 461
N+ + HVDHGKTTL A+ + LA K + +D EE+ R IT+ + +
Sbjct: 11 NICILAHVDHGKTTLADHLIASSGGGVLHPRLAGKLRF--MDYLDEEQRRAITMKSSSIS 68
Query: 462 YQTEQRHYGHTDCPG 506
+ + D PG
Sbjct: 69 LKYKDYSLNLIDSPG 83
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 30.7 bits (66), Expect = 0.93
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = +3
Query: 294 NVGTIGHVDHGKTTLTAAI---TKVLSDLNLAQKKGYADIDNAPEEKARGITI 443
NV +GH+ HGKT + T +S N +K D +E+ R I+I
Sbjct: 140 NVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYTDTRVDEQERNISI 192
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 30.7 bits (66), Expect = 0.93
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = +3
Query: 294 NVGTIGHVDHGKTTLTAAI---TKVLSDLNLAQKKGYADIDNAPEEKARGITI 443
NV +GH+ HGKT + T +S N +K D +E+ R I+I
Sbjct: 140 NVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYTDTRVDEQERNISI 192
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 294 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPE-EKARGITI 443
N I H+DHGK+TL + ++ + KKG+ + ++ RGIT+
Sbjct: 68 NFSIIAHIDHGKSTLADRLMELTGTI----KKGHGQPQYLDKLQRERGITV 114
>At5g25230.1 68418.m02991 elongation factor Tu family protein
translation Elongation Factor 2, Schizosaccharomyces
pombe, PIR:T39902
Length = 973
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +3
Query: 294 NVGTIGHVDHGKTTLTAAI---TKVLSDLNLAQKKGYADIDNAPEEKARGITI 443
NV +GH+ HGKT + T +S N K D +E+ R I+I
Sbjct: 126 NVALVGHLQHGKTVFMDMLVEQTHRMSTFNAENDKHMRYTDTRVDEQERNISI 178
>At3g03800.1 68416.m00390 syntaxin, putative (SYP131) similar to
SP|Q9ZSD4 Syntaxin 121 (AtSYP121) (Syntaxin-related
protein At-Syr1) {Arabidopsis thaliana}
Length = 306
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +3
Query: 246 ETLAEKQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVLSD 368
E L + + RTKP C GT VD +T T A+ K D
Sbjct: 101 EELDRENLENRTKPGCGKGT--GVDRTRTATTIAVKKKFKD 139
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3
Query: 306 IGHVDHGKTTLTAAITK 356
+GHVDHGKTTL I K
Sbjct: 507 MGHVDHGKTTLLDYIRK 523
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 297 VGTIGHVDHGKTTLTAAI 350
V +GHVDHGKT+L A+
Sbjct: 222 VTVMGHVDHGKTSLLDAL 239
>At1g13080.1 68414.m01516 cytochrome P450 family protein identical
to gb|D78605 cytochrome P450 monooxygenase from
Arabidopsis thaliana and is a member of the PF|00067
Cytochrome P450 family. ESTs gb|Z18072, gb|Z35218 and
gb|T43466 come from this gene
Length = 502
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -1
Query: 564 NIAPSICAVPVIMFLM*SADLGSQCVHNASVRFG 463
N+ PS ++P+I L A L +C H S+++G
Sbjct: 30 NLPPSPSSLPIIGNLHHLAGLPHRCFHKLSIKYG 63
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,793,972
Number of Sequences: 28952
Number of extensions: 260862
Number of successful extensions: 624
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 622
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1438152744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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