Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0869
         (759 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    24   1.1  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    24   1.5  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    24   1.5  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    22   4.6  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   6.1  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   6.1  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +3

Query: 414 SKIPIEVEDPTFTIYPATYP 473
           S+IP EVED   T +  TYP
Sbjct: 336 SQIPSEVEDKYTTYFLNTYP 355


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +1

Query: 124 KSKEDEKKALKNGPKLEDVGMD 189
           K +E E K  K+ PK+EDVG D
Sbjct: 233 KEEEGEDKD-KDKPKIEDVGED 253


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = -2

Query: 674 EGCNTKLGVILELASEAVICDHGHVDLYSS--HW 579
           E  + K+ V L L   + +  HGH  +YS+  HW
Sbjct: 430 EKLDVKVTVQLWLGDPSSVLSHGHRVIYSTVGHW 463


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 712 GRFGTSSKLPYFWR 671
           G   T  KLPYFW+
Sbjct: 100 GILTTPFKLPYFWK 113


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +3

Query: 402 NFLNSKIPIEVEDPTFTIYPATYPLSE 482
           NFL  K   E  +    + P TYP S+
Sbjct: 25  NFLQEKTTYEYYENNQALPPITYPPSD 51


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +3

Query: 402 NFLNSKIPIEVEDPTFTIYPATYPLSE 482
           NFL  K   E  +    + P TYP S+
Sbjct: 16  NFLQEKTTYEYYENNQALPPITYPPSD 42


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,980
Number of Sequences: 336
Number of extensions: 2913
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)