Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0869
         (759 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0392 - 8070342-8071628                                           30   2.3  
02_05_1272 + 35373843-35374031,35374343-35374490,35374586-353747...    30   2.3  
02_05_0203 + 26717246-26717354,26718797-26719575                       28   9.3  
01_01_0750 + 5798607-5800142                                           28   9.3  

>03_02_0392 - 8070342-8071628
          Length = 428

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +1

Query: 61  KMSSGQWEVVGKNKKSQNGKLKSKEDEKK 147
           K  +G+W VVG NK++QNG  K ++ + +
Sbjct: 234 KTRAGEW-VVGGNKETQNGNAKKRDRDSR 261


>02_05_1272 +
           35373843-35374031,35374343-35374490,35374586-35374704,
           35374992-35375121,35375122-35375201
          Length = 221

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +1

Query: 595 RSTCPWSQITASDASSRITPSFVLHPSRSMEV*NSYRID 711
           R T PWS  T S       PS +L  S+  +  NSY ++
Sbjct: 127 RHTRPWSSCTKSSNRGNFHPSSILQTSKPDKTRNSYPVE 165


>02_05_0203 + 26717246-26717354,26718797-26719575
          Length = 295

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = +2

Query: 5   LLFLVFTKVTLIFSRILCSKCLAVNGKS 88
           LLFL+ T VT++F+ ++ +K   V G+S
Sbjct: 225 LLFLIITNVTIVFTLLMENKDPNVRGRS 252


>01_01_0750 + 5798607-5800142
          Length = 511

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 15/25 (60%), Positives = 19/25 (76%)
 Frame = -3

Query: 334 ASSVTSMASRAPSMVLGIFGLGGST 260
           A S+TS  S APS++ G FGLGGS+
Sbjct: 335 AGSLTSCDS-APSLLEGRFGLGGSS 358


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,117,637
Number of Sequences: 37544
Number of extensions: 309495
Number of successful extensions: 685
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 685
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)