Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0869
         (759 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_2113| Best HMM Match : No HMM Matches (HMM E-Value=.)               31   1.3  
SB_10519| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.8  
SB_53911| Best HMM Match : Ald_Xan_dh_C2 (HMM E-Value=0)               28   7.2  

>SB_2113| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 51

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = +1

Query: 67  SSGQWEVVGKNKKSQNGKLKSKEDEKKALKNGPKLE 174
           S+G+WEVVGK  K +    K K  EK +  + PKL+
Sbjct: 15  SAGKWEVVGKGGKKRQHNDKKK--EKFSSADAPKLD 48


>SB_10519| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 873

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = +3

Query: 453 IYPATYPLSETPDELKRTLQVFFKMLERQMCSYSLMALLQ 572
           I   T  ++E PD + R ++  FK L+  +CS +  +L++
Sbjct: 559 IRQVTCVINELPDSVNRVMKYLFKFLKHSICSLNARSLVK 598


>SB_53911| Best HMM Match : Ald_Xan_dh_C2 (HMM E-Value=0)
          Length = 817

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = +1

Query: 598 STCPWSQITASDASSRITPSFVLHPSRSMEV*NSYRIDPYRNVSTVGIWTRW 753
           +T P S  TA+ AS+ I    VL+    +      RI+PY+  +  G W  W
Sbjct: 570 NTVPNSSPTAASASTDIYGMAVLNACEKIV----RRIEPYKKANPKGTWNDW 617


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,845,015
Number of Sequences: 59808
Number of extensions: 359631
Number of successful extensions: 919
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 919
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2070332524
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)