Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0869
         (759 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032632-8|CAA21592.2|  420|Caenorhabditis elegans Hypothetical ...    29   4.7  
Z68215-15|CAN86580.1| 1544|Caenorhabditis elegans Hypothetical p...    28   6.3  
Z68215-11|CAH60786.1| 1301|Caenorhabditis elegans Hypothetical p...    28   6.3  
Z68215-6|CAB54213.2| 1304|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z68215-5|CAA92456.1| 1586|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z68215-4|CAA92457.1| 1584|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z48621-12|CAA88545.2|  425|Caenorhabditis elegans Hypothetical p...    28   6.3  
AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical...    28   8.3  

>AL032632-8|CAA21592.2|  420|Caenorhabditis elegans Hypothetical
           protein Y11D7A.13 protein.
          Length = 420

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +1

Query: 28  SNFNFLSNTLLKMSSGQWEVVGKNKKSQNGKLKSKEDEKK 147
           +   +  N + K++ GQ  ++ K       KLK+ EDEKK
Sbjct: 15  ATMEWAKNYVSKLNDGQLALLQKMYADHQAKLKASEDEKK 54


>Z68215-15|CAN86580.1| 1544|Caenorhabditis elegans Hypothetical
            protein C53B4.4e protein.
          Length = 1544

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +1

Query: 85   VVGKNKKSQNGKLKSKEDEKKALKNGPKL 171
            VVGK K+S + + K K+  KK L   PK+
Sbjct: 958  VVGKRKESPSDEKKEKKRLKKKLSESPKI 986


>Z68215-11|CAH60786.1| 1301|Caenorhabditis elegans Hypothetical
           protein C53B4.4d protein.
          Length = 1301

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +1

Query: 85  VVGKNKKSQNGKLKSKEDEKKALKNGPKL 171
           VVGK K+S + + K K+  KK L   PK+
Sbjct: 678 VVGKRKESPSDEKKEKKRLKKKLSESPKI 706


>Z68215-6|CAB54213.2| 1304|Caenorhabditis elegans Hypothetical
           protein C53B4.4c protein.
          Length = 1304

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +1

Query: 85  VVGKNKKSQNGKLKSKEDEKKALKNGPKL 171
           VVGK K+S + + K K+  KK L   PK+
Sbjct: 678 VVGKRKESPSDEKKEKKRLKKKLSESPKI 706


>Z68215-5|CAA92456.1| 1586|Caenorhabditis elegans Hypothetical protein
            C53B4.4b protein.
          Length = 1586

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +1

Query: 85   VVGKNKKSQNGKLKSKEDEKKALKNGPKL 171
            VVGK K+S + + K K+  KK L   PK+
Sbjct: 958  VVGKRKESPSDEKKEKKRLKKKLSESPKI 986


>Z68215-4|CAA92457.1| 1584|Caenorhabditis elegans Hypothetical protein
            C53B4.4a protein.
          Length = 1584

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +1

Query: 85   VVGKNKKSQNGKLKSKEDEKKALKNGPKL 171
            VVGK K+S + + K K+  KK L   PK+
Sbjct: 958  VVGKRKESPSDEKKEKKRLKKKLSESPKI 986


>Z48621-12|CAA88545.2|  425|Caenorhabditis elegans Hypothetical
           protein R07B1.8 protein.
          Length = 425

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +1

Query: 97  NKKSQNGKLKSKEDEKKALKNGPKLED 177
           NKK+ N   KS + EKK  K GP++++
Sbjct: 352 NKKNNNDVEKSTQIEKKPEKQGPEIQE 378


>AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical
            protein Y71F9AL.17 protein.
          Length = 1232

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 8/89 (8%)
 Frame = +3

Query: 495  LKRTLQVFFKMLERQMCSYSLMALLQLLPMT*VEVYMPMV--------TDYCFRC*LQDN 650
            L+  +  FFKM + + C+     LL+L P   V   +  V        TD       + N
Sbjct: 1114 LRSAINTFFKMKQMKTCASLCKRLLELAPKPEVAAQIRKVLTAAEKDNTDAHQLTYDEHN 1173

Query: 651  PEFCIASLQKYGSLELVPNRPL*ECLYCG 737
            P F + S Q    + L   RPL +C YCG
Sbjct: 1174 P-FVVCSRQ---FVPLYRGRPLCKCPYCG 1198


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,911,133
Number of Sequences: 27780
Number of extensions: 277898
Number of successful extensions: 899
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 898
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)