Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0868
         (678 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q86QT5 Cluster: Putative uncharacterized protein; n=1; ...    58   3e-07
UniRef50_Q86QT4 Cluster: Putative uncharacterized protein; n=1; ...    50   7e-05
UniRef50_UPI00006CE956 Cluster: Eukaryotic aspartyl protease fam...    35   1.6  

>UniRef50_Q86QT5 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 77

 Score = 57.6 bits (133), Expect = 3e-07
 Identities = 31/62 (50%), Positives = 36/62 (58%)
 Frame = -3

Query: 622 VFFYIILVDPADFVVPPIDK*KT*TLVXXXXXXXXXXXXTGDTSREKKNCHFY*IPSIFI 443
           + F IIL DPADFVVP     +   L             TGDTS+EK+NC+FY IP IFI
Sbjct: 16  ILFMIILADPADFVVPQSINKRPKHLYKINLKQTKGIRQTGDTSKEKQNCYFYLIPRIFI 75

Query: 442 FI 437
           FI
Sbjct: 76  FI 77


>UniRef50_Q86QT4 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 47

 Score = 49.6 bits (113), Expect = 7e-05
 Identities = 23/26 (88%), Positives = 23/26 (88%)
 Frame = +3

Query: 354 LKLENGWTDLANFGLELFVEVQRRFK 431
           LKLENGWTDLANFGLEL VEVQR  K
Sbjct: 20  LKLENGWTDLANFGLELPVEVQRGLK 45


>UniRef50_UPI00006CE956 Cluster: Eukaryotic aspartyl protease family
           protein; n=1; Tetrahymena thermophila SB210|Rep:
           Eukaryotic aspartyl protease family protein -
           Tetrahymena thermophila SB210
          Length = 550

 Score = 35.1 bits (77), Expect = 1.6
 Identities = 23/95 (24%), Positives = 40/95 (42%)
 Frame = -3

Query: 391 KLAKSVQPFSSFSETNEQQFIFI*YSQNRLLRPRLEQHTGYNNLEQGPG*MPYDRLIKNI 212
           K+  ++  F++  E    + I I     R+  P+L  H    NLEQG    P  +  K  
Sbjct: 2   KVLFAIFTFATILEVYAAELIKIPLQAVRIEEPKLSNHAYMRNLEQGS--TPKQQFSKQS 59

Query: 211 AFYDIGNNDIPHKTTTFN*YFGELDMLERLAQLYC 107
           + Y +G   I  +  +F+  F     +  +  +YC
Sbjct: 60  SLYYVGTVKIGSQEQSFSLLFDTTTSISWIPSVYC 94


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 611,446,823
Number of Sequences: 1657284
Number of extensions: 11680531
Number of successful extensions: 21463
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21455
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52479343733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)