Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0868
         (678 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.3  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   4.0  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   9.3  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 232 HMAFSRDLVLGYYNRYVVLN 291
           H   + +LVL   NRY++LN
Sbjct: 817 HCYLATELVLMLKNRYIILN 836


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -3

Query: 655 YISKVLLLFMIVFFYIILVDPADFVVPPID 566
           Y + VL LF+ +F Y+ +     +   PID
Sbjct: 128 YQAPVLQLFLYIFTYLSVTCYVTYAWSPID 157


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 10/33 (30%), Positives = 14/33 (42%)
 Frame = -1

Query: 129 NDWLSCIVNNLNRYPHLSSTAIKIRIENKGISF 31
           N+W    +N L  Y   +    KIR    G+ F
Sbjct: 121 NEWTKIEINLLKHYQSTTDLHKKIRYSAFGMIF 153


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,111
Number of Sequences: 336
Number of extensions: 3405
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)