Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0867
(710 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 1e-14
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 61 1e-09
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 59 3e-09
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 54 9e-08
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 5e-07
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 51 8e-07
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 48 6e-06
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 44 9e-05
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 40 0.002
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 40 0.002
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 37 0.019
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.057
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 34 0.099
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.099
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.099
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 31 0.92
SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 30 1.6
SB_6554| Best HMM Match : Isy1 (HMM E-Value=0) 30 2.1
SB_51151| Best HMM Match : Vicilin_N (HMM E-Value=0.19) 29 2.8
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 29 2.8
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 29 2.8
SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 29 3.7
SB_41425| Best HMM Match : DCX (HMM E-Value=8.6e-06) 29 4.9
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 28 8.6
SB_51035| Best HMM Match : Extensin_2 (HMM E-Value=0.33) 28 8.6
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 77.0 bits (181), Expect = 1e-14
Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 4/143 (2%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 439
+PFNKNFY+ HP + K+S E+++ R + VSG P F F + + ++
Sbjct: 475 KPFNKNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGFDEQMMASIRK 534
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLLAYPK----RVPAKRWPTSCQPLCT*TTNRLFGEVMV 607
+ Y +PT IQ Q PIA+SG++++ K + A WP + G+ +
Sbjct: 535 LEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWPALVHIMD--QPELQVGDGPI 592
Query: 608 RLLWSLAPTRELAQPXSASCCRF 676
L+ APTREL Q RF
Sbjct: 593 VLI--CAPTRELCQQIYTEARRF 613
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 63.3 bits (147), Expect = 2e-10
Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 4/107 (3%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVK 436
QPF K+FY P + K +P E +E+R + E + V G P++ + + + +K
Sbjct: 62 QPFRKDFYVEVPELAKMTPEETDEFRLSLENIHVRGKNAPKPVKTWAQTGVQLKILDVLK 121
Query: 437 TMGYKEPTPIQAQGWPIAMSGKNLLAY---PKRVPAKRWPTSCQPLC 568
Y++PTPIQAQ P+ MSG++++A P R A + C+ C
Sbjct: 122 KNSYEKPTPIQAQAIPVIMSGRDMIAIVMTPTRELAIQIHRECKKFC 168
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 60.9 bits (141), Expect = 1e-09
Identities = 27/56 (48%), Positives = 37/56 (66%)
Frame = +2
Query: 308 RSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQ 475
R +EV+ YR + ++TV+G V P+ FEE+ FPDY+Q K G+ EPT IQAQ
Sbjct: 57 RGQHEVDAYRRSKDLTVNGRNVPKPVTTFEESAFPDYIQSYFKREGFTEPTMIQAQ 112
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/54 (40%), Positives = 31/54 (57%)
Frame = +1
Query: 547 YILPAIVHINXQPPIRRGDGPIALVFGAYQRVSTTXFRKLLQILDTHLMVRNTC 708
+ILP IVHIN QP ++ GDGPI LV R +++ + H +R+TC
Sbjct: 113 FILPGIVHINHQPLLQPGDGPIVLVL-CPTRELAQQVQEVAYSVGKHCKLRSTC 165
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 59.3 bits (137), Expect = 3e-09
Identities = 27/91 (29%), Positives = 48/91 (52%)
Frame = +2
Query: 281 YDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 460
Y HPT+ + +V++ R+ E+ V G V +P+ F +F + + + + GY PT
Sbjct: 161 YKEHPTIAALTAEQVKQLRDKMEIKVKGEHVVSPVLEFFHCSFNESLSKNLSNHGYHSPT 220
Query: 461 PIQAQGWPIAMSGKNLLAYPKRVPAKRWPTS 553
PIQ Q P+ +SG++++ K P+S
Sbjct: 221 PIQMQVLPVLLSGRDVMVCASTGSGKLLPSS 251
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 54.4 bits (125), Expect = 9e-08
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Frame = +2
Query: 266 FNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 445
F ++YD + V + S V+E R + + + G + PI+ F + N P + +
Sbjct: 32 FMWSYYDENEKVSRLSDEVVDEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKN 91
Query: 446 YKEPTPIQAQGWPIAMSGKNLLAYPKRVPAKRWPTSCQPLCT*TTNRL---FGEVMVRLL 616
++ PTPIQ Q MSG++++ + K S PLC + G+ V L+
Sbjct: 92 FQVPTPIQMQSLSCVMSGRDIIGLAETGSGKTLAYSL-PLCMLLRTKAPSNPGDTPVALI 150
Query: 617 WSLAPTRELAQ 649
L PTREL Q
Sbjct: 151 --LTPTRELMQ 159
Score = 48.8 bits (111), Expect = 4e-06
Identities = 22/61 (36%), Positives = 36/61 (59%)
Frame = +1
Query: 499 KEFIGVPKTGSGKTLAYILPAIVHINXQPPIRRGDGPIALVFGAYQRVSTTXFRKLLQIL 678
++ IG+ +TGSGKTLAY LP + + + P GD P+AL+ + + F + ++L
Sbjct: 110 RDIIGLAETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALILTPTRELMQQVFMNVSEML 169
Query: 679 D 681
D
Sbjct: 170 D 170
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 52.0 bits (119), Expect = 5e-07
Identities = 34/104 (32%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Frame = +2
Query: 347 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLAYPK- 523
EV VSG I FEEAN + V+ YK+PTP+Q PI ++G++++A +
Sbjct: 698 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQT 757
Query: 524 ---RVPAKRWPTSCQPLCT*TTNRLFGEVMVRLLWSLAPTRELA 646
+ A P + T+ F E +APTRELA
Sbjct: 758 GSGKTAAFLLPVMTSMMNAGLTSSSFSETQTPQAMCIAPTRELA 801
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 51.2 bits (117), Expect = 8e-07
Identities = 20/60 (33%), Positives = 37/60 (61%)
Frame = +2
Query: 332 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+R + ++ G + PI+ ++EA PD + + V +GYK+PTPIQ Q PI + ++++
Sbjct: 83 FREDFNISTKGGRIPFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDII 142
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Frame = +1
Query: 499 KEFIGVPKTGSGKTLAYILPAIVHINXQPPIRRGD----GPIALVFGAYQRVSTTXFRKL 666
++ IGV +TGSGKT A+ +P +V I P I R + GP AL+ + ++ ++
Sbjct: 139 RDIIGVAETGSGKTAAFAIPLLVWIMGLPKIERDNDADQGPYALILAPTRELAQQIEEEI 198
Query: 667 LQ 672
L+
Sbjct: 199 LK 200
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 48.4 bits (110), Expect = 6e-06
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = +2
Query: 320 EVEEYRNNHEVTVSGVEVHNPIQYF----EEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 487
++ +R+ + V G +V +P++ F E FPDY+ V+ GY PTPIQ Q P+
Sbjct: 137 KINLFRHEQHIYVKGADVPDPVETFSQLIERYGFPDYIIHNVQERGYTTPTPIQMQATPL 196
Query: 488 AMSG 499
G
Sbjct: 197 MAHG 200
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 48.0 bits (109), Expect = 8e-06
Identities = 32/110 (29%), Positives = 46/110 (41%)
Frame = +2
Query: 356 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLAYPKRVPA 535
VSG I F E F + + + GY+ PTP+Q PI M+G++L+A +
Sbjct: 469 VSGENQPPKITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMACAQTGSG 528
Query: 536 KRWPTSCQPLCT*TTNRLFGEVMVRLLWSLAPTRELAQPXSASCCRFWTH 685
K L + L L +APTRELA+ +F H
Sbjct: 529 KTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKFSDH 578
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 44.4 bits (100), Expect = 9e-05
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = +2
Query: 347 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
EV VSG I FEEAN + V+ YK+PTP+Q PI ++G++++A
Sbjct: 121 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMA 176
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 39.9 bits (89), Expect = 0.002
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLAYPKRVPAKRWPTSCQPLCT 571
FE+ + G+ G+ +P+PIQ + P+A++G+++LA K K PL
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKT-AAYLVPLLE 107
Query: 572 *T-TNRLFGEVMVRLLWSLAPTRELAQPXSASCCRFWTHI 688
T T + + +V L PTRELA S C H+
Sbjct: 108 RTDTTKNCIQALV-----LVPTRELALQTSQICIELGKHM 142
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 39.9 bits (89), Expect = 0.002
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLAYPKRVPAKRWPTSCQPLCT 571
FE+ + G+ G+ +P+PIQ + P+A++G+++LA K K PL
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKT-AAYLVPLLE 107
Query: 572 *T-TNRLFGEVMVRLLWSLAPTRELAQPXSASCCRFWTHI 688
T T + + +V L PTRELA S C H+
Sbjct: 108 RTDTTKNCIQALV-----LVPTRELALQTSQICIELGKHM 142
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 36.7 bits (81), Expect = 0.019
Identities = 21/63 (33%), Positives = 35/63 (55%)
Frame = +1
Query: 499 KEFIGVPKTGSGKTLAYILPAIVHINXQPPIRRGDGPIALVFGAYQRVSTTXFRKLLQIL 678
++ +G KTGSGKTLA+++P I+ + DG ALV + ++ F L++I
Sbjct: 88 RDVLGAAKTGSGKTLAFLIP-IIETLWRQKWTSMDGLGALVISPTRELAYQTFEVLVKIG 146
Query: 679 DTH 687
+ H
Sbjct: 147 NKH 149
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 383 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLAYPK 523
++ F + G+ G+ PT IQ QG P+A+SG+++L K
Sbjct: 49 VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAK 95
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 35.1 bits (77), Expect = 0.057
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +1
Query: 433 KDNGLQRTDAHSSSRLADSYVWKEFIGVPKTGSGKTLAYILPAI-VHINXQPPIRRGDGP 609
KD G +A ++ +G KTGSGKTLA+++P + + Q R G G
Sbjct: 588 KDMGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAFLVPVVELLYKLQFKTRNGTGV 647
Query: 610 IAL 618
I +
Sbjct: 648 III 650
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 34.3 bits (75), Expect = 0.099
Identities = 24/74 (32%), Positives = 35/74 (47%)
Frame = +2
Query: 425 QGVKTMGYKEPTPIQAQGWPIAMSGKNLLAYPKRVPAKRWPTSCQPLCT*TTNRLFGEVM 604
+ V +G+ PTPIQA P+A+ GK++ A K P+ R
Sbjct: 23 RAVNELGFLHPTPIQASTIPVALMGKDVCACAATGTGKT-AAFMLPILERLLYRPTQSPA 81
Query: 605 VRLLWSLAPTRELA 646
+R+L + PTRELA
Sbjct: 82 IRVL-VITPTRELA 94
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 34.3 bits (75), Expect = 0.099
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 383 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
I FE+ + + + V GYK+PTP+Q PI ++L+A
Sbjct: 874 ILQFEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKRDLMA 917
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +1
Query: 499 KEFIGVPKTGSGKTLAYILPAIVHINXQPP 588
++ + +TGSGKT A+++P + I + P
Sbjct: 913 RDLMACAQTGSGKTAAFLIPILSRIYMEGP 942
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 34.3 bits (75), Expect = 0.099
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 436 DNGLQRTDAHSSSRLADSYVW-KEFIGVPKTGSGKTLAYILPAIVHI 573
D G + S + + ++ ++ IG +TGSGKTLA+ +P I HI
Sbjct: 147 DQGFSKPTPIQSLSIPPALLYHRDIIGAAETGSGKTLAFGIPIIQHI 193
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 31.1 bits (67), Expect = 0.92
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +1
Query: 433 KDNGLQRTDAHSSSRLADSYVWKEFIGVPKTGSGKTLAYILPAIVHI-NXQPPIRRGDGP 609
+D G+ +S Y ++ IG +TG+GKTL++ LP + + + + +RG P
Sbjct: 89 EDRGITYLFPIQASTFNYIYDGEDVIGQARTGTGKTLSFALPLVEKLQDGKLSQKRGRAP 148
Query: 610 IALV 621
LV
Sbjct: 149 KVLV 152
>SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 480
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +2
Query: 368 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGW 481
++H P++ + FP Y + Y P P QA W
Sbjct: 6 DIHGPVRKLHKHGFPGYEEDYAAVFKYPTPWPEQAMEW 43
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 499 KEFIGVPKTGSGKTLAYILPAIVHINXQP 585
++ IG KTGSGKT A+ LP + + P
Sbjct: 45 RDCIGCAKTGSGKTAAFALPILQKLCDDP 73
>SB_6554| Best HMM Match : Isy1 (HMM E-Value=0)
Length = 675
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 278 FYDPHPTVLKRSPYEVEEYRNN--HEVTVSGVEVHNPIQYFEEANFPDY 418
+ D VL E EE NN H++ + + +HNP YFE+ + DY
Sbjct: 217 YRDEDDGVLVPIEQEAEEEVNNKLHKILIVNM-IHNPFNYFEKKSPTDY 264
>SB_51151| Best HMM Match : Vicilin_N (HMM E-Value=0.19)
Length = 493
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Frame = -3
Query: 171 YCHRCQIEKNYRRICCLL----QIWNHRFHGYYSSYQT*LFF 58
+CHR Q NY C ++ Q+W+H + SS ++ +F+
Sbjct: 178 FCHRQQYRHNYYNSCLVITFFRQMWDHLWANVGSSVESSVFY 219
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 499 KEFIGVPKTGSGKTLAYILPAIVHINXQP 585
K+ IG+ +TGSGKT A+ LP + + P
Sbjct: 2 KDVIGLAETGSGKTGAFALPILQALLDNP 30
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = +1
Query: 499 KEFIGVPKTGSGKTLAYILPAIVHINXQPPIRR---GDGPIALV 621
++ GV GSGK LAY+LP I I + +GP+ L+
Sbjct: 225 RDVAGVAIEGSGKRLAYLLPIIHQITESSVYQELPLANGPLVLI 268
>SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1281
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +1
Query: 505 FIGVPKTGSGKTLAYILPAIV 567
F+ +P TGSGK+L Y LPA+V
Sbjct: 38 FVSMP-TGSGKSLCYQLPAVV 57
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +2
Query: 344 HEVTVSGVEVHNPI---QYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMS 496
HEV V + +P+ + FEE +++GV MG+ +P+ IQ P+ ++
Sbjct: 86 HEVEVLRSDPSSPLYSAKSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLA 139
>SB_41425| Best HMM Match : DCX (HMM E-Value=8.6e-06)
Length = 1098
Score = 28.7 bits (61), Expect = 4.9
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = +2
Query: 407 FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLAYPKRVPAKRWPTSCQPL 565
+P+ + K G KE P AQ W I SG L Y K +P S +PL
Sbjct: 684 YPEVSLEVKKKKGSKEVWPSDAQMWVITQSG---LIYSKAMPQLALTRSERPL 733
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 520 KTGSGKTLAYILPAIVHINXQPPIRRG 600
+TGSGKTLAY+ P +VH + R G
Sbjct: 423 QTGSGKTLAYLAP-LVHRLREDEERHG 448
>SB_51035| Best HMM Match : Extensin_2 (HMM E-Value=0.33)
Length = 321
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +2
Query: 443 GYKEPTPIQAQGWPIAMSGKNLLAYPKRVPAKRWPTSCQPLC 568
G P+ G P+ SG P + A P+SCQP C
Sbjct: 152 GPASPSFGSVYGAPVQFSGMPSQCAPSCMAASPCPSSCQPTC 193
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 27.9 bits (59), Expect = 8.6
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = +1
Query: 499 KEFIGVPKTGSGKTLAYILP 558
K+ + + +TGSGKT A+++P
Sbjct: 319 KDVVAMARTGSGKTAAFLIP 338
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,367,930
Number of Sequences: 59808
Number of extensions: 464643
Number of successful extensions: 1206
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1194
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1877743452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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