Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0866
         (345 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   3.6  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   3.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   3.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   3.6  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    20   6.2  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    20   8.2  

>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +1

Query: 187 CTFGCCTLPRSIQVQDKEGALHCPEASTQANLFI 288
           C+ GC +L R   + DK         STQA  ++
Sbjct: 226 CSPGCFSLFRGKALMDKSVMKKYTTRSTQAKHYV 259


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +1

Query: 187 CTFGCCTLPRSIQVQDKEGALHCPEASTQANLFI 288
           C+ GC +L R   + DK         STQA  ++
Sbjct: 540 CSPGCFSLFRGKALMDKSVMKKYTTRSTQAKHYV 573


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +1

Query: 187 CTFGCCTLPRSIQVQDKEGALHCPEASTQANLFI 288
           C+ GC +L R   + DK         STQA  ++
Sbjct: 773 CSPGCFSLFRGKALMDKSVMKKYTTRSTQAKHYV 806


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +1

Query: 187 CTFGCCTLPRSIQVQDKEGALHCPEASTQANLFI 288
           C+ GC +L R   + DK         STQA  ++
Sbjct: 773 CSPGCFSLFRGKALMDKSVMKKYTTRSTQAKHYV 806


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 264 LYTGQFVYCGKKATLEVGNVMPV 332
           L+T +F +    ATL V N++ V
Sbjct: 468 LFTQKFTFVAGLATLSVLNLLSV 490


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +2

Query: 143 IKGVVKDIIHDPGRGAPL 196
           +  VVKD + DP    P+
Sbjct: 451 LASVVKDFVFDPTERTPV 468


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,869
Number of Sequences: 336
Number of extensions: 1539
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6770240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)