Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0865
         (559 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50741-4|CAO82050.1|  190|Caenorhabditis elegans Hypothetical pr...    30   1.3  
U40800-1|ABI18145.1|  150|Caenorhabditis elegans Hypothetical pr...    30   1.3  
Z81540-9|CAD89742.1|  740|Caenorhabditis elegans Hypothetical pr...    28   4.0  
L16621-11|AAA28226.2|  192|Caenorhabditis elegans Hypothetical p...    28   5.2  
AF000196-4|AAC24254.2|  429|Caenorhabditis elegans Hypothetical ...    27   9.1  

>Z50741-4|CAO82050.1|  190|Caenorhabditis elegans Hypothetical
           protein F55G7.4 protein.
          Length = 190

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 23/74 (31%), Positives = 35/74 (47%)
 Frame = +2

Query: 254 PDVPKINTPVLELSPRVLRKRKSLMPEKSKPSNRRVNMKPRKHVVAENANPKQIEALYLN 433
           P   K  +  L LSP++ R   S +    K S  +   K +  +  E  NP   E+L  N
Sbjct: 116 PSFSKTMSTNLHLSPKIRRSTSSCLRSSKKESLNKNLEKYKPDINTERNNPTSGESL-SN 174

Query: 434 KTVKSLSQTLETIY 475
           +  K+ S+TL TI+
Sbjct: 175 RKSKN-SKTLFTIW 187


>U40800-1|ABI18145.1|  150|Caenorhabditis elegans Hypothetical
           protein D2096.13 protein.
          Length = 150

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = -1

Query: 451 KRFNSFVEIQCLYLLWVRIFGDNVFTRFHIHSAV 350
           +RF SF+ I  ++ L V   GDNV T+FH++  +
Sbjct: 3   RRFTSFLCI--IFFLCVHSRGDNVLTKFHLNGTL 34


>Z81540-9|CAD89742.1|  740|Caenorhabditis elegans Hypothetical
           protein F46B3.17 protein.
          Length = 740

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 18/64 (28%), Positives = 29/64 (45%)
 Frame = +2

Query: 224 FRYNGSGRAEPDVPKINTPVLELSPRVLRKRKSLMPEKSKPSNRRVNMKPRKHVVAENAN 403
           FR       E +   +N   +  SP+ LR++  L P K++   RRV +KP K +  +   
Sbjct: 655 FRAEKEIARESEKKVVNLREIRRSPKKLRRK--LKPGKTEKKLRRVRVKPSKSLADQQRQ 712

Query: 404 PKQI 415
              I
Sbjct: 713 NSNI 716


>L16621-11|AAA28226.2|  192|Caenorhabditis elegans Hypothetical
           protein ZK688.1 protein.
          Length = 192

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
 Frame = +2

Query: 281 VLELSPRVLR---KRKSLMPEKSKPSNRRVNMKPRKHVVAENANPKQIE 418
           ++E+  R+ R   K  +++PE SKP+N  VN  P    +    +P+Q E
Sbjct: 56  IIEIEKRIERIEEKENNVLPEPSKPNNPVVN--PPVSPIQPKTDPEQSE 102


>AF000196-4|AAC24254.2|  429|Caenorhabditis elegans Hypothetical
           protein B0041.5 protein.
          Length = 429

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -1

Query: 199 HSTLECSMFFQRHISI*FFIMVP 131
           H T+EC ++  RH+    F   P
Sbjct: 156 HPTIECQLYLSRHVKYTLFFFAP 178


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,558,669
Number of Sequences: 27780
Number of extensions: 251658
Number of successful extensions: 758
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 758
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)