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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0864
         (766 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar...   106   3e-24
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ...    63   5e-11
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha...    50   3e-07
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil...    41   2e-04
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz...    40   4e-04
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c...    39   7e-04
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats...    36   0.008
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo...    34   0.026
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo...    33   0.034
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce...    32   0.10 
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy...    31   0.14 
SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyce...    29   0.55 
SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces pomb...    28   1.3  
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c...    27   2.2  
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha...    27   2.9  
SPAC1F12.10c |||NADPH-hemoprotein reductase |Schizosaccharomyces...    27   3.9  
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po...    26   5.1  
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo...    26   6.8  
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch...    25   9.0  

>SPBC530.10c |anc1||adenine nucleotide carrier
           Anc1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 322

 Score =  106 bits (255), Expect = 3e-24
 Identities = 52/84 (61%), Positives = 62/84 (73%), Gaps = 1/84 (1%)
 Frame = +2

Query: 260 DFLAGGISAAVSKTAVAPXESVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLS 436
           DF+ GG+SAAVSKTA AP E VKLL+Q Q  + +      RYKGI + F R   E+G++S
Sbjct: 30  DFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEGVIS 89

Query: 437 FWRGNFANVIRYFPTQALNFAFKD 508
            WRGN ANV+RYFPTQALNFAFKD
Sbjct: 90  LWRGNTANVLRYFPTQALNFAFKD 113



 Score = 42.7 bits (96), Expect = 6e-05
 Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
 Frame = +1

Query: 475 PDPGAQLRLQGQYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLA 654
           P        + ++K++F G   ++  + ++F             SL FVY LD+ARTRLA
Sbjct: 103 PTQALNFAFKDKFKKMF-GYKKERDGYAKWFAGNLASGGAAGAASLLFVYSLDYARTRLA 161

Query: 655 ADV--GKGDGQREFSGLGKLHQQ 717
            D    K  G+R+F+GL  ++++
Sbjct: 162 NDAKSAKKGGERQFNGLVDVYRK 184



 Score = 30.3 bits (65), Expect = 0.31
 Identities = 18/81 (22%), Positives = 36/81 (44%)
 Frame = +2

Query: 269 AGGISAAVSKTAVAPXESVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 448
           +GG + A S   V   +  +  L     S +   ++++ G+VD + +  +  GL   +RG
Sbjct: 138 SGGAAGAASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDGLRGLYRG 197

Query: 449 NFANVIRYFPTQALNFAFKDS 511
              +V+     + L F   D+
Sbjct: 198 FGPSVVGIVVYRGLYFGMYDT 218



 Score = 27.9 bits (59), Expect = 1.7
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +2

Query: 716 KIFKSDGLIGLYRXFG 763
           K ++SDGL GLYR FG
Sbjct: 184 KTYRSDGLRGLYRGFG 199


>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 317

 Score = 62.9 bits (146), Expect = 5e-11
 Identities = 31/78 (39%), Positives = 49/78 (62%)
 Frame = +2

Query: 266 LAGGISAAVSKTAVAPXESVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 445
           L+GG++A VS+TAV+P E +K++ QVQ+       ++ Y  +    V+I   +GL+ F+R
Sbjct: 25  LSGGVAATVSRTAVSPLERMKIIFQVQN-------NKEYTSLTSTLVKIWNREGLIGFFR 77

Query: 446 GNFANVIRYFPTQALNFA 499
           GN  N +R FP  A+ FA
Sbjct: 78  GNGTNCLRAFPYGAVQFA 95



 Score = 38.3 bits (85), Expect = 0.001
 Identities = 19/83 (22%), Positives = 39/83 (46%)
 Frame = +2

Query: 272 GGISAAVSKTAVAPXESVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 451
           GG +  + +T   P + ++   QV  +         YK I  A   I K +G+  F+RG 
Sbjct: 233 GGFTGIIGQTLTFPADVLRRRFQVNRIP---GIGHNYKNIKSAIFHIYKTEGINGFFRGY 289

Query: 452 FANVIRYFPTQALNFAFKDSTSR 520
            +N+++  P  ++ +   ++ S+
Sbjct: 290 SSNMLKIIPVMSITWYTYETVSK 312


>SPAC17H9.08 |||mitochondrial coenzyme A
           transporter|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 326

 Score = 50.4 bits (115), Expect = 3e-07
 Identities = 29/88 (32%), Positives = 44/88 (50%)
 Frame = +2

Query: 257 KDFLAGGISAAVSKTAVAPXESVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLS 436
           K  +AGG +  V+K+ VAP + VK+L Q  H S +  A  R+ G+  A   I    GL  
Sbjct: 19  KSGIAGGTAGCVAKSVVAPLDRVKILYQTNHASYRGYAYSRH-GLYKAIKHIYHVYGLHG 77

Query: 437 FWRGNFANVIRYFPTQALNFAFKDSTSR 520
            ++G+ A + R FP   + F   +   R
Sbjct: 78  LYQGHTATLYRVFPYAGIKFVAYEQVRR 105


>SPBC12D12.05c |||mitochondrial carrier, calcium binding
           subfamily|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 426

 Score = 41.1 bits (92), Expect = 2e-04
 Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
 Frame = +2

Query: 224 NVEPRRSGRVPKDFLA--GGISAAVSKTAVAPXESVKLLLQVQHVSKQIAADQRYKGIVD 397
           NV+P+   ++P   +   G +S +   T V P   ++  LQ Q  S   A    Y G +D
Sbjct: 325 NVDPQ-DVKLPNGLVMAFGALSGSTGATIVFPLNVIRTRLQTQGTSAHPAT---YDGFID 380

Query: 398 AFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 496
            F +  K +G    ++G   N+++  P+ A+++
Sbjct: 381 CFYKTTKNEGFRGLYKGLSPNLLKVAPSVAISY 413



 Score = 34.7 bits (76), Expect = 0.015
 Identities = 22/96 (22%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
 Frame = +2

Query: 263 FLAGGISAAVSKTAVAPXESVKLLLQVQHVSKQIAADQRYKGIVDAFVR-IPKEQGLLSF 439
           +LAGG++ +V++  + P +++K  +Q   +S+     Q  K I+ +  + + K  G+  +
Sbjct: 232 YLAGGMAGSVAQMFIYPVDTLKFRIQCSDLSR----GQHGKSIILSNAKELYKSVGIRGY 287

Query: 440 WRGNFANVIRYFPTQALNFAFKDSTSRCSSAALTRR 547
           +RG    ++  FP  A +    +   R     L  R
Sbjct: 288 YRGVLVGILGMFPYSATDLGTFEGLKRTWIGILASR 323


>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 298

 Score = 39.9 bits (89), Expect = 4e-04
 Identities = 29/107 (27%), Positives = 46/107 (42%)
 Frame = +2

Query: 254 PKDFLAGGISAAVSKTAVAPXESVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLL 433
           P  F AG ++       + P + VK  +Q+  V K       Y G  D   +I K +G  
Sbjct: 9   PVTFAAGAVAGISEVLTLYPLDVVKTRMQLS-VGKS-----DYNGTFDCLKKIVKNEGPH 62

Query: 434 SFWRGNFANVIRYFPTQALNFAFKDSTSRCSSAALTRRRSSGVTSLV 574
             +RG    ++   P +AL FA  D+ S+       R+ SS   S++
Sbjct: 63  RLYRGILPPILMEAPKRALKFASNDTYSKLWRKVFKRKDSSPALSIL 109



 Score = 33.5 bits (73), Expect = 0.034
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
 Frame = +2

Query: 221 QNVEPRRSGRVPKDFLAGGISAAVSKTAVAPXESVKLLLQ-VQHVSKQIAADQRYKGIVD 397
           + V  R+        L G  +       V P E +K+ LQ V++ SK       Y G VD
Sbjct: 94  RKVFKRKDSSPALSILTGSCAGFTETFVVVPFELMKIRLQDVKNASK-------YNGTVD 146

Query: 398 AFVRIPKEQGLLSFWRGNFANVIRY 472
            F +I K++ +L+ + G  A + R+
Sbjct: 147 CFTKIVKQERILALYNGFEATMWRH 171



 Score = 29.5 bits (63), Expect = 0.55
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +1

Query: 619 VYPLDFARTRLAADVGKGDGQREFSGLGKL 708
           +YPLD  +TR+   VGK D    F  L K+
Sbjct: 26  LYPLDVVKTRMQLSVGKSDYNGTFDCLKKI 55


>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 303

 Score = 39.1 bits (87), Expect = 7e-04
 Identities = 23/78 (29%), Positives = 42/78 (53%)
 Frame = +2

Query: 266 LAGGISAAVSKTAVAPXESVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 445
           ++GG+S A++ +   P + VK LLQ +  S  I   ++ KG +D    I    G+ SF++
Sbjct: 209 ISGGLSGAIASSLTTPLDVVKTLLQTRG-SSSIPEVRKCKGSLDVVRFIYNYGGIPSFFK 267

Query: 446 GNFANVIRYFPTQALNFA 499
           G    ++   P  A+++A
Sbjct: 268 GIRPRMVVAMPATAVSWA 285


>SPAC4G9.20c |||mitochondrial carrier with solute carrier
           repeats|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 302

 Score = 35.5 bits (78), Expect = 0.008
 Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
 Frame = +2

Query: 257 KDFLAGGISAAVSKTAVA-PXESVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLL 433
           KDFLAG +S  V++  V  P + VK+ LQ Q     I     Y   +D   +I K +GL 
Sbjct: 19  KDFLAG-VSGGVAQVLVGQPFDCVKVRLQSQSNVSPI-----YNNALDCVKKISKNEGLA 72

Query: 434 SFWRG 448
           +F++G
Sbjct: 73  AFYKG 77


>SPAC19G12.05 |||mitochondrial citrate
           transporter|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 291

 Score = 33.9 bits (74), Expect = 0.026
 Identities = 17/62 (27%), Positives = 30/62 (48%)
 Frame = +2

Query: 263 FLAGGISAAVSKTAVAPXESVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 442
           FL G ++  ++     P ++VK  +Q       ++A + YK  +    +I  + GLL FW
Sbjct: 207 FLVGSVAGIITVYCTQPIDTVKSRMQ------SLSASKEYKNSIHCAYKILTQDGLLRFW 260

Query: 443 RG 448
            G
Sbjct: 261 SG 262


>SPBC1604.04 |||thiamine pyrophosphate
           transporter|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 314

 Score = 33.5 bits (73), Expect = 0.034
 Identities = 20/77 (25%), Positives = 36/77 (46%)
 Frame = +2

Query: 266 LAGGISAAVSKTAVAPXESVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 445
           LAGGIS+ + +  +AP + +K+ +Q+   S           +   F    +++G+ + WR
Sbjct: 21  LAGGISSVICRFMIAPFDVIKIRMQITQSS-----------LRPVFKETVQKEGVRALWR 69

Query: 446 GNFANVIRYFPTQALNF 496
           GN    + Y    A  F
Sbjct: 70  GNVVAELLYLVYGAAEF 86



 Score = 27.9 bits (59), Expect = 1.7
 Identities = 19/71 (26%), Positives = 32/71 (45%)
 Frame = +2

Query: 266 LAGGISAAVSKTAVAPXESVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 445
           L+G I+ A SK  + P ++V   LQ             YK   D F+ I +  G+   +R
Sbjct: 197 LSGVIAGAGSKAIMFPVDTVVKTLQT--------FPSNYKSFKDCFLSIYRNSGIKGLYR 248

Query: 446 GNFANVIRYFP 478
           G   ++++  P
Sbjct: 249 GLSVSMLKVAP 259


>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 371

 Score = 31.9 bits (69), Expect = 0.10
 Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
 Frame = +2

Query: 257 KDFLAGGISAAVSKTAVAPXESVKLLLQVQHVSKQIAADQR---YKGIVDAFVRIPKEQG 427
           KD +AGG +   S   VAP + VK   Q Q         +      G + +   I   +G
Sbjct: 7   KDAIAGGAAGLASSLVVAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEG 66

Query: 428 LLSFWRGNFANVIRYFPTQALNF 496
           +   +RG    ++ Y P+ ++ F
Sbjct: 67  IAGLYRGVGPMMLGYLPSWSIYF 89



 Score = 28.7 bits (61), Expect = 0.96
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +2

Query: 365 AADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 463
           A    Y    DAF +I K +GL +F+RG F ++
Sbjct: 225 ACSPAYNNTFDAFRKIYKYEGLAAFYRGLFPSL 257


>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 361

 Score = 31.5 bits (68), Expect = 0.14
 Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 12/90 (13%)
 Frame = +2

Query: 263 FLAGGISAAVSKTAVAPXESVKLLLQVQHVS----KQIAADQ-----RYKGIVDAFV--- 406
           F+AGG++  +   A AP + VK  LQ         KQ A  +      Y+  +D  +   
Sbjct: 52  FIAGGVAGMLGAIATAPLDVVKTRLQSDFYKDRFLKQTAKSKSPLTAAYRHFMDTCIILK 111

Query: 407 RIPKEQGLLSFWRGNFANVIRYFPTQALNF 496
            +   +G  + +RG   N+I   P +++NF
Sbjct: 112 NVKVHEGTRALFRGLGPNLIGTIPARSINF 141



 Score = 31.5 bits (68), Expect = 0.14
 Identities = 19/74 (25%), Positives = 35/74 (47%)
 Frame = +2

Query: 275 GISAAVSKTAVAPXESVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 454
           GI+  ++     P E V+  L+    S  I    +Y G++  F  +  EQG++  + G  
Sbjct: 280 GIAKFMAAGIAYPHEVVRTRLRQ---SPSINGTPKYTGLIQCFKLVWMEQGIVGLYGGLT 336

Query: 455 ANVIRYFPTQALNF 496
           A+++R  P   + F
Sbjct: 337 AHLLRVVPNACILF 350


>SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 604

 Score = 29.5 bits (63), Expect = 0.55
 Identities = 19/53 (35%), Positives = 23/53 (43%)
 Frame = -1

Query: 685 HAGHRPYRHRRRDGYVRSRGGTRSTERWLRRHHRRPDYQRSNARTASSCQRRR 527
           H    P R R RD   RS   +RS     R  HR  DY RS   ++   + RR
Sbjct: 140 HQSRSPVRSRDRD---RSSRSSRSRHPSSRSRHRYDDYSRSPPYSSRHSRSRR 189


>SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 710

 Score = 28.3 bits (60), Expect = 1.3
 Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 3/76 (3%)
 Frame = +2

Query: 257 KDFLAGGISAAVSKT--AVAPXESVKLLLQVQHVSK-QIAADQRYKGIVDAFVRIPKEQG 427
           KD L GG +  V K      P  ++   +QV    K + A     K + D  +      G
Sbjct: 167 KDHLVGGCADGVIKVWDLSTPNSAIISRMQVDRARKGEAALIWAVKSLRDGTIVSADSSG 226

Query: 428 LLSFWRGNFANVIRYF 475
            + FW G F  + + F
Sbjct: 227 AVKFWNGKFFTLSQSF 242


>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 320

 Score = 27.5 bits (58), Expect = 2.2
 Identities = 33/154 (21%), Positives = 55/154 (35%), Gaps = 2/154 (1%)
 Frame = +2

Query: 308 APXESVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQA 487
           +P   VK  +Q       +     YK I +AF RI KE G+   + G  A ++R     +
Sbjct: 147 SPFFLVKTRMQSYSPKFPVGQQYGYKHIFNAFSRIIKENGVKGLFVGADAAILRTVSGSS 206

Query: 488 LNFAFKDSTSRCSSA--ALTRRRSSGVTSLVIWXXXXXXXXXLCASCTXXXXXXXXXXXX 661
           +     +   R       L       +T+  +          +C  CT            
Sbjct: 207 VQLPIYNWAKRMIEHYNLLEEGMIKHLTASAV------SGFGVC--CTMQIFDTVMTRMY 258

Query: 662 XXRAMASVNSPVSENCISKIFKSDGLIGLYRXFG 763
             +      +P+  +CI K  +S+G   LY+ FG
Sbjct: 259 NQKNKELYKNPI--DCILKTIRSEGFFALYKGFG 290


>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
           homolog|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 338

 Score = 27.1 bits (57), Expect = 2.9
 Identities = 9/15 (60%), Positives = 14/15 (93%)
 Frame = +2

Query: 719 IFKSDGLIGLYRXFG 763
           ++KS+GL+GL+R FG
Sbjct: 291 LYKSEGLLGLFRGFG 305


>SPAC1F12.10c |||NADPH-hemoprotein reductase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 147

 Score = 26.6 bits (56), Expect = 3.9
 Identities = 19/70 (27%), Positives = 33/70 (47%)
 Frame = +2

Query: 176 TPTSTYSPSEDHIIEQNVEPRRSGRVPKDFLAGGISAAVSKTAVAPXESVKLLLQVQHVS 355
           TP    SP+  ++     +PRR  RV K ++A G S       VA  +++  + +   V+
Sbjct: 17  TPQIRISPASSNVEHSEKQPRRDFRV-KKYVAPGFSQLNWSKLVASGQNLSGVEKPIPVT 75

Query: 356 KQIAADQRYK 385
           K+  A  + K
Sbjct: 76  KEELAKHKTK 85


>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 897

 Score = 26.2 bits (55), Expect = 5.1
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +2

Query: 101 YEITPNLLFKNQELVFRDPPSACAATPTSTY 193
           YE+  N  F N       PP AC+   TS Y
Sbjct: 362 YEMKQNDAFNNNNPATATPPPACSLLETSWY 392


>SPBC29A3.11c |||mitochondrial carboxylic acid
           transporter|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 297

 Score = 25.8 bits (54), Expect = 6.8
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 686 NSPVSENCISKIFKSDGLIGLYR 754
           N P   +C     K++GL GLYR
Sbjct: 49  NFPTIRSCFQNAVKNEGLKGLYR 71


>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 271

 Score = 25.4 bits (53), Expect = 9.0
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +2

Query: 389 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPT 481
           +++    + + +GL  F+RG +  V  Y PT
Sbjct: 119 VINTISTLARSEGLKGFYRGYWMGVAIYLPT 149


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,781,483
Number of Sequences: 5004
Number of extensions: 53543
Number of successful extensions: 181
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 177
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 367316502
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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