Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0863
(493 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0664 - 19677371-19677393,19678071-19678173,19678397-196784... 37 0.008
01_02_0071 + 10822008-10822011,10822219-10822364,10822452-108225... 37 0.010
01_01_1054 + 8330081-8330137,8330229-8330321,8330445-8330504,833... 36 0.013
03_06_0627 - 35172246-35172349,35172903-35173005,35173107-351731... 36 0.023
05_01_0252 - 1914060-1914142,1914243-1914345,1914516-1914599,191... 34 0.071
06_03_0397 + 20370146-20370256,20371223-20371312,20371411-203714... 33 0.094
05_02_0097 - 6573093-6573254,6573297-6573398,6573922-6574005,657... 33 0.16
02_02_0200 - 7718760-7718816,7718910-7719011,7719643-7719726,771... 33 0.16
01_01_0747 - 5773771-5773863,5773960-5774061,5774527-5774610,577... 33 0.16
05_06_0015 + 24953918-24954359,24955622-24955857,24955945-249560... 29 1.5
04_04_1658 - 35119623-35119754,35121033-35121121,35121205-351215... 29 2.0
09_02_0157 + 5083771-5083996,5084007-5084326,5085958-5086392,508... 29 2.7
08_01_0070 + 490655-493165 28 3.5
05_07_0200 - 28368890-28369021,28369169-28369303,28369918-283699... 27 8.2
>10_08_0664 -
19677371-19677393,19678071-19678173,19678397-19678480,
19678557-19678652,19678735-19678785,19679043-19679183,
19679258-19679314,19679559-19679633,19679737-19680009,
19680114-19680173,19680513-19680605,19680692-19680946,
19681832-19681891
Length = 456
Score = 37.1 bits (82), Expect = 0.008
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +2
Query: 332 ISSKDGSKVTTVVATP--GQGPDRPQXVSYADMKXIGNGXFXVVYQXKLCDTGELI 493
I + +G++ ++ T GQ Q VSY + +G G F VV+Q K +TGE +
Sbjct: 111 IVNANGTETGQIIVTSIGGQNGKPKQKVSYMAERVVGTGSFGVVFQAKCLETGETV 166
>01_02_0071 +
10822008-10822011,10822219-10822364,10822452-10822544,
10822722-10822781,10822855-10823127,10823229-10823303,
10823419-10823475,10823593-10823733,10823813-10823863,
10823905-10823955,10823956-10824051,10824159-10824242,
10824330-10824432,10824518-10824600
Length = 438
Score = 36.7 bits (81), Expect = 0.010
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 362 TVVATPGQGPDRP-QXVSYADMKXIGNGXFXVVYQXKLCDTGELI 493
T+V T G +P Q +SY + +G G F VV+Q K +TGE +
Sbjct: 67 TIVTTVGGRNGQPKQTISYIAERAVGRGSFGVVFQAKCLETGERV 111
>01_01_1054 +
8330081-8330137,8330229-8330321,8330445-8330504,
8330703-8330975,8331107-8331181,8331269-8331325,
8331409-8331549,8331656-8331706,8331795-8331944,
8331974-8332057,8332171-8332273,8332451-8332527,
8333469-8333704,8334000-8334078,8335123-8335218,
8335735-8335828,8336325-8336423,8336663-8337453
Length = 871
Score = 36.3 bits (80), Expect = 0.013
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +2
Query: 365 VVATPGQGPDRPQXVSYADMKXIGNGXFXVVYQXKLCDTGELI 493
V T G+ Q VSY + +G G F +V+Q K +TGE +
Sbjct: 38 VTTTGGRNGQPKQTVSYMAERIVGQGSFGIVFQAKCLETGETV 80
>03_06_0627 -
35172246-35172349,35172903-35173005,35173107-35173190,
35173504-35173599,35173686-35173736,35173805-35173945,
35174098-35174154,35175089-35175163,35176255-35176527,
35176608-35176667,35176754-35176846,35177196-35177348
Length = 429
Score = 35.5 bits (78), Expect = 0.023
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Frame = +2
Query: 308 KPPLGGVKISSKD---GSKVTT--VVATPGQGPDR--PQXVSYADMKXIGNGXFXVVYQX 466
KP +G K + +D GS ++AT +G + Q V+Y +G G F VVYQ
Sbjct: 44 KPDVGDEKNTERDVVDGSSAEAGHIIATTIRGRNGLPKQSVTYIAEHVVGTGSFGVVYQA 103
Query: 467 KLCDTGELI 493
K +TGE++
Sbjct: 104 KCRETGEIV 112
>05_01_0252 -
1914060-1914142,1914243-1914345,1914516-1914599,
1914687-1914782,1914859-1914909,1915001-1915141,
1915221-1915277,1915396-1915470,1915556-1915828,
1915935-1915994,1916109-1916201,1916281-1916400
Length = 411
Score = 33.9 bits (74), Expect = 0.071
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 365 VVATPGQGPDRPQXVSYADMKXIGNGXFXVVYQXKLCDTGELI 493
V + G+ Q +SY + +G+G F V+Q K +TGE +
Sbjct: 59 VTSIDGRNGQAKQTISYMAERVVGHGSFGTVFQAKCLETGETV 101
>06_03_0397 +
20370146-20370256,20371223-20371312,20371411-20371470,
20371553-20371825,20371917-20371991,20372074-20372130,
20372820-20372960,20373066-20373116,20373194-20373289,
20373482-20373565,20375739-20375840,20376260-20376331
Length = 403
Score = 33.5 bits (73), Expect = 0.094
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +2
Query: 347 GSKVTTVVATPGQGPDRPQXVSYADMKXIGNGXFXVVYQXKLCDTGELI 493
G ++T + P R +SY + +G G F VV+Q K +TGE +
Sbjct: 51 GHIISTTIGGKNDEPKRT--ISYMAERVVGTGSFGVVFQAKCLETGETV 97
>05_02_0097 -
6573093-6573254,6573297-6573398,6573922-6574005,
6574190-6574285,6574373-6574423,6574537-6574677,
6575025-6575081,6575163-6575237,6575323-6575595,
6575689-6575748,6576184-6576285,6576377-6576451
Length = 425
Score = 32.7 bits (71), Expect = 0.16
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +2
Query: 347 GSKVTTVVATPGQGPDRPQXVSYADMKXIGNGXFXVVYQXKLCDTGELI 493
G ++T + G+ + + +SY + +G G F +V+Q K +TGE +
Sbjct: 43 GHIISTTIG--GKNGEPKRTISYMAERVVGTGSFGIVFQAKCLETGETV 89
>02_02_0200 -
7718760-7718816,7718910-7719011,7719643-7719726,
7719821-7719916,7720016-7720066,7720162-7720302,
7720717-7720773,7720864-7720938,7721033-7721305,
7721382-7721441,7721531-7721620,7722519-7722638
Length = 401
Score = 32.7 bits (71), Expect = 0.16
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +2
Query: 347 GSKVTTVVATPGQGPDRPQXVSYADMKXIGNGXFXVVYQXKLCDTGELI 493
G ++T + G+ + + +SY + +G G F +V+Q K +TGE +
Sbjct: 54 GHIISTTIG--GKNGEPKRTISYMAERVVGTGSFGIVFQAKCLETGETV 100
>01_01_0747 -
5773771-5773863,5773960-5774061,5774527-5774610,
5774777-5774872,5774950-5775000,5775105-5775245,
5775704-5775760,5775845-5775919,5776005-5776277,
5776371-5776430,5776969-5777061,5777227-5777298
Length = 398
Score = 32.7 bits (71), Expect = 0.16
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +2
Query: 347 GSKVTTVVATPGQGPDRPQXVSYADMKXIGNGXFXVVYQXKLCDTGELI 493
G ++T + G+ + + +SY + +G G F +V+Q K +TGE +
Sbjct: 39 GHIISTTIG--GKNGEPKRTISYMAERVVGTGSFGIVFQAKCLETGETV 85
>05_06_0015 +
24953918-24954359,24955622-24955857,24955945-24956085,
24956188-24956619,24956847-24956948
Length = 450
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/46 (30%), Positives = 18/46 (39%)
Frame = -3
Query: 404 PEAGQGPAPASLXQSXPLSRPCC*FLRLREVVLEVDCRKSFERICC 267
P G GP SL P CC R+ + L C + +CC
Sbjct: 349 PSPGPGPTKCSLLTYCPEGSTCCCSWRVLGLCLSWSCCELDNAVCC 394
>04_04_1658 -
35119623-35119754,35121033-35121121,35121205-35121599,
35122009-35122091,35122163-35124184,35124859-35124927,
35125050-35125130,35125215-35125308,35125435-35125499,
35125961-35126038,35126115-35126360
Length = 1117
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = -3
Query: 299 DCRKSFERICCPRRMRGPRASAHY 228
+CR+ F RIC RRMR P+A HY
Sbjct: 649 ECRRYFSRICQDRRMR-PKAE-HY 670
>09_02_0157 +
5083771-5083996,5084007-5084326,5085958-5086392,
5087277-5087921
Length = 541
Score = 28.7 bits (61), Expect = 2.7
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 322 SERWFWRLIVESLSNGFAALGEC 254
++ WFWR V++ SNG A +C
Sbjct: 519 AQHWFWRRFVDTASNGEQAKLDC 541
>08_01_0070 + 490655-493165
Length = 836
Score = 28.3 bits (60), Expect = 3.5
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = +2
Query: 302 PPKPPLGGVKISSKDGSKVTTVVATPGQGPDRPQXVSYADMKXIGNGXFXVVYQXKLCDT 481
PP PPLG + + K+ S++T +A+ + IG+G F VY+ KL D
Sbjct: 458 PPPPPLGCEEFTVKELSRLTN---------------GFAEERKIGSGSFGSVYRAKLPDG 502
Query: 482 GEL 490
E+
Sbjct: 503 REV 505
>05_07_0200 -
28368890-28369021,28369169-28369303,28369918-28369947,
28370019-28370093,28370222-28370333,28370440-28370621,
28370723-28370854,28372193-28373479
Length = 694
Score = 27.1 bits (57), Expect = 8.2
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 302 PPKPPLGGVKISSKDGSKVTTVVATPGQGP 391
PP PP K +S+ + TT + P GP
Sbjct: 342 PPPPPPPAAKRTSRTSTPATTSSSAPASGP 371
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,370,680
Number of Sequences: 37544
Number of extensions: 185918
Number of successful extensions: 630
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 630
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1023611560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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