Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0862
(816 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase su... 164 6e-41
AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical ... 63 3e-10
AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical ... 63 3e-10
U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpa... 48 8e-06
AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily a... 48 1e-05
AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical ... 47 1e-05
AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical ... 37 0.015
Z70684-5|CAA94600.1| 233|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z70684-3|CAA94598.1| 233|Caenorhabditis elegans Hypothetical pr... 29 4.0
U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin rec... 28 7.0
AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-l... 28 7.0
U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical pr... 28 9.2
>U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase
subunit protein 2 protein.
Length = 538
Score = 164 bits (399), Expect = 6e-41
Identities = 83/104 (79%), Positives = 88/104 (84%), Gaps = 3/104 (2%)
Frame = +3
Query: 207 ICSLLMP--KEERLGCLA-SGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYH 377
+ LL P K ++G +GVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYH
Sbjct: 198 VVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYH 257
Query: 378 EMIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEY 509
EMIE GVI LK K SKV+LVYGQMNEPPGARARV LTGLTVAEY
Sbjct: 258 EMIEGGVIDLKGKNSKVSLVYGQMNEPPGARARVCLTGLTVAEY 301
Score = 147 bits (357), Expect = 7e-36
Identities = 70/84 (83%), Positives = 76/84 (90%)
Frame = +2
Query: 2 QPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQXEI 181
QPV D+G PI+IPVG ETLGRI+NVIGEPIDERGPI + AAIHAEAPEFV+MSV+ EI
Sbjct: 132 QPVADTGDPIKIPVGPETLGRIMNVIGEPIDERGPIASKNFAAIHAEAPEFVEMSVEQEI 191
Query: 182 LVTGIKVVDLLAPYAKGGKIGLFG 253
LVTGIKVVDLLAPYAKGGKIGLFG
Sbjct: 192 LVTGIKVVDLLAPYAKGGKIGLFG 215
Score = 144 bits (349), Expect = 7e-35
Identities = 76/102 (74%), Positives = 77/102 (75%)
Frame = +2
Query: 509 FRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKKG 688
FRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG+MQERITTTKKG
Sbjct: 302 FRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERITTTKKG 361
Query: 689 SITSVQAIYVXXXXXXXXXXXXXXXXXXXXXYSSRAIAELGI 814
SITSVQAIYV SR IAEL I
Sbjct: 362 SITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELAI 403
>AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical
protein H28O16.1d protein.
Length = 511
Score = 62.9 bits (146), Expect = 3e-10
Identities = 27/80 (33%), Positives = 47/80 (58%)
Frame = +2
Query: 17 SGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQXEILVTGI 196
+G+ + +PVG LGR+++ +G PID +GPI + + + +AP + E +VTG+
Sbjct: 92 TGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGV 151
Query: 197 KVVDLLAPYAKGGKIGLFGE 256
K VD L P +G + + G+
Sbjct: 152 KAVDSLVPIGRGQRELIIGD 171
>AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical
protein H28O16.1a protein.
Length = 538
Score = 62.9 bits (146), Expect = 3e-10
Identities = 27/80 (33%), Positives = 47/80 (58%)
Frame = +2
Query: 17 SGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQXEILVTGI 196
+G+ + +PVG LGR+++ +G PID +GPI + + + +AP + E +VTG+
Sbjct: 119 TGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGV 178
Query: 197 KVVDLLAPYAKGGKIGLFGE 256
K VD L P +G + + G+
Sbjct: 179 KAVDSLVPIGRGQRELIIGD 198
>U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpase
protein 12 protein.
Length = 491
Score = 48.0 bits (109), Expect = 8e-06
Identities = 25/78 (32%), Positives = 41/78 (52%)
Frame = +2
Query: 17 SGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQXEILVTGI 196
+G +R PV + LGRI N G+PID+ P+ + I+ + E++ TGI
Sbjct: 97 TGDILRTPVSEDMLGRIFNGSGKPIDKGPPVLAEDFLDINGQPINPWSRIYPEEMIQTGI 156
Query: 197 KVVDLLAPYAKGGKIGLF 250
+D++ A+G KI +F
Sbjct: 157 SAIDVMNSIARGQKIPIF 174
Score = 31.5 bits (68), Expect = 0.75
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +2
Query: 533 VLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSV 703
VL+ + ++ + +A EVSA +P G+ + TD+ T+ ER + GSIT +
Sbjct: 273 VLVVLTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRDGSITQI 331
>AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily
assigned gene nameprotein 300 protein.
Length = 501
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/78 (32%), Positives = 41/78 (52%)
Frame = +2
Query: 17 SGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQXEILVTGI 196
+G R PV + LGRI N G+PID+ P+ + I+ + + E++ TGI
Sbjct: 109 TGDIFRSPVSLDMLGRIFNGSGKPIDKGPPVLPEDYLDINGQPINPFNRIYPEEMIQTGI 168
Query: 197 KVVDLLAPYAKGGKIGLF 250
+D++ A+G KI +F
Sbjct: 169 SAIDVMNSIARGQKIPIF 186
Score = 35.5 bits (78), Expect = 0.046
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +2
Query: 524 GQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTK--KGSIT 697
G+ VL+ + ++ + +A E+SA +P G+ + TD+ T+ ER K +GSIT
Sbjct: 282 GKHVLVVLTDMSSYAEALREISAAREEVPGRRGFPGYMYTDLATIYERAGRVKGREGSIT 341
Query: 698 SV 703
+
Sbjct: 342 QI 343
>AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical
protein H28O16.1c protein.
Length = 503
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/61 (34%), Positives = 34/61 (55%)
Frame = +2
Query: 74 VIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQXEILVTGIKVVDLLAPYAKGGKIGLFG 253
V+G PID +GPI + + + +AP + E +VTG+K VD L P +G + + G
Sbjct: 103 VLGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIG 162
Query: 254 E 256
+
Sbjct: 163 D 163
>AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical
protein Y49A3A.2 protein.
Length = 606
Score = 37.1 bits (82), Expect = 0.015
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Frame = +2
Query: 509 FRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTK-- 682
FRD G +V + D+ R+ +A E+S LG +P+ GY LA + + ER K
Sbjct: 326 FRDM-GLNVAMMADSTSRWAEALREISGRLGEMPADSGYPAYLAARLASFYERAGRVKCL 384
Query: 683 -----KGSITSVQAI 712
+GS+T V A+
Sbjct: 385 GSPEREGSVTIVGAV 399
Score = 35.1 bits (77), Expect = 0.061
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Frame = +3
Query: 252 ASGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVISLKDKTS--- 422
A G GKTV+ L ++ ++ G GER E +++ + E + TS
Sbjct: 240 AFGCGKTVISQSLSKY---SNSDAIIYVGCGERGNEMSEVLRDFPELTMEVEGVTTSIMK 296
Query: 423 KVALVYGQMNEPPGARARVALTGLTVAEY 509
+ ALV N P AR TG+T+AEY
Sbjct: 297 RTALVANTSNMPVAAREASIYTGITLAEY 325
>Z70684-5|CAA94600.1| 233|Caenorhabditis elegans Hypothetical
protein F28D1.5 protein.
Length = 233
Score = 29.1 bits (62), Expect = 4.0
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2
Query: 260 CGQNCIDYGTDQQCCQSPW 316
C C+ Y TDQ+CC+ +
Sbjct: 168 CKSGCLGYNTDQECCRGAY 186
>Z70684-3|CAA94598.1| 233|Caenorhabditis elegans Hypothetical
protein F28D1.3 protein.
Length = 233
Score = 29.1 bits (62), Expect = 4.0
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2
Query: 260 CGQNCIDYGTDQQCCQSPW 316
C C+ Y TDQ+CC+ +
Sbjct: 168 CKSGCLGYNTDQECCRGAY 186
>U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin
receptor protein 2 protein.
Length = 1338
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +3
Query: 318 GYSVFAGVGERTREGNDLYHEMIESGVI--SLKDKTSKVAL 434
GY FAG G+ ND H +I S VI S+++ T V L
Sbjct: 780 GYYAFAGFGQLLNNNND--HTLINSQVIGASIQNATQSVTL 818
>AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-like
protein LAT-2 protein.
Length = 1338
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +3
Query: 318 GYSVFAGVGERTREGNDLYHEMIESGVI--SLKDKTSKVAL 434
GY FAG G+ ND H +I S VI S+++ T V L
Sbjct: 780 GYYAFAGFGQLLNNNND--HTLINSQVIGASIQNATQSVTL 818
>U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical
protein T10F2.4 protein.
Length = 492
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -3
Query: 715 INSL-YRCDGTFLGGGNSFLHSTHVSSQSRLISYS 614
INSL + GTFLG G + HV S S ++S S
Sbjct: 426 INSLSFDMTGTFLGIGGQKVQVLHVKSWSEVVSLS 460
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,471,348
Number of Sequences: 27780
Number of extensions: 387466
Number of successful extensions: 1155
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1153
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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