Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0861
         (634 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D9D4DF Cluster: PREDICTED: similar to CXXC finge...    35   1.9  
UniRef50_Q17WP0 Cluster: Outer membrane protein 19; n=5; Helicob...    34   3.3  
UniRef50_A7GGR6 Cluster: Polysaccharide biosynthesis protein; n=...    33   4.3  
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    33   5.7  
UniRef50_Q2AID2 Cluster: Putative uncharacterized protein precur...    32   10.0 
UniRef50_Q38DG8 Cluster: Putative uncharacterized protein; n=1; ...    32   10.0 

>UniRef50_UPI0000D9D4DF Cluster: PREDICTED: similar to CXXC finger
           6; n=2; Catarrhini|Rep: PREDICTED: similar to CXXC
           finger 6 - Macaca mulatta
          Length = 338

 Score = 34.7 bits (76), Expect = 1.9
 Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
 Frame = -3

Query: 170 RLPHPSNRNALLL----DGRNRQGGGP--TADLSARTHKTSYQQYFITLLAVHGXLRAHL 9
           R+PHP++          +G   +GGGP  TA  S +T +  YQ+  +T L  H  L AHL
Sbjct: 53  RVPHPASPAPAAAPPEGEGGQPEGGGPCSTAFSSVQTLEEKYQEKLLTQLCPHHTLPAHL 112


>UniRef50_Q17WP0 Cluster: Outer membrane protein 19; n=5;
           Helicobacter|Rep: Outer membrane protein 19 -
           Helicobacter acinonychis (strain Sheeba)
          Length = 216

 Score = 33.9 bits (74), Expect = 3.3
 Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = -1

Query: 523 FF*SFQEKTHT*SLLNNKI-DRFMNFGSKLLNAVGRNTYTRTIGRFSVKKRKVVI 362
           FF   Q   +T  LLNNK+ D  +N  + L +   RNTY R IG F V+ R +V+
Sbjct: 127 FFFGLQLAANT-WLLNNKVKDLVVNTWNSLKDFNFRNTYFRAIGVFGVQFRTIVL 180


>UniRef50_A7GGR6 Cluster: Polysaccharide biosynthesis protein; n=4;
           Clostridium botulinum|Rep: Polysaccharide biosynthesis
           protein - Clostridium botulinum (strain Langeland / NCTC
           10281 / Type F)
          Length = 476

 Score = 33.5 bits (73), Expect = 4.3
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = +3

Query: 327 NYFFVNTKLNNFITTLRFLTLNLPIVLVYVFLPTAF 434
           N F V+ K   ++  L+FLT+ L I+L Y+FL   F
Sbjct: 352 NVFIVSNKKQMYLIFLQFLTIILSIILNYIFLKLGF 387


>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 33.1 bits (72), Expect = 5.7
 Identities = 15/25 (60%), Positives = 18/25 (72%)
 Frame = -1

Query: 307 FFIALWGDELTAYLVLSGTAAHRHL 233
           F +  W DELTA+LVLSG  + RHL
Sbjct: 154 FLLLRWVDELTAHLVLSGYWSPRHL 178


>UniRef50_Q2AID2 Cluster: Putative uncharacterized protein
           precursor; n=2; Clostridia|Rep: Putative uncharacterized
           protein precursor - Halothermothrix orenii H 168
          Length = 583

 Score = 32.3 bits (70), Expect = 10.0
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
 Frame = +3

Query: 330 YFFVNTKLNNFITTLRFLTLNLPIVLVYVFLPTAF--SNFDPKFIK 461
           YFF  +K    +TT RFL  NL + L+++ +P  +   NF+   +K
Sbjct: 100 YFFFLSKGTETVTTSRFLAFNLALYLLFLVIPYFYKRENFELYVVK 145


>UniRef50_Q38DG8 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma brucei|Rep: Putative uncharacterized protein
           - Trypanosoma brucei
          Length = 123

 Score = 32.3 bits (70), Expect = 10.0
 Identities = 14/57 (24%), Positives = 30/57 (52%)
 Frame = +3

Query: 336 FVNTKLNNFITTLRFLTLNLPIVLVYVFLPTAFSNFDPKFIKRSILLFNKDHVCVFS 506
           F+N  +N+F        L + ++L Y+F+ +  S+F    + R+  LF+  H+ + +
Sbjct: 45  FINESINDFPVVSYMKLLGITLILAYLFIYSFVSDFHFSCVMRNRSLFSLFHIYILT 101


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 581,497,020
Number of Sequences: 1657284
Number of extensions: 11286325
Number of successful extensions: 23457
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 22854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23452
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46881492319
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)