Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0861
         (634 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1354 - 29520376-29520582,29520668-29520795,29521015-295210...    29   4.1  
03_01_0315 + 2480990-2481012,2481978-2482050,2482754-2482810,248...    28   7.1  
10_07_0079 + 12665141-12665167,12665613-12665702,12665783-126663...    27   9.4  
01_06_1140 - 34836967-34836996,34837107-34838771                       27   9.4  

>06_03_1354 -
           29520376-29520582,29520668-29520795,29521015-29521099,
           29521169-29521522
          Length = 257

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = -3

Query: 101 TADLSARTHKTSYQQYFITLLAVHGXL 21
           TADL AR  K  Y   F+T LA+ G L
Sbjct: 83  TADLEARIEKVIYACRFMTFLAIAGSL 109


>03_01_0315 +
           2480990-2481012,2481978-2482050,2482754-2482810,
           2483732-2483887
          Length = 102

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +3

Query: 330 YFFVNTKLNNFITTLRFLTLNLPIVLVYVFL-PT 428
           +F VN   NN I T+   TLNLP++ +   + PT
Sbjct: 49  FFIVNYTTNNMILTITRPTLNLPMLAMETIIGPT 82


>10_07_0079 +
           12665141-12665167,12665613-12665702,12665783-12666310,
           12666341-12667741
          Length = 681

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -1

Query: 151 TETHYCLTAEIGRAVDLRRTYPRGLTRRPTNS 56
           T  HYC   ++G    LR+   +GL   P+ S
Sbjct: 309 TAKHYCTLEDVGPVSQLRKLKLKGLENAPSKS 340


>01_06_1140 - 34836967-34836996,34837107-34838771
          Length = 564

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -1

Query: 289 GDELTAYLVLSGTAAHRHLQRKCCHPP*DMSSKS 188
           G E+  Y+V SG A H  L    C+   DM +KS
Sbjct: 325 GREVHGYIVTSGLACHGALDSFACNALVDMYAKS 358


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,545,722
Number of Sequences: 37544
Number of extensions: 307408
Number of successful extensions: 603
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 603
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1549385732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)