Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0860
         (675 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_03_0158 + 10911997-10912078,10912203-10912288,10913780-109138...   100   2e-21
11_03_0001 - 8844030-8845061,8845392-8845912,8845962-8845977           29   4.5  
04_04_0626 - 26686411-26686518,26686876-26686953,26687763-266878...    28   7.8  

>11_03_0158 +
           10911997-10912078,10912203-10912288,10913780-10913857,
           10913967-10914098,10914385-10914435,10914529-10914669,
           10914754-10914876,10914989-10915066,10915448-10915541,
           10915633-10915739,10915936-10916019,10916649-10916744,
           10916835-10917023,10917705-10917780,10918507-10918610,
           10918708-10918967,10920000-10920086,10920184-10920411,
           10920752-10920826,10921264-10921346,10921552-10921661
          Length = 787

 Score = 99.5 bits (237), Expect = 2e-21
 Identities = 43/85 (50%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
 Frame = +3

Query: 255 ESEVGPTDEKYDATIDTQEEHEMLQKLAAAK-EDQQFPDEVDTPQDIPARERFMRYRGLE 431
           E  +G T+   D  +  ++    ++K+  A  ED++FPDEV+TP D+PA+ RF +YRGL+
Sbjct: 438 EETIGGTEMADDENLTKEQIEAEIKKIKEANAEDEEFPDEVETPLDVPAKRRFAKYRGLK 497

Query: 432 SFRTSAWDVKENLPQDYSRIFQFEN 506
           SFRTS+WD KE+LPQDY+RIF F+N
Sbjct: 498 SFRTSSWDPKESLPQDYARIFAFDN 522



 Score = 57.2 bits (132), Expect = 1e-08
 Identities = 24/41 (58%), Positives = 34/41 (82%), Gaps = 1/41 (2%)
 Frame = +1

Query: 1   DAEQTWPTEEEIEQANLETQKKKIK-KVPKGWSDYQAAWIV 120
           + EQTWPTE E+E+A L  +++K+K K+P+G S+YQAAWIV
Sbjct: 349 EGEQTWPTEAEMEEAYLNNKQRKLKRKLPRGTSEYQAAWIV 389


>11_03_0001 - 8844030-8845061,8845392-8845912,8845962-8845977
          Length = 522

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 20/68 (29%), Positives = 29/68 (42%)
 Frame = +3

Query: 276 DEKYDATIDTQEEHEMLQKLAAAKEDQQFPDEVDTPQDIPARERFMRYRGLESFRTSAWD 455
           DE     +D  +  E+ +K    K DQQ  DE+   Q +  ++R     GL   R     
Sbjct: 375 DEAIPQRVDAHDNFEVNEKDGDGKIDQQLADEISNVQ-VSVQKRDEMQAGLTGGRKDDAA 433

Query: 456 VKENLPQD 479
             +N PQD
Sbjct: 434 APQN-PQD 440


>04_04_0626 -
           26686411-26686518,26686876-26686953,26687763-26687810,
           26688012-26688167,26688725-26688795,26689949-26690055,
           26690145-26691112
          Length = 511

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -1

Query: 357 ADLLLQLLTSATSHVLPECLLWHHTSHLW-VQPLIRNRFNIIEL 229
           A LL   L   +  VL E L WH  S +W V P++   + +++L
Sbjct: 229 AVLLGPYLLLLSVQVLTEMLTWHWKSPVWLVAPVVYEGYRVLQL 272


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,570,054
Number of Sequences: 37544
Number of extensions: 316753
Number of successful extensions: 978
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 971
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1714968940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)