Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0860
(675 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC126110-1|AAI26111.1| 804|Homo sapiens TSR1, 20S rRNA accumula... 108 2e-23
BC110851-1|AAI10852.1| 804|Homo sapiens TSR1, 20S rRNA accumula... 108 2e-23
BC019090-1|AAH19090.2| 759|Homo sapiens TSR1 protein protein. 108 2e-23
AK001396-1|BAA91667.1| 656|Homo sapiens protein ( Homo sapiens ... 108 2e-23
AB037822-1|BAA92639.1| 853|Homo sapiens KIAA1401 protein protein. 108 2e-23
Y08266-1|CAA69592.1| 191|Homo sapiens DAN15 protein. 30 6.5
EF064344-10|ABJ99458.1| 459|Homo sapiens NADH dehydrogenase sub... 30 6.5
AY275537-10|AAQ19469.1| 459|Homo sapiens NADH dehydrogenase sub... 30 6.5
AY275536-10|AAQ19456.1| 459|Homo sapiens NADH dehydrogenase sub... 30 6.5
AF521671-1|AAN03447.1| 2165|Homo sapiens SWI/SNF chromatin remod... 30 6.5
>BC126110-1|AAI26111.1| 804|Homo sapiens TSR1, 20S rRNA
accumulation, homolog (S. cerevisiae) protein.
Length = 804
Score = 108 bits (260), Expect = 2e-23
Identities = 46/77 (59%), Positives = 60/77 (77%)
Frame = +3
Query: 276 DEKYDATIDTQEEHEMLQKLAAAKEDQQFPDEVDTPQDIPARERFMRYRGLESFRTSAWD 455
D+ YD +D + E +ML+K + ++ FPDEVDTP+D+ AR RF +YRGL+SFRTS WD
Sbjct: 456 DDLYDKKVDEEAEAKMLEKYKQERLEEMFPDEVDTPRDVAARIRFQKYRGLKSFRTSPWD 515
Query: 456 VKENLPQDYSRIFQFEN 506
KENLPQDY+RIFQF+N
Sbjct: 516 PKENLPQDYARIFQFQN 532
Score = 54.4 bits (125), Expect = 4e-07
Identities = 24/42 (57%), Positives = 30/42 (71%), Gaps = 2/42 (4%)
Frame = +1
Query: 1 DAEQTWPTEEEIEQAN--LETQKKKIKKVPKGWSDYQAAWIV 120
+ EQTWPTEEE+ +A L+ K +KKVPKG S YQA WI+
Sbjct: 365 EGEQTWPTEEELSEAKDFLKESSKVVKKVPKGTSSYQAEWIL 406
Score = 30.3 bits (65), Expect = 6.5
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 515 TRKRVFKELEDSLVN--MYGFYIRIHVKGVHQDLWKAFSTANPNAPF 649
TRK +FKE+E+ V G+Y+ +HV V + + F P F
Sbjct: 536 TRKSIFKEVEEKEVEGAEVGWYVTLHVSEVPVSVVECFRQGTPLIAF 582
>BC110851-1|AAI10852.1| 804|Homo sapiens TSR1, 20S rRNA
accumulation, homolog (S. cerevisiae) protein.
Length = 804
Score = 108 bits (260), Expect = 2e-23
Identities = 46/77 (59%), Positives = 60/77 (77%)
Frame = +3
Query: 276 DEKYDATIDTQEEHEMLQKLAAAKEDQQFPDEVDTPQDIPARERFMRYRGLESFRTSAWD 455
D+ YD +D + E +ML+K + ++ FPDEVDTP+D+ AR RF +YRGL+SFRTS WD
Sbjct: 456 DDLYDKKVDEEAEAKMLEKYKQERLEEMFPDEVDTPRDVAARIRFQKYRGLKSFRTSPWD 515
Query: 456 VKENLPQDYSRIFQFEN 506
KENLPQDY+RIFQF+N
Sbjct: 516 PKENLPQDYARIFQFQN 532
Score = 54.4 bits (125), Expect = 4e-07
Identities = 24/42 (57%), Positives = 30/42 (71%), Gaps = 2/42 (4%)
Frame = +1
Query: 1 DAEQTWPTEEEIEQAN--LETQKKKIKKVPKGWSDYQAAWIV 120
+ EQTWPTEEE+ +A L+ K +KKVPKG S YQA WI+
Sbjct: 365 EGEQTWPTEEELSEAKDFLKESSKVVKKVPKGTSSYQAEWIL 406
Score = 30.3 bits (65), Expect = 6.5
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 515 TRKRVFKELEDSLVN--MYGFYIRIHVKGVHQDLWKAFSTANPNAPF 649
TRK +FKE+E+ V G+Y+ +HV V + + F P F
Sbjct: 536 TRKSIFKEVEEKEVEGAEVGWYVTLHVSEVPVSVVECFRQGTPLIAF 582
>BC019090-1|AAH19090.2| 759|Homo sapiens TSR1 protein protein.
Length = 759
Score = 108 bits (260), Expect = 2e-23
Identities = 46/77 (59%), Positives = 60/77 (77%)
Frame = +3
Query: 276 DEKYDATIDTQEEHEMLQKLAAAKEDQQFPDEVDTPQDIPARERFMRYRGLESFRTSAWD 455
D+ YD +D + E +ML+K + ++ FPDEVDTP+D+ AR RF +YRGL+SFRTS WD
Sbjct: 411 DDLYDKKVDEEAEAKMLEKYKQERLEEMFPDEVDTPRDVAARIRFQKYRGLKSFRTSPWD 470
Query: 456 VKENLPQDYSRIFQFEN 506
KENLPQDY+RIFQF+N
Sbjct: 471 PKENLPQDYARIFQFQN 487
Score = 53.6 bits (123), Expect = 6e-07
Identities = 24/42 (57%), Positives = 30/42 (71%), Gaps = 2/42 (4%)
Frame = +1
Query: 1 DAEQTWPTEEEIEQAN--LETQKKKIKKVPKGWSDYQAAWIV 120
+ EQTWPTEEE+ +A L+ K +KKVPKG S YQA WI+
Sbjct: 320 EGEQTWPTEEELSEAKDFLKEGSKVVKKVPKGTSSYQAEWIL 361
Score = 30.3 bits (65), Expect = 6.5
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 515 TRKRVFKELEDSLVN--MYGFYIRIHVKGVHQDLWKAFSTANPNAPF 649
TRK +FKE+E+ V G+Y+ +HV V + + F P F
Sbjct: 491 TRKSIFKEVEEKEVEGAEVGWYVTLHVSEVPVSVVECFRQGTPLIAF 537
>AK001396-1|BAA91667.1| 656|Homo sapiens protein ( Homo sapiens
cDNA FLJ10534 fis, clone NT2RP2001065. ).
Length = 656
Score = 108 bits (260), Expect = 2e-23
Identities = 46/77 (59%), Positives = 60/77 (77%)
Frame = +3
Query: 276 DEKYDATIDTQEEHEMLQKLAAAKEDQQFPDEVDTPQDIPARERFMRYRGLESFRTSAWD 455
D+ YD +D + E +ML+K + ++ FPDEVDTP+D+ AR RF +YRGL+SFRTS WD
Sbjct: 308 DDLYDKKVDEEAEAKMLEKYKQERLEEMFPDEVDTPRDVAARIRFQKYRGLKSFRTSPWD 367
Query: 456 VKENLPQDYSRIFQFEN 506
KENLPQDY+RIFQF+N
Sbjct: 368 PKENLPQDYARIFQFQN 384
Score = 54.4 bits (125), Expect = 4e-07
Identities = 24/42 (57%), Positives = 30/42 (71%), Gaps = 2/42 (4%)
Frame = +1
Query: 1 DAEQTWPTEEEIEQAN--LETQKKKIKKVPKGWSDYQAAWIV 120
+ EQTWPTEEE+ +A L+ K +KKVPKG S YQA WI+
Sbjct: 217 EGEQTWPTEEELSEAKDFLKESSKVVKKVPKGTSSYQAEWIL 258
Score = 30.3 bits (65), Expect = 6.5
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 515 TRKRVFKELEDSLVN--MYGFYIRIHVKGVHQDLWKAFSTANPNAPF 649
TRK +FKE+E+ V G+Y+ +HV V + + F P F
Sbjct: 388 TRKSIFKEVEEKEVEGAEVGWYVTLHVSEVPVSVVECFRQGTPLIAF 434
>AB037822-1|BAA92639.1| 853|Homo sapiens KIAA1401 protein protein.
Length = 853
Score = 108 bits (260), Expect = 2e-23
Identities = 46/77 (59%), Positives = 60/77 (77%)
Frame = +3
Query: 276 DEKYDATIDTQEEHEMLQKLAAAKEDQQFPDEVDTPQDIPARERFMRYRGLESFRTSAWD 455
D+ YD +D + E +ML+K + ++ FPDEVDTP+D+ AR RF +YRGL+SFRTS WD
Sbjct: 505 DDLYDKKVDEEAEAKMLEKYKQERLEEMFPDEVDTPRDVAARIRFQKYRGLKSFRTSPWD 564
Query: 456 VKENLPQDYSRIFQFEN 506
KENLPQDY+RIFQF+N
Sbjct: 565 PKENLPQDYARIFQFQN 581
Score = 54.4 bits (125), Expect = 4e-07
Identities = 24/42 (57%), Positives = 30/42 (71%), Gaps = 2/42 (4%)
Frame = +1
Query: 1 DAEQTWPTEEEIEQAN--LETQKKKIKKVPKGWSDYQAAWIV 120
+ EQTWPTEEE+ +A L+ K +KKVPKG S YQA WI+
Sbjct: 414 EGEQTWPTEEELSEAKDFLKESSKVVKKVPKGTSSYQAEWIL 455
Score = 30.3 bits (65), Expect = 6.5
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 515 TRKRVFKELEDSLVN--MYGFYIRIHVKGVHQDLWKAFSTANPNAPF 649
TRK +FKE+E+ V G+Y+ +HV V + + F P F
Sbjct: 585 TRKSIFKEVEEKEVEGAEVGWYVTLHVSEVPVSVVECFRQGTPLIAF 631
>Y08266-1|CAA69592.1| 191|Homo sapiens DAN15 protein.
Length = 191
Score = 30.3 bits (65), Expect = 6.5
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -3
Query: 220 PLDQNYHLHKT*THRFLSHLHYQTHHHLPRHQIRQSKQLGNQ 95
P Q++H H H H H+ HHH + Q+ Q +Q Q
Sbjct: 72 PHQQHHHHHHA--HHHHHHAHHLHHHHALQQQLNQFQQQQQQ 111
>EF064344-10|ABJ99458.1| 459|Homo sapiens NADH dehydrogenase
subunit 4 protein.
Length = 459
Score = 30.3 bits (65), Expect = 6.5
Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Frame = -1
Query: 357 ADLLLQLLTSATSHVLPECLLWHHTSHLWVQPLIRNRFNIIELFIVLWIRIII-FTRHKL 181
+D L L T+ +LP ++ HL+ +PL R + + + I L I +I+ FT +L
Sbjct: 58 SDPLTTPLLMLTTWLLPLTIMASQR-HLFSEPLSRKKL-YLSMLISLQISLIMTFTATEL 115
Query: 180 IVFFLISTIRLI-TIFLGIRFDNPSSLVIRPTFGYFLDFFLL 58
I+F++ LI T+ + R+ N + T YFL + L+
Sbjct: 116 IMFYIFFETTLIPTLAIITRWGNQPERLNAGT--YFLFYTLV 155
>AY275537-10|AAQ19469.1| 459|Homo sapiens NADH dehydrogenase
subunit 4 protein.
Length = 459
Score = 30.3 bits (65), Expect = 6.5
Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Frame = -1
Query: 357 ADLLLQLLTSATSHVLPECLLWHHTSHLWVQPLIRNRFNIIELFIVLWIRIII-FTRHKL 181
+D L L T+ +LP ++ HL+ +PL R + + + I L I +I+ FT +L
Sbjct: 58 SDPLTTPLLMLTTWLLPLTIMASQR-HLFSEPLSRKKL-YLSMLISLQISLIMTFTATEL 115
Query: 180 IVFFLISTIRLI-TIFLGIRFDNPSSLVIRPTFGYFLDFFLL 58
I+F++ LI T+ + R+ N + T YFL + L+
Sbjct: 116 IMFYIFFETTLIPTLAIITRWGNQPERLNAGT--YFLFYTLV 155
>AY275536-10|AAQ19456.1| 459|Homo sapiens NADH dehydrogenase
subunit 4 protein.
Length = 459
Score = 30.3 bits (65), Expect = 6.5
Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Frame = -1
Query: 357 ADLLLQLLTSATSHVLPECLLWHHTSHLWVQPLIRNRFNIIELFIVLWIRIII-FTRHKL 181
+D L L T+ +LP ++ HL+ +PL R + + + I L I +I+ FT +L
Sbjct: 58 SDPLTTPLLMLTTWLLPLTIMASQR-HLFSEPLSRKKL-YLSMLISLQISLIMTFTATEL 115
Query: 180 IVFFLISTIRLI-TIFLGIRFDNPSSLVIRPTFGYFLDFFLL 58
I+F++ LI T+ + R+ N + T YFL + L+
Sbjct: 116 IMFYIFFETTLIPTLAIITRWGNQPERLNAGT--YFLFYTLV 155
>AF521671-1|AAN03447.1| 2165|Homo sapiens SWI/SNF chromatin
remodeling complex subunit OSA2 protein.
Length = 2165
Score = 30.3 bits (65), Expect = 6.5
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -3
Query: 220 PLDQNYHLHKT*THRFLSHLHYQTHHHLPRHQIRQSKQLGNQ 95
P Q++H H H H H+ HHH + Q+ Q +Q Q
Sbjct: 9 PHQQHHHHHHA--HHHHHHAHHLHHHHALQQQLNQFQQQQQQ 48
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,155,269
Number of Sequences: 237096
Number of extensions: 1769404
Number of successful extensions: 8638
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8538
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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