Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0860
         (675 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40029-12|AAA81131.1|  785|Caenorhabditis elegans Temporarily as...    95   4e-20
U21322-6|AAN65314.2|  669|Caenorhabditis elegans Hypothetical pr...    29   3.0  
U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical pr...    29   3.0  
AF036700-4|AAV34787.1|  437|Caenorhabditis elegans Hypothetical ...    28   7.0  
AF036700-3|AAB88366.2|  479|Caenorhabditis elegans Hypothetical ...    28   7.0  
AF024494-9|AAB70333.1|  336|Caenorhabditis elegans Serpentine re...    28   7.0  
AC006673-2|AAF39928.1|  300|Caenorhabditis elegans Serpentine re...    28   7.0  
Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical pr...    27   9.2  
Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical pr...    27   9.2  
AF039049-6|AAB94249.2|  301|Caenorhabditis elegans Serpentine re...    27   9.2  

>U40029-12|AAA81131.1|  785|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 151 protein.
          Length = 785

 Score = 95.1 bits (226), Expect = 4e-20
 Identities = 46/87 (52%), Positives = 58/87 (66%), Gaps = 3/87 (3%)
 Frame = +3

Query: 255 ESEVGPT---DEKYDATIDTQEEHEMLQKLAAAKEDQQFPDEVDTPQDIPARERFMRYRG 425
           +SE G T   +  +D  ID       ++K    +E+ Q+PDEVDTP D+PAR  F +YRG
Sbjct: 413 KSEAGETTASEMMFDDGIDEDINMAEVEKYRKERENAQWPDEVDTPMDMPARIAFQKYRG 472

Query: 426 LESFRTSAWDVKENLPQDYSRIFQFEN 506
           L+SFRTS WD KENLP DY+RIFQF N
Sbjct: 473 LKSFRTSTWDPKENLPLDYARIFQFAN 499



 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 23/40 (57%), Positives = 31/40 (77%)
 Frame = +1

Query: 1   DAEQTWPTEEEIEQANLETQKKKIKKVPKGWSDYQAAWIV 120
           D EQTWPT EE+E+A+     K++++VPKG S YQAAWI+
Sbjct: 342 DGEQTWPTREELEEAD-----KELRRVPKGTSSYQAAWIL 376


>U21322-6|AAN65314.2|  669|Caenorhabditis elegans Hypothetical
           protein K10D2.1b protein.
          Length = 669

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 10/23 (43%), Positives = 18/23 (78%)
 Frame = +1

Query: 196 EDDNSDPEDDKQFNDIESVTNQR 264
           +DD+ + E+D + +DIESV N++
Sbjct: 528 DDDDEEEEEDMEISDIESVRNKK 550


>U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical
           protein K10D2.1a protein.
          Length = 1223

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 10/23 (43%), Positives = 18/23 (78%)
 Frame = +1

Query: 196 EDDNSDPEDDKQFNDIESVTNQR 264
           +DD+ + E+D + +DIESV N++
Sbjct: 816 DDDDEEEEEDMEISDIESVRNKK 838


>AF036700-4|AAV34787.1|  437|Caenorhabditis elegans Hypothetical
           protein M04G7.3b protein.
          Length = 437

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
 Frame = -1

Query: 258 IRNRFNIIEL---FIVLWIRIIIFTRHKLIVFFLISTIRLITIFLGIRFDNPSSLVIRPT 88
           I+  +NI EL   F + ++ I+I     + +FF  +T +   +   +   NP   V R +
Sbjct: 186 IKRHYNIRELIRPFYIPFLLILISFSVNIPIFFEFTTTKCFNVEHNVEATNPEPTVFRSS 245

Query: 87  FGYF 76
           F  +
Sbjct: 246 FAKY 249


>AF036700-3|AAB88366.2|  479|Caenorhabditis elegans Hypothetical
           protein M04G7.3a protein.
          Length = 479

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
 Frame = -1

Query: 258 IRNRFNIIEL---FIVLWIRIIIFTRHKLIVFFLISTIRLITIFLGIRFDNPSSLVIRPT 88
           I+  +NI EL   F + ++ I+I     + +FF  +T +   +   +   NP   V R +
Sbjct: 228 IKRHYNIRELIRPFYIPFLLILISFSVNIPIFFEFTTTKCFNVEHNVEATNPEPTVFRSS 287

Query: 87  FGYF 76
           F  +
Sbjct: 288 FAKY 291


>AF024494-9|AAB70333.1|  336|Caenorhabditis elegans Serpentine
           receptor, class u protein27 protein.
          Length = 336

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 20/72 (27%), Positives = 35/72 (48%)
 Frame = -1

Query: 225 IVLWIRIIIFTRHKLIVFFLISTIRLITIFLGIRFDNPSSLVIRPTFGYFLDFFLLCL*I 46
           +VL+I         +I  FL+ST+RL+ I    R +  + ++++      L F L+    
Sbjct: 113 MVLYISTYYVNYANMIFPFLVSTMRLVLIAYPQRQEKINRVILKSA----LPFILI---Y 165

Query: 45  SLFNFFFSWPGL 10
            +F  FF WP +
Sbjct: 166 PMFFTFFMWPAV 177


>AC006673-2|AAF39928.1|  300|Caenorhabditis elegans Serpentine
           receptor, class x protein62 protein.
          Length = 300

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 12/29 (41%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = -2

Query: 356 LIFFCSC*LLQH-LMFFLSVYCGIILLIC 273
           L++FC   LL + +M  +S +CG +LL+C
Sbjct: 62  LLYFCPMVLLDNAIMKEMSHHCGFVLLLC 90


>Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical
           protein K09C8.5 protein.
          Length = 1328

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 12/43 (27%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
 Frame = +3

Query: 288 DATID--TQEEHEMLQKLAAAKEDQQFPDEVDTPQDIPARERF 410
           D+TI+   +E  + ++K  ++ +DQQ  D++++P D+    +F
Sbjct: 547 DSTIEKIAKEAKQKVEKALSSTKDQQRMDKIESPNDLSKLFKF 589


>Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical
           protein K09C8.5 protein.
          Length = 1328

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 12/43 (27%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
 Frame = +3

Query: 288 DATID--TQEEHEMLQKLAAAKEDQQFPDEVDTPQDIPARERF 410
           D+TI+   +E  + ++K  ++ +DQQ  D++++P D+    +F
Sbjct: 547 DSTIEKIAKEAKQKVEKALSSTKDQQRMDKIESPNDLSKLFKF 589


>AF039049-6|AAB94249.2|  301|Caenorhabditis elegans Serpentine
           receptor, class x protein64 protein.
          Length = 301

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -2

Query: 356 LIFFCSC*LLQH-LMFFLSVYCGIILLIC 273
           LIFFC   LL    +  +S +CG +LL+C
Sbjct: 58  LIFFCPMVLLDEPTLKAMSHHCGFVLLLC 86


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,758,843
Number of Sequences: 27780
Number of extensions: 297760
Number of successful extensions: 1175
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1173
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)