Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0858
         (640 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    23   1.6  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   5.0  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   8.7  

>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 13/36 (36%), Positives = 15/36 (41%)
 Frame = -1

Query: 613 SNPKYLALASGSSNTHCSRCLTFLVTEWPSICXSFY 506
           S PK   L     + HC R   +   E P IC  FY
Sbjct: 94  SRPK---LQEPQPSQHCPRKHGYFAHEEPHICDKFY 126


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 72  FFSLYFILDICGACNFC 22
           F+S +FI+++   CN C
Sbjct: 274 FWSAFFIVNVLYICNQC 290


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
          peptide receptor 1 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -3

Query: 56 LFWISVVLVTSANVGL 9
          L W+  V++ + NVG+
Sbjct: 30 LLWVLFVIIVAGNVGV 45


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,561
Number of Sequences: 336
Number of extensions: 2715
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)