Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0858
         (640 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3352|AAF56159.2|  350|Drosophila melanogaster CG16710-P...    30   3.0  
AY070973-1|AAL48595.1|  349|Drosophila melanogaster RE07395p pro...    29   7.0  
AE014297-1913|AAF55108.2|  349|Drosophila melanogaster CG33332-P...    29   7.0  

>AE014297-3352|AAF56159.2|  350|Drosophila melanogaster CG16710-PA
           protein.
          Length = 350

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = -3

Query: 182 LFLENLH*IFLLLHCSLF*YFSE*KSPQWQLPARCVCSSVC 60
           +FL+ ++  FL+LH  L  Y +E + P   L  +C+  + C
Sbjct: 2   VFLQRVYISFLVLHTQLLMYLAESEYPPCNLDEKCISLARC 42


>AY070973-1|AAL48595.1|  349|Drosophila melanogaster RE07395p
           protein.
          Length = 349

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 1/85 (1%)
 Frame = +1

Query: 256 GPXLPPHLQDRYXXXXXXXXXXTGIQTSTNMGPSIPDDM-RKVLATRGVIKYXSSDEDSC 432
           GP LPPHL+ +              Q    +GP +P ++ R+   T+        D    
Sbjct: 87  GPALPPHLR-KTQQPELPEQSQPAPQPQAMIGPVLPSNLTREKSPTKEAEAEDDDDLAGT 145

Query: 433 VGPLPVGSEQKYSDAHKRLEERALD 507
            GPLP  S+    +    L+  AL+
Sbjct: 146 FGPLPNASQVALEERALALKLAALE 170


>AE014297-1913|AAF55108.2|  349|Drosophila melanogaster CG33332-PA
           protein.
          Length = 349

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 1/85 (1%)
 Frame = +1

Query: 256 GPXLPPHLQDRYXXXXXXXXXXTGIQTSTNMGPSIPDDM-RKVLATRGVIKYXSSDEDSC 432
           GP LPPHL+ +              Q    +GP +P ++ R+   T+        D    
Sbjct: 87  GPALPPHLR-KTQQPELPEQSQPAPQPQAMIGPVLPSNLTREKSPTKEAEAEDDDDLAGT 145

Query: 433 VGPLPVGSEQKYSDAHKRLEERALD 507
            GPLP  S+    +    L+  AL+
Sbjct: 146 FGPLPNASQVALEERALALKLAALE 170


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,064,426
Number of Sequences: 53049
Number of extensions: 503714
Number of successful extensions: 1092
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1092
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)