Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0856
         (744 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    25   0.64 
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    22   4.5  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   6.0  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   6.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   6.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   6.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   6.0  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   6.0  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   6.0  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   7.9  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 181 KDVKLENGNAPGASNGTSSKSEDNA 255
           K VK  NGN    S+ + S SE+N+
Sbjct: 392 KHVKTHNGNGKKGSSDSCSDSEENS 416


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +1

Query: 235 SKSEDNAYLSRKPSRRFPNLEIPSPMEKPS 324
           ++ E N Y ++K +   P    P+PM  P+
Sbjct: 295 AQEEANLYAAKKAAGASPYSGTPTPMMSPA 324


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 442 DDYQKFLDDLAKNKKVELDE 501
           D Y+KF +  +KN K+ + E
Sbjct: 421 DGYKKFYEQFSKNIKLGIHE 440


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 474 REII*KLLVVVDAEFYRFE 418
           R +  K L VVD ++Y FE
Sbjct: 594 RRVAQKYLRVVDPDYYEFE 612


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 474 REII*KLLVVVDAEFYRFE 418
           R +  K L VVD ++Y FE
Sbjct: 594 RRVAQKYLRVVDPDYYEFE 612


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 474 REII*KLLVVVDAEFYRFE 418
           R +  K L VVD ++Y FE
Sbjct: 594 RRVAQKYLRVVDPDYYEFE 612


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 474 REII*KLLVVVDAEFYRFE 418
           R +  K L VVD ++Y FE
Sbjct: 594 RRVAQKYLRVVDPDYYEFE 612


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 535 PGWPQVVNFS*FRQVPLFCSSRDHL 461
           P  P  V+++ F  VPL  ++ DHL
Sbjct: 177 PFLPSDVSYNLFSFVPLVVNALDHL 201


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 535 PGWPQVVNFS*FRQVPLFCSSRDHL 461
           P  P  V+++ F  VPL  ++ DHL
Sbjct: 133 PFLPSDVSYNLFSFVPLVVNALDHL 157


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/24 (37%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
 Frame = +2

Query: 542 ITRYKITGS-RSGRRSIDRHKQIY 610
           IT Y +      GR+ + +H+QIY
Sbjct: 11  ITDYDLNNEFYRGRKKLSKHQQIY 34


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,226
Number of Sequences: 336
Number of extensions: 3550
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)